RNA–Protein interactions for RNA: ENST00000599680.1

IRF3-224, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-224ENST00000599680 MTHFD2P13995 350 aa13.41□□□□□ -0.26
IRF3-224ENST00000599680 EEF1DP29692 281 aaKnown RBP13.41□□□□□ -0.26
IRF3-224ENST00000599680 ST13P50502 369 aaKnown RBP13.41□□□□□ -0.26
IRF3-224ENST00000599680 LIM2P55344 173 aa13.41□□□□□ -0.26
IRF3-224ENST00000599680 PER3P56645 1201 aa13.41□□□□□ -0.26
IRF3-224ENST00000599680 STX4Q12846 297 aa13.41□□□□□ -0.26
IRF3-224ENST00000599680 OR1C1Q15619 314 aa13.41□□□□□ -0.26
IRF3-224ENST00000599680 TSNAXIP1Q2TAA8 658 aa13.41□□□□□ -0.26
IRF3-224ENST00000599680 GRHL2Q6ISB3 625 aa13.41□□□□□ -0.26
IRF3-224ENST00000599680 CLNKQ7Z7G1 428 aa13.41□□□□□ -0.26
IRF3-224ENST00000599680 IFT20Q8IY31 132 aa13.41□□□□□ -0.26
IRF3-224ENST00000599680 LAS2Q8IYD9 372 aa13.41□□□□□ -0.26
IRF3-224ENST00000599680 TMEM178AQ8NBL3 297 aa13.41□□□□□ -0.26
IRF3-224ENST00000599680 B3GNT7Q8NFL0 401 aa13.41□□□□□ -0.26
IRF3-224ENST00000599680 OR7G3Q8NG95 312 aa13.41□□□□□ -0.26
IRF3-224ENST00000599680 ZNF473Q8WTR7 871 aaKnown RBP13.41□□□□□ -0.26
IRF3-224ENST00000599680 NR4A3Q92570 626 aa13.41□□□□□ -0.26
IRF3-224ENST00000599680 PSMG3-AS1Q96PY0 264 aa13.41□□□□□ -0.26
IRF3-224ENST00000599680 TAAR6Q96RI8 345 aa13.41□□□□□ -0.26
IRF3-224ENST00000599680 SLX1AQ9BQ83 275 aa13.41□□□□□ -0.26
IRF3-224ENST00000599680 FUT8Q9BYC5 575 aa13.41□□□□□ -0.26
IRF3-224ENST00000599680 KLHL1Q9NR64 748 aa13.41□□□□□ -0.26
IRF3-224ENST00000599680 TMCO1Q9UM00 188 aa13.41□□□□□ -0.26
IRF3-224ENST00000599680 NFU1Q9UMS0 254 aa13.41□□□□□ -0.26
IRF3-224ENST00000599680 PCDHGA11Q9Y5H2 935 aa13.41□□□□□ -0.26
IRF3-224ENST00000599680 TRBV11-1A0A0K0K1C0 115 aa13.4□□□□□ -0.26
IRF3-224ENST00000599680 EXOC1LA0A1B0GW35 172 aa13.4□□□□□ -0.26
IRF3-224ENST00000599680 SAP18O00422 153 aaKnown RBP13.4□□□□□ -0.26
IRF3-224ENST00000599680 MLYCDO95822 493 aa13.4□□□□□ -0.26
IRF3-224ENST00000599680 TBX6O95947 436 aaPredicted RBP13.4□□□□□ -0.26
IRF3-224ENST00000599680 CD96P40200 585 aa13.4□□□□□ -0.26
IRF3-224ENST00000599680 CLCN2P51788 898 aa13.4□□□□□ -0.26
IRF3-224ENST00000599680 HNRNPFP52597 415 aaKnown RBP13.4□□□□□ -0.26
IRF3-224ENST00000599680 GTF2H2Q13888 395 aa13.4□□□□□ -0.26
IRF3-224ENST00000599680 E2F2Q14209 437 aa13.4□□□□□ -0.26
IRF3-224ENST00000599680 TERF2Q15554 542 aa13.4□□□□□ -0.26
IRF3-224ENST00000599680 TECRLQ5HYJ1 363 aa13.4□□□□□ -0.26
IRF3-224ENST00000599680 LGSNQ5TDP6 509 aa13.4□□□□□ -0.26
IRF3-224ENST00000599680 KHDRBS2Q5VWX1 349 aaKnown RBP13.4□□□□□ -0.26
IRF3-224ENST00000599680 LIPJQ5W064 366 aa13.4□□□□□ -0.26
IRF3-224ENST00000599680 GTF2H2CQ6P1K8 395 aa13.4□□□□□ -0.26
IRF3-224ENST00000599680 GFRALQ6UXV0 394 aa13.4□□□□□ -0.26
IRF3-224ENST00000599680 SCUBE1Q8IWY4 988 aa13.4□□□□□ -0.26
IRF3-224ENST00000599680 ACOT4Q8N9L9 421 aa13.4□□□□□ -0.26
IRF3-224ENST00000599680 FAM98AQ8NCA5 519 aaKnown RBP13.4□□□□□ -0.26
IRF3-224ENST00000599680 ATP6V1E2Q96A05 226 aa13.4□□□□□ -0.26
IRF3-224ENST00000599680 TMEM125Q96AQ2 219 aa13.4□□□□□ -0.26
IRF3-224ENST00000599680 RGMAQ96B86 450 aa13.4□□□□□ -0.26
IRF3-224ENST00000599680 VMP1Q96GC9 406 aa13.4□□□□□ -0.26
IRF3-224ENST00000599680 SIGLEC12Q96PQ1 595 aa13.4□□□□□ -0.26
IRF3-224ENST00000599680 NPAS2Q99743 824 aa13.4□□□□□ -0.26
IRF3-224ENST00000599680 IPPKQ9H8X2 491 aa13.4□□□□□ -0.26
IRF3-224ENST00000599680 LYRM4Q9HD34 91 aa13.4□□□□□ -0.26
IRF3-224ENST00000599680 ADAP2Q9NPF8 381 aa13.4□□□□□ -0.26
IRF3-224ENST00000599680 PRDM7Q9NQW5 492 aa13.4□□□□□ -0.26
IRF3-224ENST00000599680 LRFN1Q9P244 771 aa13.4□□□□□ -0.26
IRF3-224ENST00000599680 PLEKHB1Q9UF11 243 aaPredicted RBP13.4□□□□□ -0.26
IRF3-224ENST00000599680 ERRFI1Q9UJM3 462 aaPredicted RBP13.4□□□□□ -0.26
IRF3-224ENST00000599680 FBXW2Q9UKT8 454 aa13.4□□□□□ -0.26
IRF3-224ENST00000599680 PCDHGB6Q9Y5F9 930 aa13.4□□□□□ -0.26
IRF3-224ENST00000599680 CLCA3PQ9Y6N3 262 aa13.4□□□□□ -0.26
IRF3-224ENST00000599680 LRRC14BA6NHZ5 514 aa13.39□□□□□ -0.27
IRF3-224ENST00000599680 TRIM49D1C9J1S8 452 aa13.39□□□□□ -0.27
IRF3-224ENST00000599680 RTCAO00442 366 aaKnown RBP13.39□□□□□ -0.27
IRF3-224ENST00000599680 CDK2AP1O14519 115 aa13.39□□□□□ -0.27
IRF3-224ENST00000599680 MAN1A2O60476 641 aa13.39□□□□□ -0.27
IRF3-224ENST00000599680 UGDHO60701 494 aa13.39□□□□□ -0.27
IRF3-224ENST00000599680 CTNSO60931 367 aa13.39□□□□□ -0.27
IRF3-224ENST00000599680 COL6A2P12110 1019 aa13.39□□□□□ -0.27
IRF3-224ENST00000599680 TNNI3P19429 210 aa13.39□□□□□ -0.27
IRF3-224ENST00000599680 HIST1H1TP22492 207 aaPredicted RBP13.39□□□□□ -0.27
IRF3-224ENST00000599680 CPN2P22792 545 aa13.39□□□□□ -0.27
IRF3-224ENST00000599680 ATP5A1P25705 553 aaKnown RBP13.39□□□□□ -0.27
IRF3-224ENST00000599680 TPP2P29144 1249 aaPredicted RBP13.39□□□□□ -0.27
IRF3-224ENST00000599680 ECHS1P30084 290 aa13.39□□□□□ -0.27
IRF3-224ENST00000599680 PIK3CBP42338 1070 aa13.39□□□□□ -0.27
IRF3-224ENST00000599680 CYB561P49447 251 aa13.39□□□□□ -0.27
IRF3-224ENST00000599680 PMP22Q01453 160 aa13.39□□□□□ -0.27
IRF3-224ENST00000599680 PCDH1Q08174 1060 aa13.39□□□□□ -0.27
IRF3-224ENST00000599680 PCBP2Q15366 365 aaKnown RBP eCLIP13.39□□□□□ -0.27
IRF3-224ENST00000599680 ELAVL1Q15717 326 aaKnown RBP13.39□□□□□ -0.27
IRF3-224ENST00000599680 C4orf17Q53FE4 359 aa13.39□□□□□ -0.27
IRF3-224ENST00000599680 SPINK14Q6IE38 97 aa13.39□□□□□ -0.27
IRF3-224ENST00000599680 OR4C11Q6IEV9 310 aa13.39□□□□□ -0.27
IRF3-224ENST00000599680 METTL2BQ6P1Q9 378 aaKnown RBP13.39□□□□□ -0.27
IRF3-224ENST00000599680 GOLGA7Q7Z5G4 137 aa13.39□□□□□ -0.27
IRF3-224ENST00000599680 TMEM132CQ8N3T6 1108 aa13.39□□□□□ -0.27
IRF3-224ENST00000599680 PTGR2Q8N8N7 351 aaPredicted RBP13.39□□□□□ -0.27
IRF3-224ENST00000599680 MDS2Q8NDY4 140 aa13.39□□□□□ -0.27
IRF3-224ENST00000599680 TMEM52Q8NDY8 209 aa13.39□□□□□ -0.27
IRF3-224ENST00000599680 NFAM1Q8NET5 270 aaPredicted RBP13.39□□□□□ -0.27
IRF3-224ENST00000599680 HUS1BQ8NHY5 278 aa13.39□□□□□ -0.27
IRF3-224ENST00000599680 THAP3Q8WTV1 239 aaPredicted RBP13.39□□□□□ -0.27
IRF3-224ENST00000599680 CSF3RQ99062 836 aa13.39□□□□□ -0.27
IRF3-224ENST00000599680 MTERF1Q99551 399 aaKnown RBP13.39□□□□□ -0.27
IRF3-224ENST00000599680 MAPKAP1Q9BPZ7 522 aa13.39□□□□□ -0.27
IRF3-224ENST00000599680 OR51B5Q9H339 312 aa13.39□□□□□ -0.27
IRF3-224ENST00000599680 ZNF358Q9NW07 568 aa13.39□□□□□ -0.27
IRF3-224ENST00000599680 SEC14L3Q9UDX4 400 aa13.39□□□□□ -0.27
IRF3-224ENST00000599680 ZNF180Q9UJW8 692 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms