RNA–Protein interactions for RNA: ENST00000596348.2

SCN1B-204, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 1,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-204ENST00000596348 RGMAQ96B86 450 aa14.09□□□□□ -0.15
SCN1B-204ENST00000596348 SMC6Q96SB8 1091 aa14.09□□□□□ -0.15
SCN1B-204ENST00000596348 HBEGFQ99075 208 aa14.09□□□□□ -0.15
SCN1B-204ENST00000596348 MAPKAP1Q9BPZ7 522 aa14.09□□□□□ -0.15
SCN1B-204ENST00000596348 WDR77Q9BQA1 342 aaPredicted RBP14.09□□□□□ -0.15
SCN1B-204ENST00000596348 IQCGQ9H095 443 aaKnown RBP14.09□□□□□ -0.15
SCN1B-204ENST00000596348 PSD3Q9NYI0 1048 aa14.09□□□□□ -0.15
SCN1B-204ENST00000596348 CLDN16Q9Y5I7 305 aa14.09□□□□□ -0.15
SCN1B-204ENST00000596348 NSG1A0A0A6YYJ2 146 aa14.08□□□□□ -0.16
SCN1B-204ENST00000596348 MANBAO00462 879 aa14.08□□□□□ -0.16
SCN1B-204ENST00000596348 PRMT3O60678 531 aa14.08□□□□□ -0.16
SCN1B-204ENST00000596348 SEC24DO94855 1032 aaPredicted RBP14.08□□□□□ -0.16
SCN1B-204ENST00000596348 ESRRBO95718 433 aa14.08□□□□□ -0.16
SCN1B-204ENST00000596348 PDYNP01213 254 aa14.08□□□□□ -0.16
SCN1B-204ENST00000596348 ITGA3P26006 1051 aa14.08□□□□□ -0.16
SCN1B-204ENST00000596348 HTR6P50406 440 aa14.08□□□□□ -0.16
SCN1B-204ENST00000596348 RAP1GDS1P52306 607 aa14.08□□□□□ -0.16
SCN1B-204ENST00000596348 PKNOX1P55347 436 aa14.08□□□□□ -0.16
SCN1B-204ENST00000596348 NFATC3Q12968 1075 aa14.08□□□□□ -0.16
SCN1B-204ENST00000596348 IFT88Q13099 833 aa14.08□□□□□ -0.16
SCN1B-204ENST00000596348 MYBPC3Q14896 1274 aa14.08□□□□□ -0.16
SCN1B-204ENST00000596348 C10orf62Q5T681 223 aaPredicted RBP14.08□□□□□ -0.16
SCN1B-204ENST00000596348 LIPMQ5VYY2 423 aa14.08□□□□□ -0.16
SCN1B-204ENST00000596348 LRIG3Q6UXM1 1119 aa14.08□□□□□ -0.16
SCN1B-204ENST00000596348 CPEB2Q7Z5Q1 589 aaKnown RBP14.08□□□□□ -0.16
SCN1B-204ENST00000596348 EXOC3L1Q86VI1 746 aa14.08□□□□□ -0.16
SCN1B-204ENST00000596348 SCUBE1Q8IWY4 988 aa14.08□□□□□ -0.16
SCN1B-204ENST00000596348 MYRIPQ8NFW9 859 aa14.08□□□□□ -0.16
SCN1B-204ENST00000596348 VPS50Q96JG6 964 aa14.08□□□□□ -0.16
SCN1B-204ENST00000596348 IMMP1LQ96LU5 166 aa14.08□□□□□ -0.16
SCN1B-204ENST00000596348 MAGEB10Q96LZ2 347 aaPredicted RBP14.08□□□□□ -0.16
SCN1B-204ENST00000596348 PTCHD1Q96NR3 888 aa14.08□□□□□ -0.16
SCN1B-204ENST00000596348 KCNA7Q96RP8 456 aa14.08□□□□□ -0.16
SCN1B-204ENST00000596348 MECRQ9BV79 373 aa14.08□□□□□ -0.16
SCN1B-204ENST00000596348 SLC29A3Q9BZD2 475 aa14.08□□□□□ -0.16
SCN1B-204ENST00000596348 ROGDIQ9GZN7 287 aa14.08□□□□□ -0.16
SCN1B-204ENST00000596348 ELOVL6Q9H5J4 265 aa14.08□□□□□ -0.16
SCN1B-204ENST00000596348 LYRM4Q9HD34 91 aa14.08□□□□□ -0.16
SCN1B-204ENST00000596348 TNFRSF12AQ9NP84 129 aa14.08□□□□□ -0.16
SCN1B-204ENST00000596348 NECTIN3Q9NQS3 549 aa14.08□□□□□ -0.16
SCN1B-204ENST00000596348 RIC8BQ9NVN3 520 aa14.08□□□□□ -0.16
SCN1B-204ENST00000596348 GPR83Q9NYM4 423 aa14.08□□□□□ -0.16
SCN1B-204ENST00000596348 SENP1Q9P0U3 644 aa14.08□□□□□ -0.16
SCN1B-204ENST00000596348 MID2Q9UJV3 735 aa14.08□□□□□ -0.16
SCN1B-204ENST00000596348 A0A0A6YYD5 115 aa14.07□□□□□ -0.16
SCN1B-204ENST00000596348 EIF4E1BA6NMX2 242 aaKnown RBP14.07□□□□□ -0.16
SCN1B-204ENST00000596348 CTIFO43310 598 aaKnown RBP14.07□□□□□ -0.16
SCN1B-204ENST00000596348 TMPRSS11DO60235 418 aa14.07□□□□□ -0.16
SCN1B-204ENST00000596348 SEMA3DO95025 777 aa14.07□□□□□ -0.16
SCN1B-204ENST00000596348 ALDH3A1P30838 453 aa14.07□□□□□ -0.16
SCN1B-204ENST00000596348 PGDP52209 483 aa14.07□□□□□ -0.16
SCN1B-204ENST00000596348 ARFIP1P53367 373 aa14.07□□□□□ -0.16
SCN1B-204ENST00000596348 FOXA1P55317 472 aa14.07□□□□□ -0.16
SCN1B-204ENST00000596348 SFT2D3Q587I9 215 aa14.07□□□□□ -0.16
SCN1B-204ENST00000596348 ASB18Q6ZVZ8 466 aa14.07□□□□□ -0.16
SCN1B-204ENST00000596348 ADAMTS18Q8TE60 1221 aa14.07□□□□□ -0.16
SCN1B-204ENST00000596348 SELENOMQ8WWX9 145 aa14.07□□□□□ -0.16
SCN1B-204ENST00000596348 SERPINI1Q99574 410 aa14.07□□□□□ -0.16
SCN1B-204ENST00000596348 SMAD5Q99717 465 aaKnown RBP14.07□□□□□ -0.16
SCN1B-204ENST00000596348 CENPKQ9BS16 269 aa14.07□□□□□ -0.16
SCN1B-204ENST00000596348 GATA5Q9BWX5 397 aaPredicted RBP14.07□□□□□ -0.16
SCN1B-204ENST00000596348 MRPL1Q9BYD6 325 aaKnown RBP14.07□□□□□ -0.16
SCN1B-204ENST00000596348 CENPHQ9H3R5 247 aa14.07□□□□□ -0.16
SCN1B-204ENST00000596348 ZNF552Q9H707 407 aaPredicted RBP14.07□□□□□ -0.16
SCN1B-204ENST00000596348 DDX31Q9H8H2 851 aaKnown RBP14.07□□□□□ -0.16
SCN1B-204ENST00000596348 MID1IP1Q9NPA3 183 aa14.07□□□□□ -0.16
SCN1B-204ENST00000596348 PRDM9Q9NQV7 894 aa14.07□□□□□ -0.16
SCN1B-204ENST00000596348 C19orf25Q9UFG5 118 aaPredicted RBP14.07□□□□□ -0.16
SCN1B-204ENST00000596348 SNX6Q9UNH7 406 aa14.07□□□□□ -0.16
SCN1B-204ENST00000596348 STK38LQ9Y2H1 464 aa14.07□□□□□ -0.16
SCN1B-204ENST00000596348 TIMM22Q9Y584 194 aa14.07□□□□□ -0.16
SCN1B-204ENST00000596348 SPENQ96T58 3664 aaKnown RBP14.06□□□□□ -0.16
SCN1B-204ENST00000596348 TCRBV16S1A1N1A0A5B0 115 aa14.06□□□□□ -0.16
SCN1B-204ENST00000596348 TRIM13O60858 407 aa14.06□□□□□ -0.16
SCN1B-204ENST00000596348 GBAP04062 536 aa14.06□□□□□ -0.16
SCN1B-204ENST00000596348 ENO1P06733 434 aaKnown RBP14.06□□□□□ -0.16
SCN1B-204ENST00000596348 PRR35P0CG20 571 aa14.06□□□□□ -0.16
SCN1B-204ENST00000596348 CHN1P15882 459 aa14.06□□□□□ -0.16
SCN1B-204ENST00000596348 ETV4P43268 484 aa14.06□□□□□ -0.16
SCN1B-204ENST00000596348 TSFMP43897 325 aaKnown RBP14.06□□□□□ -0.16
SCN1B-204ENST00000596348 HNRNPH2P55795 449 aaKnown RBP14.06□□□□□ -0.16
SCN1B-204ENST00000596348 SLAMF1Q13291 335 aa14.06□□□□□ -0.16
SCN1B-204ENST00000596348 CFAP157Q5JU67 520 aa14.06□□□□□ -0.16
SCN1B-204ENST00000596348 COLEC12Q5KU26 742 aa14.06□□□□□ -0.16
SCN1B-204ENST00000596348 VWA5B1Q5TIE3 1220 aa14.06□□□□□ -0.16
SCN1B-204ENST00000596348 MRM1Q6IN84 353 aaKnown RBP14.06□□□□□ -0.16
SCN1B-204ENST00000596348 PAPD4Q6PIY7 484 aaKnown RBP14.06□□□□□ -0.16
SCN1B-204ENST00000596348 PTRH1Q86Y79 214 aaKnown RBP14.06□□□□□ -0.16
SCN1B-204ENST00000596348 ZNF595Q8IYB9 648 aa14.06□□□□□ -0.16
SCN1B-204ENST00000596348 ZCCHC7Q8N3Z6 543 aaKnown RBP14.06□□□□□ -0.16
SCN1B-204ENST00000596348 METTL6Q8TCB7 284 aa14.06□□□□□ -0.16
SCN1B-204ENST00000596348 PSMF1Q92530 271 aa14.06□□□□□ -0.16
SCN1B-204ENST00000596348 PGM2Q96G03 612 aa14.06□□□□□ -0.16
SCN1B-204ENST00000596348 THOC3Q96J01 351 aaKnown RBP14.06□□□□□ -0.16
SCN1B-204ENST00000596348 TUBB6Q9BUF5 446 aa14.06□□□□□ -0.16
SCN1B-204ENST00000596348 SHCBP1LQ9BZQ2 653 aa14.06□□□□□ -0.16
SCN1B-204ENST00000596348 LHPPQ9H008 270 aa14.06□□□□□ -0.16
SCN1B-204ENST00000596348 BRF2Q9HAW0 419 aa14.06□□□□□ -0.16
SCN1B-204ENST00000596348 ZBTB20Q9HC78 741 aaPredicted RBP14.06□□□□□ -0.16
SCN1B-204ENST00000596348 PRTFDC1Q9NRG1 225 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms