RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 SCMH1Q96GD3 660 aa9.84□□□□□ -0.83
CCDC9-203ENST00000596938 PAFAH2Q99487 392 aa9.84□□□□□ -0.83
CCDC9-203ENST00000596938 VPS11Q9H270 941 aa9.84□□□□□ -0.83
CCDC9-203ENST00000596938 COPS7BQ9H9Q2 264 aaPredicted RBP9.84□□□□□ -0.83
CCDC9-203ENST00000596938 ERRFI1Q9UJM3 462 aaPredicted RBP9.84□□□□□ -0.83
CCDC9-203ENST00000596938 TMCO1Q9UM00 188 aa9.84□□□□□ -0.83
CCDC9-203ENST00000596938 ANGPTL3Q9Y5C1 460 aa9.84□□□□□ -0.83
CCDC9-203ENST00000596938 SHANK1Q9Y566 2161 aa9.83□□□□□ -0.84
CCDC9-203ENST00000596938 A0A087WUV0 522 aaPredicted RBP9.83□□□□□ -0.84
CCDC9-203ENST00000596938 GABRR3A8MPY1 467 aa9.83□□□□□ -0.84
CCDC9-203ENST00000596938 A8MUA0 341 aa9.83□□□□□ -0.84
CCDC9-203ENST00000596938 H0YIV9 168 aa9.83□□□□□ -0.84
CCDC9-203ENST00000596938 NEURL1O76050 574 aa9.83□□□□□ -0.84
CCDC9-203ENST00000596938 MYO1DO94832 1006 aa9.83□□□□□ -0.84
CCDC9-203ENST00000596938 LDLRP01130 860 aa9.83□□□□□ -0.84
CCDC9-203ENST00000596938 TGFB1P01137 390 aa9.83□□□□□ -0.84
CCDC9-203ENST00000596938 STSP08842 583 aa9.83□□□□□ -0.84
CCDC9-203ENST00000596938 PCNAP12004 261 aa9.83□□□□□ -0.84
CCDC9-203ENST00000596938 CD46P15529 392 aa9.83□□□□□ -0.84
CCDC9-203ENST00000596938 HIST1H1TP22492 207 aaPredicted RBP9.83□□□□□ -0.84
CCDC9-203ENST00000596938 PTX3P26022 381 aaPredicted RBP9.83□□□□□ -0.84
CCDC9-203ENST00000596938 CERS1P27544 350 aa9.83□□□□□ -0.84
CCDC9-203ENST00000596938 TRHRP34981 398 aaPredicted RBP9.83□□□□□ -0.84
CCDC9-203ENST00000596938 PIK3CGP48736 1102 aa9.83□□□□□ -0.84
CCDC9-203ENST00000596938 CLCN2P51788 898 aa9.83□□□□□ -0.84
CCDC9-203ENST00000596938 GPR143P51810 404 aa9.83□□□□□ -0.84
CCDC9-203ENST00000596938 TDGF1P3P51864 188 aa9.83□□□□□ -0.84
CCDC9-203ENST00000596938 HNRNPFP52597 415 aaKnown RBP9.83□□□□□ -0.84
CCDC9-203ENST00000596938 MLF1P58340 268 aa9.83□□□□□ -0.84
CCDC9-203ENST00000596938 SLC13A2Q13183 592 aa9.83□□□□□ -0.84
CCDC9-203ENST00000596938 GTF2H2Q13888 395 aa9.83□□□□□ -0.84
CCDC9-203ENST00000596938 OR1C1Q15619 314 aa9.83□□□□□ -0.84
CCDC9-203ENST00000596938 TSNAXIP1Q2TAA8 658 aa9.83□□□□□ -0.84
CCDC9-203ENST00000596938 AP5B1Q2VPB7 878 aa9.83□□□□□ -0.84
CCDC9-203ENST00000596938 C4orf17Q53FE4 359 aa9.83□□□□□ -0.84
CCDC9-203ENST00000596938 TECRLQ5HYJ1 363 aa9.83□□□□□ -0.84
CCDC9-203ENST00000596938 LGSNQ5TDP6 509 aa9.83□□□□□ -0.84
CCDC9-203ENST00000596938 SPINK14Q6IE38 97 aa9.83□□□□□ -0.84
CCDC9-203ENST00000596938 OR4C11Q6IEV9 310 aa9.83□□□□□ -0.84
CCDC9-203ENST00000596938 SLC25A25Q6KCM7 469 aa9.83□□□□□ -0.84
CCDC9-203ENST00000596938 GTF2H2CQ6P1K8 395 aa9.83□□□□□ -0.84
CCDC9-203ENST00000596938 ZNF793Q6ZN11 406 aa9.83□□□□□ -0.84
CCDC9-203ENST00000596938 TRMT10CQ7L0Y3 403 aaKnown RBP9.83□□□□□ -0.84
CCDC9-203ENST00000596938 PLD6Q8N2A8 252 aaKnown RBP9.83□□□□□ -0.84
CCDC9-203ENST00000596938 TMEM132CQ8N3T6 1108 aa9.83□□□□□ -0.84
CCDC9-203ENST00000596938 KIF2BQ8N4N8 673 aa9.83□□□□□ -0.84
CCDC9-203ENST00000596938 L3MBTL4Q8NA19 623 aa9.83□□□□□ -0.84
CCDC9-203ENST00000596938 FAM47BQ8NA70 645 aa9.83□□□□□ -0.84
CCDC9-203ENST00000596938 TMEM52Q8NDY8 209 aa9.83□□□□□ -0.84
CCDC9-203ENST00000596938 HUS1BQ8NHY5 278 aa9.83□□□□□ -0.84
CCDC9-203ENST00000596938 DCAKDQ8WVC6 231 aa9.83□□□□□ -0.84
CCDC9-203ENST00000596938 RGMAQ96B86 450 aa9.83□□□□□ -0.84
CCDC9-203ENST00000596938 REPS1Q96D71 796 aa9.83□□□□□ -0.84
CCDC9-203ENST00000596938 C5orf34Q96MH7 638 aa9.83□□□□□ -0.84
CCDC9-203ENST00000596938 SIGLEC12Q96PQ1 595 aa9.83□□□□□ -0.84
CCDC9-203ENST00000596938 DEFB126Q9BYW3 111 aa9.83□□□□□ -0.84
CCDC9-203ENST00000596938 IPPKQ9H8X2 491 aa9.83□□□□□ -0.84
CCDC9-203ENST00000596938 ACTR8Q9H981 624 aa9.83□□□□□ -0.84
CCDC9-203ENST00000596938 MS4A12Q9NXJ0 267 aa9.83□□□□□ -0.84
CCDC9-203ENST00000596938 LRFN1Q9P244 771 aa9.83□□□□□ -0.84
CCDC9-203ENST00000596938 VTI1BQ9UEU0 232 aa9.83□□□□□ -0.84
CCDC9-203ENST00000596938 NFU1Q9UMS0 254 aa9.83□□□□□ -0.84
CCDC9-203ENST00000596938 OSGIN2Q9Y236 505 aa9.83□□□□□ -0.84
CCDC9-203ENST00000596938 NUP210LQ5VU65 1888 aa9.83□□□□□ -0.84
CCDC9-203ENST00000596938 DOCK10Q96BY6 2186 aa9.82□□□□□ -0.84
CCDC9-203ENST00000596938 ASPDHA6ND91 283 aa9.82□□□□□ -0.84
CCDC9-203ENST00000596938 LRRC14BA6NHZ5 514 aa9.82□□□□□ -0.84
CCDC9-203ENST00000596938 POC1B-GALNT4F8VUJ3 575 aa9.82□□□□□ -0.84
CCDC9-203ENST00000596938 STX16-NPEPL1H3BU86 382 aa9.82□□□□□ -0.84
CCDC9-203ENST00000596938 TGFBR3LH3BV60 316 aa9.82□□□□□ -0.84
CCDC9-203ENST00000596938 FOXE1O00358 373 aaPredicted RBP9.82□□□□□ -0.84
CCDC9-203ENST00000596938 STX16O14662 325 aa9.82□□□□□ -0.84
CCDC9-203ENST00000596938 SIX3O95343 332 aaPredicted RBP9.82□□□□□ -0.84
CCDC9-203ENST00000596938 SP1P08047 785 aa9.82□□□□□ -0.84
CCDC9-203ENST00000596938 ABHD2P08910 425 aa9.82□□□□□ -0.84
CCDC9-203ENST00000596938 SNRPAP09012 282 aaKnown RBP9.82□□□□□ -0.84
CCDC9-203ENST00000596938 RNF224P0DH78 156 aa9.82□□□□□ -0.84
CCDC9-203ENST00000596938 TPP2P29144 1249 aaPredicted RBP9.82□□□□□ -0.84
CCDC9-203ENST00000596938 CYB561P49447 251 aa9.82□□□□□ -0.84
CCDC9-203ENST00000596938 HLCSP50747 726 aa9.82□□□□□ -0.84
CCDC9-203ENST00000596938 OC90Q02509 493 aaPredicted RBP9.82□□□□□ -0.84
CCDC9-203ENST00000596938 BIKQ13323 160 aa9.82□□□□□ -0.84
CCDC9-203ENST00000596938 CUL3Q13618 768 aa9.82□□□□□ -0.84
CCDC9-203ENST00000596938 SERTAD2Q14140 314 aa9.82□□□□□ -0.84
CCDC9-203ENST00000596938 ELAVL1Q15717 326 aaKnown RBP9.82□□□□□ -0.84
CCDC9-203ENST00000596938 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.82□□□□□ -0.846e-7■□□□□ 10.9
CCDC9-203ENST00000596938 TIFABQ6ZNK6 161 aa9.82□□□□□ -0.84
CCDC9-203ENST00000596938 GOLGA7Q7Z5G4 137 aa9.82□□□□□ -0.84
CCDC9-203ENST00000596938 CNPY4Q8N129 248 aa9.82□□□□□ -0.84
CCDC9-203ENST00000596938 TMEM178AQ8NBL3 297 aa9.82□□□□□ -0.84
CCDC9-203ENST00000596938 MORN4Q8NDC4 146 aa9.82□□□□□ -0.84
CCDC9-203ENST00000596938 TRIM44Q96DX7 344 aaPredicted RBP9.82□□□□□ -0.84
CCDC9-203ENST00000596938 VMP1Q96GC9 406 aa9.82□□□□□ -0.84
CCDC9-203ENST00000596938 MAPKAP1Q9BPZ7 522 aa9.82□□□□□ -0.84
CCDC9-203ENST00000596938 MRPL57Q9BQC6 102 aaKnown RBP9.82□□□□□ -0.84
CCDC9-203ENST00000596938 CENPKQ9BS16 269 aa9.82□□□□□ -0.84
CCDC9-203ENST00000596938 NTMT1Q9BV86 223 aa9.82□□□□□ -0.84
CCDC9-203ENST00000596938 ALOXE3Q9BYJ1 711 aa9.82□□□□□ -0.84
CCDC9-203ENST00000596938 OR51B5Q9H339 312 aa9.82□□□□□ -0.84
CCDC9-203ENST00000596938 ADAP2Q9NPF8 381 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms