RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	SMIM10	Q96HG1	83 aa		20.78	■□□□□ 0.92
LTBP4-227	ENST00000600026	ZNF304	Q9HCX3	659 aa		20.78	■□□□□ 0.92
LTBP4-227	ENST00000600026	IFT80	Q9P2H3	777 aa	Predicted RBP	20.78	■□□□□ 0.92
LTBP4-227	ENST00000600026	GIMAP2	Q9UG22	337 aa		20.78	■□□□□ 0.92
LTBP4-227	ENST00000600026	ADAM29	Q9UKF5	820 aa		20.78	■□□□□ 0.92
LTBP4-227	ENST00000600026	EIF3L	Q9Y262	564 aa	Known RBP	20.78	■□□□□ 0.92
LTBP4-227	ENST00000600026	CCDC88C	Q9P219	2028 aa		20.78	■□□□□ 0.92
LTBP4-227	ENST00000600026	IGF2R	P11717	2491 aa		20.77	■□□□□ 0.92
LTBP4-227	ENST00000600026	ARHGAP10	A1A4S6	786 aa		20.77	■□□□□ 0.92
LTBP4-227	ENST00000600026		C9J4A7	227 aa		20.77	■□□□□ 0.92
LTBP4-227	ENST00000600026	NDUFAB1	O14561	156 aa		20.77	■□□□□ 0.92
LTBP4-227	ENST00000600026	KLHL18	O94889	574 aa		20.77	■□□□□ 0.92
LTBP4-227	ENST00000600026	B3GALT4	O96024	378 aa		20.77	■□□□□ 0.92
LTBP4-227	ENST00000600026	PRR35	P0CG20	571 aa		20.77	■□□□□ 0.92
LTBP4-227	ENST00000600026	TCN2	P20062	427 aa		20.77	■□□□□ 0.92
LTBP4-227	ENST00000600026	FBL	P22087	321 aa	Known RBP	20.77	■□□□□ 0.92
LTBP4-227	ENST00000600026	ERVK-8	P63133	956 aa		20.77	■□□□□ 0.92
LTBP4-227	ENST00000600026	EMX2	Q04743	252 aa		20.77	■□□□□ 0.92
LTBP4-227	ENST00000600026	DEFB134	Q4QY38	66 aa		20.77	■□□□□ 0.92
LTBP4-227	ENST00000600026	OGFOD2	Q6N063	350 aa		20.77	■□□□□ 0.92
LTBP4-227	ENST00000600026	COMMD6	Q7Z4G1	85 aa		20.77	■□□□□ 0.92
LTBP4-227	ENST00000600026	BCAS4	Q8TDM0	211 aa		20.77	■□□□□ 0.92
LTBP4-227	ENST00000600026	COL26A1	Q96A83	441 aa		20.77	■□□□□ 0.92
LTBP4-227	ENST00000600026	KIAA1143	Q96AT1	154 aa	Predicted RBP	20.77	■□□□□ 0.92
LTBP4-227	ENST00000600026	SIRT5	Q9NXA8	310 aa		20.77	■□□□□ 0.92
LTBP4-227	ENST00000600026	TRIM33	Q9UPN9	1127 aa		20.77	■□□□□ 0.92
LTBP4-227	ENST00000600026	NAALAD2	Q9Y3Q0	740 aa		20.77	■□□□□ 0.92
LTBP4-227	ENST00000600026	FREM2	Q5SZK8	3169 aa		20.77	■□□□□ 0.92
LTBP4-227	ENST00000600026	ZZEF1	O43149	2961 aa		20.77	■□□□□ 0.92
LTBP4-227	ENST00000600026	NUP210L	Q5VU65	1888 aa		20.77	■□□□□ 0.92
LTBP4-227	ENST00000600026	FAM208B	Q5VWN6	2430 aa		20.76	■□□□□ 0.91
LTBP4-227	ENST00000600026	ACACA	Q13085	2346 aa		20.76	■□□□□ 0.91
LTBP4-227	ENST00000600026		A0A0G2JN53	185 aa		20.76	■□□□□ 0.91
LTBP4-227	ENST00000600026		H0YIG0	161 aa		20.76	■□□□□ 0.91
LTBP4-227	ENST00000600026	SGK494	L7N484	410 aa		20.76	■□□□□ 0.91
LTBP4-227	ENST00000600026	RTCA	O00442	366 aa	Known RBP	20.76	■□□□□ 0.91
LTBP4-227	ENST00000600026	GALR3	O60755	368 aa	Predicted RBP	20.76	■□□□□ 0.91
LTBP4-227	ENST00000600026	RDH16	O75452	317 aa		20.76	■□□□□ 0.91
LTBP4-227	ENST00000600026	PIM1	P11309	404 aa	Predicted RBP	20.76	■□□□□ 0.91
LTBP4-227	ENST00000600026	F8A1	P23610	371 aa		20.76	■□□□□ 0.91
LTBP4-227	ENST00000600026	BSG	P35613	385 aa		20.76	■□□□□ 0.91
LTBP4-227	ENST00000600026	BTN3A2	P78410	334 aa		20.76	■□□□□ 0.91
LTBP4-227	ENST00000600026	DSG2	Q14126	1118 aa		20.76	■□□□□ 0.91
LTBP4-227	ENST00000600026	NCF4	Q15080	339 aa		20.76	■□□□□ 0.91
LTBP4-227	ENST00000600026	RFTN2	Q52LD8	501 aa	Predicted RBP	20.76	■□□□□ 0.91
LTBP4-227	ENST00000600026	LRRC69	Q6ZNQ3	347 aa		20.76	■□□□□ 0.91
LTBP4-227	ENST00000600026	UBE3D	Q7Z6J8	389 aa		20.76	■□□□□ 0.91
LTBP4-227	ENST00000600026	AMER3	Q8N944	861 aa		20.76	■□□□□ 0.91
LTBP4-227	ENST00000600026	FKBP10	Q96AY3	582 aa		20.76	■□□□□ 0.91
LTBP4-227	ENST00000600026	GPN2	Q9H9Y4	310 aa	Predicted RBP	20.76	■□□□□ 0.91
LTBP4-227	ENST00000600026	PRDM7	Q9NQW5	492 aa		20.76	■□□□□ 0.91
LTBP4-227	ENST00000600026	NOP53	Q9NZM5	478 aa	Known RBP	20.76	■□□□□ 0.91
LTBP4-227	ENST00000600026	GPN3	Q9UHW5	284 aa	Predicted RBP	20.76	■□□□□ 0.91
LTBP4-227	ENST00000600026	MCM8	Q9UJA3	840 aa		20.76	■□□□□ 0.91
LTBP4-227	ENST00000600026	ZFYVE26	Q68DK2	2539 aa		20.75	■□□□□ 0.91
LTBP4-227	ENST00000600026	ZNF860	A6NHJ4	632 aa		20.75	■□□□□ 0.91
LTBP4-227	ENST00000600026	C21orf140	B9A014	251 aa		20.75	■□□□□ 0.91
LTBP4-227	ENST00000600026		E9PBE3	544 aa		20.75	■□□□□ 0.91
LTBP4-227	ENST00000600026	UBD	O15205	165 aa		20.75	■□□□□ 0.91
LTBP4-227	ENST00000600026	PCDH7	O60245	1069 aa		20.75	■□□□□ 0.91
LTBP4-227	ENST00000600026	KLHL41	O60662	606 aa		20.75	■□□□□ 0.91
LTBP4-227	ENST00000600026	RAB40AL	P0C0E4	278 aa		20.75	■□□□□ 0.91
LTBP4-227	ENST00000600026	ACPP	P15309	386 aa		20.75	■□□□□ 0.91
LTBP4-227	ENST00000600026	HIST1H1T	P22492	207 aa	Predicted RBP	20.75	■□□□□ 0.91
LTBP4-227	ENST00000600026	TIA1	P31483	386 aa	Known RBP eCLIP	20.75	■□□□□ 0.91
LTBP4-227	ENST00000600026	MTTP	P55157	894 aa		20.75	■□□□□ 0.91
LTBP4-227	ENST00000600026	KIAA0040	Q15053	153 aa		20.75	■□□□□ 0.91
LTBP4-227	ENST00000600026	CCNYL2	Q5T2Q4	361 aa		20.75	■□□□□ 0.91
LTBP4-227	ENST00000600026	MLIP	Q5VWP3	458 aa		20.75	■□□□□ 0.91
LTBP4-227	ENST00000600026	METTL21C	Q5VZV1	264 aa		20.75	■□□□□ 0.91
LTBP4-227	ENST00000600026	NOXRED1	Q6NXP6	359 aa		20.75	■□□□□ 0.91
LTBP4-227	ENST00000600026	MRPL14	Q6P1L8	145 aa	Known RBP	20.75	■□□□□ 0.91
LTBP4-227	ENST00000600026	GALNT18	Q6P9A2	607 aa		20.75	■□□□□ 0.91
LTBP4-227	ENST00000600026	CYP20A1	Q6UW02	462 aa		20.75	■□□□□ 0.91
LTBP4-227	ENST00000600026	ENDOV	Q8N8Q3	282 aa	Known RBP	20.75	■□□□□ 0.91
LTBP4-227	ENST00000600026	SERINC2	Q96SA4	455 aa		20.75	■□□□□ 0.91
LTBP4-227	ENST00000600026	C1orf50	Q9BV19	199 aa		20.75	■□□□□ 0.91
LTBP4-227	ENST00000600026	SORBS1	Q9BX66	1292 aa	Known RBP	20.75	■□□□□ 0.91
LTBP4-227	ENST00000600026	DDX31	Q9H8H2	851 aa	Known RBP	20.75	■□□□□ 0.91
LTBP4-227	ENST00000600026	IL17B	Q9UHF5	180 aa		20.75	■□□□□ 0.91
LTBP4-227	ENST00000600026	SSUH2	Q9Y2M2	353 aa		20.75	■□□□□ 0.91
LTBP4-227	ENST00000600026	ARL2BP	Q9Y2Y0	163 aa		20.75	■□□□□ 0.91
LTBP4-227	ENST00000600026	POLR3H	Q9Y535	204 aa	Predicted RBP	20.75	■□□□□ 0.91
LTBP4-227	ENST00000600026		A0A087WV48	116 aa		20.74	■□□□□ 0.91
LTBP4-227	ENST00000600026	GNG14	A0A1W2PPG7	69 aa		20.74	■□□□□ 0.91
LTBP4-227	ENST00000600026	B3GALT2	O43825	422 aa		20.74	■□□□□ 0.91
LTBP4-227	ENST00000600026	CNOT3	O75175	753 aa	Known RBP	20.74	■□□□□ 0.91
LTBP4-227	ENST00000600026	KLK1	P06870	262 aa		20.74	■□□□□ 0.91
LTBP4-227	ENST00000600026	ANXA4	P09525	319 aa	Predicted RBP	20.74	■□□□□ 0.91
LTBP4-227	ENST00000600026	PRPS2	P11908	318 aa		20.74	■□□□□ 0.91
LTBP4-227	ENST00000600026	PCSK2	P16519	638 aa		20.74	■□□□□ 0.91
LTBP4-227	ENST00000600026	ATP5A1	P25705	553 aa	Known RBP	20.74	■□□□□ 0.91
LTBP4-227	ENST00000600026	MAT1A	Q00266	395 aa	Known RBP	20.74	■□□□□ 0.91
LTBP4-227	ENST00000600026	SYT16	Q17RD7	645 aa		20.74	■□□□□ 0.91
LTBP4-227	ENST00000600026	IL23R	Q5VWK5	629 aa		20.74	■□□□□ 0.91
LTBP4-227	ENST00000600026	OVCH1	Q7RTY7	1134 aa		20.74	■□□□□ 0.91
LTBP4-227	ENST00000600026	FCRL1	Q96LA6	429 aa		20.74	■□□□□ 0.91
LTBP4-227	ENST00000600026	CCNL2	Q96S94	520 aa	Predicted RBP	20.74	■□□□□ 0.91
LTBP4-227	ENST00000600026	EFHD1	Q9BUP0	239 aa		20.74	■□□□□ 0.91
LTBP4-227	ENST00000600026	ZNF717	Q9BY31	904 aa	Predicted RBP	20.74	■□□□□ 0.91

Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms