RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 TMED5Q9Y3A6 229 aa11.44□□□□□ -0.58
SHKBP1-213ENST00000597325 SHANK1Q9Y566 2161 aa11.44□□□□□ -0.58
SHKBP1-213ENST00000597325 A0A088AWK7 358 aa11.43□□□□□ -0.58
SHKBP1-213ENST00000597325 ARHGAP10A1A4S6 786 aa11.43□□□□□ -0.58
SHKBP1-213ENST00000597325 LRIT2A6NDA9 550 aa11.43□□□□□ -0.58
SHKBP1-213ENST00000597325 C9orf172C9J069 976 aa11.43□□□□□ -0.58
SHKBP1-213ENST00000597325 NPIPB8E9PQR5 432 aa11.43□□□□□ -0.58
SHKBP1-213ENST00000597325 SAP18O00422 153 aaKnown RBP11.43□□□□□ -0.58
SHKBP1-213ENST00000597325 UBDO15205 165 aa11.43□□□□□ -0.58
SHKBP1-213ENST00000597325 P2RX6O15547 441 aa11.43□□□□□ -0.58
SHKBP1-213ENST00000597325 ERI3O43414 337 aaKnown RBP11.43□□□□□ -0.58
SHKBP1-213ENST00000597325 SNRNP200O75643 2136 aaKnown RBP11.43□□□□□ -0.58
SHKBP1-213ENST00000597325 DCTN3O75935 186 aa11.43□□□□□ -0.58
SHKBP1-213ENST00000597325 OR2B3O76000 313 aa11.43□□□□□ -0.58
SHKBP1-213ENST00000597325 MSL3P1P0C860 447 aa11.43□□□□□ -0.58
SHKBP1-213ENST00000597325 JMJD7P0C870 316 aa11.43□□□□□ -0.58
SHKBP1-213ENST00000597325 PRR35P0CG20 571 aa11.43□□□□□ -0.58
SHKBP1-213ENST00000597325 FOLR1P15328 257 aa11.43□□□□□ -0.58
SHKBP1-213ENST00000597325 ZNF10P21506 573 aaPredicted RBP11.43□□□□□ -0.58
SHKBP1-213ENST00000597325 HNRNPH1P31943 449 aaKnown RBP11.43□□□□□ -0.58
SHKBP1-213ENST00000597325 CCKBRP32239 447 aa11.43□□□□□ -0.58
SHKBP1-213ENST00000597325 ETV5P41161 510 aa11.43□□□□□ -0.58
SHKBP1-213ENST00000597325 SSR2P43308 183 aa11.43□□□□□ -0.58
SHKBP1-213ENST00000597325 ITGA1P56199 1179 aa11.43□□□□□ -0.58
SHKBP1-213ENST00000597325 STX1BP61266 288 aa11.43□□□□□ -0.58
SHKBP1-213ENST00000597325 SKP1P63208 163 aa11.43□□□□□ -0.58
SHKBP1-213ENST00000597325 ZFP36L1Q07352 338 aaKnown RBP11.43□□□□□ -0.58
SHKBP1-213ENST00000597325 GRM7Q14831 915 aa11.43□□□□□ -0.58
SHKBP1-213ENST00000597325 NDUFA9Q16795 377 aa11.43□□□□□ -0.58
SHKBP1-213ENST00000597325 LACTB2Q53H82 288 aaPredicted RBP11.43□□□□□ -0.58
SHKBP1-213ENST00000597325 DEPDC1Q5TB30 811 aa11.43□□□□□ -0.58
SHKBP1-213ENST00000597325 OGFOD2Q6N063 350 aa11.43□□□□□ -0.58
SHKBP1-213ENST00000597325 Q6ZSR9 355 aa11.43□□□□□ -0.58
SHKBP1-213ENST00000597325 LARP4Q71RC2 724 aaKnown RBP eCLIP11.43□□□□□ -0.58
SHKBP1-213ENST00000597325 NUDT13Q86X67 352 aa11.43□□□□□ -0.58
SHKBP1-213ENST00000597325 PARP9Q8IXQ6 854 aa11.43□□□□□ -0.58
SHKBP1-213ENST00000597325 C1orf52Q8N6N3 182 aaKnown RBP11.43□□□□□ -0.58
SHKBP1-213ENST00000597325 OR2L5Q8NG80 312 aa11.43□□□□□ -0.58
SHKBP1-213ENST00000597325 ZCCHC10Q8TBK6 192 aa11.43□□□□□ -0.58
SHKBP1-213ENST00000597325 TM4SF19Q96DZ7 209 aa11.43□□□□□ -0.58
SHKBP1-213ENST00000597325 CATSPER2Q96P56 530 aa11.43□□□□□ -0.58
SHKBP1-213ENST00000597325 QRFPRQ96P65 431 aa11.43□□□□□ -0.58
SHKBP1-213ENST00000597325 KCNC2Q96PR1 638 aa11.43□□□□□ -0.58
SHKBP1-213ENST00000597325 F2RL3Q96RI0 385 aa11.43□□□□□ -0.58
SHKBP1-213ENST00000597325 MACROD1Q9BQ69 325 aa11.43□□□□□ -0.58
SHKBP1-213ENST00000597325 C1orf50Q9BV19 199 aa11.43□□□□□ -0.58
SHKBP1-213ENST00000597325 MRPL1Q9BYD6 325 aaKnown RBP11.43□□□□□ -0.58
SHKBP1-213ENST00000597325 SLC6A16Q9GZN6 736 aa11.43□□□□□ -0.58
SHKBP1-213ENST00000597325 ROGDIQ9GZN7 287 aa11.43□□□□□ -0.58
SHKBP1-213ENST00000597325 FGF21Q9NSA1 209 aa11.43□□□□□ -0.58
SHKBP1-213ENST00000597325 MRGBPQ9NV56 204 aa11.43□□□□□ -0.58
SHKBP1-213ENST00000597325 GIMAP2Q9UG22 337 aa11.43□□□□□ -0.58
SHKBP1-213ENST00000597325 SERTAD3Q9UJW9 196 aa11.43□□□□□ -0.58
SHKBP1-213ENST00000597325 EIF3LQ9Y262 564 aaKnown RBP11.43□□□□□ -0.58
SHKBP1-213ENST00000597325 CCL27Q9Y4X3 112 aa11.43□□□□□ -0.58
SHKBP1-213ENST00000597325 POLR3HQ9Y535 204 aaPredicted RBP11.43□□□□□ -0.58
SHKBP1-213ENST00000597325 GNG14A0A1W2PPG7 69 aa11.42□□□□□ -0.58
SHKBP1-213ENST00000597325 EFCAB7A8K855 629 aa11.42□□□□□ -0.58
SHKBP1-213ENST00000597325 AGRPO00253 132 aa11.42□□□□□ -0.58
SHKBP1-213ENST00000597325 PCDH7O60245 1069 aa11.42□□□□□ -0.58
SHKBP1-213ENST00000597325 CCDC22O60826 627 aa11.42□□□□□ -0.58
SHKBP1-213ENST00000597325 ETHE1O95571 254 aa11.42□□□□□ -0.58
SHKBP1-213ENST00000597325 ZNF888P0CJ79 500 aaPredicted RBP11.42□□□□□ -0.58
SHKBP1-213ENST00000597325 NCF2P19878 526 aaPredicted RBP11.42□□□□□ -0.58
SHKBP1-213ENST00000597325 CD82P27701 267 aa11.42□□□□□ -0.58
SHKBP1-213ENST00000597325 GABRA4P48169 554 aa11.42□□□□□ -0.58
SHKBP1-213ENST00000597325 ARFIP1P53367 373 aa11.42□□□□□ -0.58
SHKBP1-213ENST00000597325 PLA2G16P53816 162 aa11.42□□□□□ -0.58
SHKBP1-213ENST00000597325 IRX1P78414 480 aaPredicted RBP11.42□□□□□ -0.58
SHKBP1-213ENST00000597325 EMX2Q04743 252 aa11.42□□□□□ -0.58
SHKBP1-213ENST00000597325 GABPB1Q06547 395 aaPredicted RBP11.42□□□□□ -0.58
SHKBP1-213ENST00000597325 FOXM1Q08050 763 aa11.42□□□□□ -0.58
SHKBP1-213ENST00000597325 RPS6KA2Q15349 733 aa11.42□□□□□ -0.58
SHKBP1-213ENST00000597325 HKDC1Q2TB90 917 aa11.42□□□□□ -0.58
SHKBP1-213ENST00000597325 ADPRMQ3LIE5 342 aa11.42□□□□□ -0.58
SHKBP1-213ENST00000597325 C6orf136Q5SQH8 315 aa11.42□□□□□ -0.58
SHKBP1-213ENST00000597325 WASHC2DQ5SRD0 308 aa11.42□□□□□ -0.58
SHKBP1-213ENST00000597325 METTL21CQ5VZV1 264 aa11.42□□□□□ -0.58
SHKBP1-213ENST00000597325 TLDC1Q6P9B6 456 aa11.42□□□□□ -0.58
SHKBP1-213ENST00000597325 COMMD6Q7Z4G1 85 aa11.42□□□□□ -0.58
SHKBP1-213ENST00000597325 METTL4Q8N3J2 472 aa11.42□□□□□ -0.58
SHKBP1-213ENST00000597325 KCT2Q8NC54 265 aa11.42□□□□□ -0.58
SHKBP1-213ENST00000597325 OR8K5Q8NH50 307 aa11.42□□□□□ -0.58
SHKBP1-213ENST00000597325 MS4A6EQ96DS6 147 aa11.42□□□□□ -0.58
SHKBP1-213ENST00000597325 APIPQ96GX9 242 aa11.42□□□□□ -0.58
SHKBP1-213ENST00000597325 OR6C1Q96RD1 312 aa11.42□□□□□ -0.58
SHKBP1-213ENST00000597325 CMKLR1Q99788 373 aa11.42□□□□□ -0.58
SHKBP1-213ENST00000597325 C17orf62Q9BQA9 187 aa11.42□□□□□ -0.58
SHKBP1-213ENST00000597325 TBCDQ9BTW9 1192 aa11.42□□□□□ -0.58
SHKBP1-213ENST00000597325 SYNPO2LQ9H987 977 aa11.42□□□□□ -0.58
SHKBP1-213ENST00000597325 HEY2Q9UBP5 337 aa11.42□□□□□ -0.58
SHKBP1-213ENST00000597325 RARRES3Q9UL19 164 aa11.42□□□□□ -0.58
SHKBP1-213ENST00000597325 G3BP2Q9UN86 482 aaKnown RBP11.42□□□□□ -0.58
SHKBP1-213ENST00000597325 RUVBL1Q9Y265 456 aaKnown RBP11.42□□□□□ -0.58
SHKBP1-213ENST00000597325 LOXL2Q9Y4K0 774 aa11.42□□□□□ -0.58
SHKBP1-213ENST00000597325 CCDC168Q8NDH2 2452 aa11.41□□□□□ -0.58
SHKBP1-213ENST00000597325 HEATR5BQ9P2D3 2071 aa11.41□□□□□ -0.58
SHKBP1-213ENST00000597325 HYKKA2RU49 373 aa11.41□□□□□ -0.58
SHKBP1-213ENST00000597325 PLPP1O14494 284 aa11.41□□□□□ -0.58
SHKBP1-213ENST00000597325 HCRTR1O43613 425 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms