RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 TFEBP19484 476 aa17.51■□□□□ 0.39
PNKP-213ENST00000599543 ZNF10P21506 573 aaPredicted RBP17.51■□□□□ 0.39
PNKP-213ENST00000599543 NME2P22392 152 aa17.51■□□□□ 0.39
PNKP-213ENST00000599543 CRABP2P29373 138 aa17.51■□□□□ 0.39
PNKP-213ENST00000599543 TYK2P29597 1187 aa17.51■□□□□ 0.39
PNKP-213ENST00000599543 HPDP32754 393 aaPredicted RBP17.51■□□□□ 0.39
PNKP-213ENST00000599543 KCNC1P48547 511 aa17.51■□□□□ 0.39
PNKP-213ENST00000599543 SERPINB8P50452 374 aa17.51■□□□□ 0.39
PNKP-213ENST00000599543 MLF1P58340 268 aa17.51■□□□□ 0.39
PNKP-213ENST00000599543 TGFBIQ15582 683 aa17.51■□□□□ 0.39
PNKP-213ENST00000599543 C3AR1Q16581 482 aa17.51■□□□□ 0.39
PNKP-213ENST00000599543 ZNF468Q5VIY5 522 aaPredicted RBP17.51■□□□□ 0.39
PNKP-213ENST00000599543 BNC2Q6ZN30 1099 aaPredicted RBP17.51■□□□□ 0.39
PNKP-213ENST00000599543 TBC1D1Q86TI0 1168 aaPredicted RBP17.51■□□□□ 0.39
PNKP-213ENST00000599543 KLHDC8AQ8IYD2 350 aa17.51■□□□□ 0.39
PNKP-213ENST00000599543 CENPLQ8N0S6 344 aaPredicted RBP17.51■□□□□ 0.39
PNKP-213ENST00000599543 TCAIMQ8N3R3 496 aa17.51■□□□□ 0.39
PNKP-213ENST00000599543 SEC16BQ96JE7 1060 aa17.51■□□□□ 0.39
PNKP-213ENST00000599543 UBXN10Q96LJ8 280 aa17.51■□□□□ 0.39
PNKP-213ENST00000599543 CAPS2Q9BXY5 557 aa17.51■□□□□ 0.39
PNKP-213ENST00000599543 PARD6BQ9BYG5 372 aa17.51■□□□□ 0.39
PNKP-213ENST00000599543 AICDAQ9GZX7 198 aa17.51■□□□□ 0.39
PNKP-213ENST00000599543 CNOT10Q9H9A5 744 aaKnown RBP17.51■□□□□ 0.39
PNKP-213ENST00000599543 WWOXQ9NZC7 414 aa17.51■□□□□ 0.39
PNKP-213ENST00000599543 GPRC5BQ9NZH0 403 aa17.51■□□□□ 0.39
PNKP-213ENST00000599543 ACOT9Q9Y305 439 aa17.51■□□□□ 0.39
PNKP-213ENST00000599543 CSMD2Q7Z408 3487 aa17.51■□□□□ 0.39
PNKP-213ENST00000599543 A0A0G2JN53 185 aa17.5■□□□□ 0.39
PNKP-213ENST00000599543 TRBV11-1A0A0K0K1C0 115 aa17.5■□□□□ 0.39
PNKP-213ENST00000599543 MYO1DO94832 1006 aa17.5■□□□□ 0.39
PNKP-213ENST00000599543 HNRNPH1P31943 449 aaKnown RBP17.5■□□□□ 0.39
PNKP-213ENST00000599543 SLCO1A2P46721 670 aa17.5■□□□□ 0.39
PNKP-213ENST00000599543 SERPINB9P50453 376 aa17.5■□□□□ 0.39
PNKP-213ENST00000599543 CLCN2P51788 898 aa17.5■□□□□ 0.39
PNKP-213ENST00000599543 TERF2Q15554 542 aa17.5■□□□□ 0.39
PNKP-213ENST00000599543 GPSM1Q86YR5 675 aa17.5■□□□□ 0.39
PNKP-213ENST00000599543 SPPL2CQ8IUH8 684 aa17.5■□□□□ 0.39
PNKP-213ENST00000599543 SIAH3Q8IW03 269 aa17.5■□□□□ 0.39
PNKP-213ENST00000599543 SRRM1Q8IYB3 904 aaKnown RBP17.5■□□□□ 0.39
PNKP-213ENST00000599543 PLD6Q8N2A8 252 aaKnown RBP17.5■□□□□ 0.39
PNKP-213ENST00000599543 NFAM1Q8NET5 270 aaPredicted RBP17.5■□□□□ 0.39
PNKP-213ENST00000599543 B3GNT7Q8NFL0 401 aa17.5■□□□□ 0.39
PNKP-213ENST00000599543 OR2W6PQ8NHA6 318 aa17.5■□□□□ 0.39
PNKP-213ENST00000599543 ADAMTS18Q8TE60 1221 aa17.5■□□□□ 0.39
PNKP-213ENST00000599543 ESAMQ96AP7 390 aa17.5■□□□□ 0.39
PNKP-213ENST00000599543 MS4A6EQ96DS6 147 aa17.5■□□□□ 0.39
PNKP-213ENST00000599543 NPLQ9BXD5 320 aaPredicted RBP17.5■□□□□ 0.39
PNKP-213ENST00000599543 PITHD1Q9GZP4 211 aaPredicted RBP17.5■□□□□ 0.39
PNKP-213ENST00000599543 TRIM45Q9H8W5 580 aaPredicted RBP17.5■□□□□ 0.39
PNKP-213ENST00000599543 CHST11Q9NPF2 352 aa17.5■□□□□ 0.39
PNKP-213ENST00000599543 TBK1Q9UHD2 729 aa17.5■□□□□ 0.39
PNKP-213ENST00000599543 RNF112Q9ULX5 631 aa17.5■□□□□ 0.39
PNKP-213ENST00000599543 MRPS33Q9Y291 106 aaKnown RBP17.5■□□□□ 0.39
PNKP-213ENST00000599543 LRIT2A6NDA9 550 aa17.49■□□□□ 0.39
PNKP-213ENST00000599543 ANKDD1BA6NHY2 528 aa17.49■□□□□ 0.39
PNKP-213ENST00000599543 CLDN4O14493 209 aa17.49■□□□□ 0.39
PNKP-213ENST00000599543 CLGNO14967 610 aa17.49■□□□□ 0.39
PNKP-213ENST00000599543 ASNA1O43681 348 aa17.49■□□□□ 0.39
PNKP-213ENST00000599543 B3GALT2O43825 422 aa17.49■□□□□ 0.39
PNKP-213ENST00000599543 LTA4HP09960 611 aaKnown RBP17.49■□□□□ 0.39
PNKP-213ENST00000599543 PRF1P14222 555 aa17.49■□□□□ 0.39
PNKP-213ENST00000599543 ABOP16442 354 aa17.49■□□□□ 0.39
PNKP-213ENST00000599543 HTR1EP28566 365 aa17.49■□□□□ 0.39
PNKP-213ENST00000599543 GRNP28799 593 aaKnown RBP17.49■□□□□ 0.39
PNKP-213ENST00000599543 TRHRP34981 398 aaPredicted RBP17.49■□□□□ 0.39
PNKP-213ENST00000599543 HSD17B3P37058 310 aa17.49■□□□□ 0.39
PNKP-213ENST00000599543 HLCSP50747 726 aa17.49■□□□□ 0.39
PNKP-213ENST00000599543 ATP6V0D1P61421 351 aa17.49■□□□□ 0.39
PNKP-213ENST00000599543 SLC13A2Q13183 592 aa17.49■□□□□ 0.39
PNKP-213ENST00000599543 TRIM40Q6P9F5 258 aa17.49■□□□□ 0.39
PNKP-213ENST00000599543 XKRXQ6PP77 449 aa17.49■□□□□ 0.39
PNKP-213ENST00000599543 TAOK1Q7L7X3 1001 aa17.49■□□□□ 0.39
PNKP-213ENST00000599543 MCEMP1Q8IX19 187 aa17.49■□□□□ 0.39
PNKP-213ENST00000599543 GHDCQ8N2G8 530 aa17.49■□□□□ 0.39
PNKP-213ENST00000599543 CPSF7Q8N684 471 aaKnown RBP17.49■□□□□ 0.39
PNKP-213ENST00000599543 AENQ8WTP8 325 aaKnown RBP17.49■□□□□ 0.39
PNKP-213ENST00000599543 ZBTB9Q96C00 473 aa17.49■□□□□ 0.39
PNKP-213ENST00000599543 TMEM79Q9BSE2 394 aa17.49■□□□□ 0.39
PNKP-213ENST00000599543 REXO4Q9GZR2 422 aaKnown RBP17.49■□□□□ 0.39
PNKP-213ENST00000599543 PNO1Q9NRX1 252 aaKnown RBP17.49■□□□□ 0.39
PNKP-213ENST00000599543 DNAJC11Q9NVH1 559 aa17.49■□□□□ 0.39
PNKP-213ENST00000599543 CD274Q9NZQ7 290 aa17.49■□□□□ 0.39
PNKP-213ENST00000599543 ZNF835Q9Y2P0 537 aa17.49■□□□□ 0.39
PNKP-213ENST00000599543 A0A087X1B8 175 aa17.48■□□□□ 0.39
PNKP-213ENST00000599543 SUPT3HB4E1H0 165 aa17.48■□□□□ 0.39
PNKP-213ENST00000599543 UBXN8O00124 270 aa17.48■□□□□ 0.39
PNKP-213ENST00000599543 SUPT3HO75486 399 aa17.48■□□□□ 0.39
PNKP-213ENST00000599543 CLEC3AO75596 197 aa17.48■□□□□ 0.39
PNKP-213ENST00000599543 KRT38O76015 456 aa17.48■□□□□ 0.39
PNKP-213ENST00000599543 SNRPAP09012 282 aaKnown RBP17.48■□□□□ 0.39
PNKP-213ENST00000599543 SMSP52788 366 aa17.48■□□□□ 0.39
PNKP-213ENST00000599543 PLA2G16P53816 162 aa17.48■□□□□ 0.39
PNKP-213ENST00000599543 HSD17B7P56937 341 aa17.48■□□□□ 0.39
PNKP-213ENST00000599543 RAB38P57729 211 aa17.48■□□□□ 0.39
PNKP-213ENST00000599543 RUNX2Q13950 521 aa17.48■□□□□ 0.39
PNKP-213ENST00000599543 SULT1C3Q6IMI6 304 aa17.48■□□□□ 0.39
PNKP-213ENST00000599543 WDR93Q6P2C0 686 aa17.48■□□□□ 0.39
PNKP-213ENST00000599543 Q6ZPB1 254 aaPredicted RBP17.48■□□□□ 0.39
PNKP-213ENST00000599543 ISCA2Q86U28 154 aa17.48■□□□□ 0.39
PNKP-213ENST00000599543 SCUBE1Q8IWY4 988 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms