RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 SYT10Q6XYQ8 523 aa12.75□□□□□ -0.37
SHKBP1-208ENST00000595726 CNTN4Q8IWV2 1026 aa12.75□□□□□ -0.37
SHKBP1-208ENST00000595726 APCDD1LQ8NCL9 501 aa12.75□□□□□ -0.37
SHKBP1-208ENST00000595726 NAXEQ8NCW5 288 aa12.75□□□□□ -0.37
SHKBP1-208ENST00000595726 SIMC1Q8NDZ2 872 aa12.75□□□□□ -0.37
SHKBP1-208ENST00000595726 SPATA4Q8NEY3 305 aa12.75□□□□□ -0.37
SHKBP1-208ENST00000595726 CD200R1Q8TD46 325 aa12.75□□□□□ -0.37
SHKBP1-208ENST00000595726 LRRC39Q96DD0 335 aa12.75□□□□□ -0.37
SHKBP1-208ENST00000595726 CERS2Q96G23 380 aa12.75□□□□□ -0.37
SHKBP1-208ENST00000595726 OR1F2PQ96R84 312 aa12.75□□□□□ -0.37
SHKBP1-208ENST00000595726 AARSD1Q9BTE6 412 aaKnown RBP12.75□□□□□ -0.37
SHKBP1-208ENST00000595726 NECTIN3Q9NQS3 549 aa12.75□□□□□ -0.37
SHKBP1-208ENST00000595726 KLHL42Q9P2K6 505 aa12.75□□□□□ -0.37
SHKBP1-208ENST00000595726 ZNF223Q9UK11 482 aaPredicted RBP12.75□□□□□ -0.37
SHKBP1-208ENST00000595726 CHMP2BQ9UQN3 213 aa12.75□□□□□ -0.37
SHKBP1-208ENST00000595726 SH2B3Q9UQQ2 575 aa12.75□□□□□ -0.37
SHKBP1-208ENST00000595726 COMMD10Q9Y6G5 202 aa12.75□□□□□ -0.37
SHKBP1-208ENST00000595726 TEX264Q9Y6I9 313 aa12.75□□□□□ -0.37
SHKBP1-208ENST00000595726 ARID1AO14497 2285 aa12.74□□□□□ -0.37
SHKBP1-208ENST00000595726 CLCA1A8K7I4 914 aa12.74□□□□□ -0.37
SHKBP1-208ENST00000595726 KDM4EB2RXH2 506 aaPredicted RBP12.74□□□□□ -0.37
SHKBP1-208ENST00000595726 ACOT7O00154 380 aa12.74□□□□□ -0.37
SHKBP1-208ENST00000595726 AQP7O14520 342 aa12.74□□□□□ -0.37
SHKBP1-208ENST00000595726 PRKNO60260 465 aaPredicted RBP12.74□□□□□ -0.37
SHKBP1-208ENST00000595726 WDR1O75083 606 aa12.74□□□□□ -0.37
SHKBP1-208ENST00000595726 PSIP1O75475 530 aaKnown RBP12.74□□□□□ -0.37
SHKBP1-208ENST00000595726 GLSO94925 669 aaPredicted RBP12.74□□□□□ -0.37
SHKBP1-208ENST00000595726 SYF2O95926 243 aaKnown RBP12.74□□□□□ -0.37
SHKBP1-208ENST00000595726 IL10P22301 178 aa12.74□□□□□ -0.37
SHKBP1-208ENST00000595726 PEX19P40855 299 aa12.74□□□□□ -0.37
SHKBP1-208ENST00000595726 RPL21P46778 160 aaKnown RBP12.74□□□□□ -0.37
SHKBP1-208ENST00000595726 ARL4CP56559 192 aa12.74□□□□□ -0.37
SHKBP1-208ENST00000595726 RPS15AP62244 130 aaKnown RBP12.74□□□□□ -0.37
SHKBP1-208ENST00000595726 MRPS25P82663 173 aaKnown RBP12.74□□□□□ -0.37
SHKBP1-208ENST00000595726 C2orf54Q08AI8 447 aa12.74□□□□□ -0.37
SHKBP1-208ENST00000595726 HP1BP3Q5SSJ5 553 aaPredicted RBP12.74□□□□□ -0.37
SHKBP1-208ENST00000595726 WLSQ5T9L3 541 aa12.74□□□□□ -0.37
SHKBP1-208ENST00000595726 STEAP4Q687X5 459 aa12.74□□□□□ -0.37
SHKBP1-208ENST00000595726 SLC22A16Q86VW1 577 aa12.74□□□□□ -0.37
SHKBP1-208ENST00000595726 LRRC56Q8IYG6 542 aaPredicted RBP12.74□□□□□ -0.37
SHKBP1-208ENST00000595726 CAMKVQ8NCB2 501 aa12.74□□□□□ -0.37
SHKBP1-208ENST00000595726 SLC13A3Q8WWT9 602 aa12.74□□□□□ -0.37
SHKBP1-208ENST00000595726 CFAP36Q96G28 342 aa12.74□□□□□ -0.37
SHKBP1-208ENST00000595726 GPR21Q99679 349 aa12.74□□□□□ -0.37
SHKBP1-208ENST00000595726 TMEM184CQ9NVA4 438 aa12.74□□□□□ -0.37
SHKBP1-208ENST00000595726 SLC17A6Q9P2U8 582 aa12.74□□□□□ -0.37
SHKBP1-208ENST00000595726 B4GALT7Q9UBV7 327 aa12.74□□□□□ -0.37
SHKBP1-208ENST00000595726 DHRS7Q9Y394 339 aa12.74□□□□□ -0.37
SHKBP1-208ENST00000595726 OR6B1O95007 311 aa12.73□□□□□ -0.37
SHKBP1-208ENST00000595726 HRGP04196 525 aa12.73□□□□□ -0.37
SHKBP1-208ENST00000595726 MPC1LP0DKB6 136 aa12.73□□□□□ -0.37
SHKBP1-208ENST00000595726 ENO3P13929 434 aaPredicted RBP12.73□□□□□ -0.37
SHKBP1-208ENST00000595726 ENDOUP21128 410 aaKnown RBP12.73□□□□□ -0.37
SHKBP1-208ENST00000595726 GABRB3P28472 473 aa12.73□□□□□ -0.37
SHKBP1-208ENST00000595726 MAN2A2P49641 1150 aa12.73□□□□□ -0.37
SHKBP1-208ENST00000595726 ASCL1P50553 236 aa12.73□□□□□ -0.37
SHKBP1-208ENST00000595726 SSR4P51571 173 aa12.73□□□□□ -0.37
SHKBP1-208ENST00000595726 TIAL1Q01085 375 aaKnown RBP eCLIP12.73□□□□□ -0.37
SHKBP1-208ENST00000595726 CBLBQ13191 982 aa12.73□□□□□ -0.37
SHKBP1-208ENST00000595726 FASTKD3Q14CZ7 662 aaKnown RBP12.73□□□□□ -0.37
SHKBP1-208ENST00000595726 ZNF750Q32MQ0 723 aa12.73□□□□□ -0.37
SHKBP1-208ENST00000595726 DEFB134Q4QY38 66 aa12.73□□□□□ -0.37
SHKBP1-208ENST00000595726 TRMT10BQ6PF06 316 aaKnown RBP12.73□□□□□ -0.37
SHKBP1-208ENST00000595726 POMZP3Q6PJE2 187 aa12.73□□□□□ -0.37
SHKBP1-208ENST00000595726 RGS9BPQ6ZS82 235 aa12.73□□□□□ -0.37
SHKBP1-208ENST00000595726 KIAA0408Q6ZU52 694 aa12.73□□□□□ -0.37
SHKBP1-208ENST00000595726 GALNT7Q86SF2 657 aa12.73□□□□□ -0.37
SHKBP1-208ENST00000595726 ASPGQ86U10 573 aa12.73□□□□□ -0.37
SHKBP1-208ENST00000595726 CPNE9Q8IYJ1 553 aa12.73□□□□□ -0.37
SHKBP1-208ENST00000595726 FBXO15Q8NCQ5 510 aaPredicted RBP12.73□□□□□ -0.37
SHKBP1-208ENST00000595726 TNIP2Q8NFZ5 429 aa12.73□□□□□ -0.37
SHKBP1-208ENST00000595726 GABPB2Q8TAK5 448 aaPredicted RBP12.73□□□□□ -0.37
SHKBP1-208ENST00000595726 NDNQ99608 321 aa12.73□□□□□ -0.37
SHKBP1-208ENST00000595726 LDAHQ9H6V9 325 aa12.73□□□□□ -0.37
SHKBP1-208ENST00000595726 FAM114A2Q9NRY5 505 aa12.73□□□□□ -0.37
SHKBP1-208ENST00000595726 SPRR3Q9UBC9 169 aa12.73□□□□□ -0.37
SHKBP1-208ENST00000595726 SNX24Q9Y343 169 aa12.73□□□□□ -0.37
SHKBP1-208ENST00000595726 TCRBV16S1A1N1A0A5B0 115 aa12.72□□□□□ -0.37
SHKBP1-208ENST00000595726 FAM187AA6NFU0 413 aa12.72□□□□□ -0.37
SHKBP1-208ENST00000595726 HSPB2A8KAH6 182 aa12.72□□□□□ -0.37
SHKBP1-208ENST00000595726 A8MVJ9 347 aa12.72□□□□□ -0.37
SHKBP1-208ENST00000595726 E7ESA3 106 aa12.72□□□□□ -0.37
SHKBP1-208ENST00000595726 RAD51CO43502 376 aa12.72□□□□□ -0.37
SHKBP1-208ENST00000595726 CRLF1O75462 422 aa12.72□□□□□ -0.37
SHKBP1-208ENST00000595726 OR2J2O76002 312 aa12.72□□□□□ -0.37
SHKBP1-208ENST00000595726 MYO1DO94832 1006 aa12.72□□□□□ -0.37
SHKBP1-208ENST00000595726 AHSGP02765 367 aa12.72□□□□□ -0.37
SHKBP1-208ENST00000595726 CATP04040 527 aaKnown RBP12.72□□□□□ -0.37
SHKBP1-208ENST00000595726 HSD17B2P37059 387 aa12.72□□□□□ -0.37
SHKBP1-208ENST00000595726 CLCN2P51788 898 aa12.72□□□□□ -0.37
SHKBP1-208ENST00000595726 AGFG1P52594 562 aaKnown RBP12.72□□□□□ -0.37
SHKBP1-208ENST00000595726 SLC10A1Q14973 349 aa12.72□□□□□ -0.37
SHKBP1-208ENST00000595726 HSPB2Q16082 182 aa12.72□□□□□ -0.37
SHKBP1-208ENST00000595726 FBXL19-AS1Q494R0 122 aa12.72□□□□□ -0.37
SHKBP1-208ENST00000595726 RBM20Q5T481 1227 aaKnown RBP12.72□□□□□ -0.37
SHKBP1-208ENST00000595726 TEDDM1Q5T9Z0 273 aa12.72□□□□□ -0.37
SHKBP1-208ENST00000595726 CAPN13Q6MZZ7 669 aaPredicted RBP12.72□□□□□ -0.37
SHKBP1-208ENST00000595726 ANKMY2Q8IV38 441 aa12.72□□□□□ -0.37
SHKBP1-208ENST00000595726 FAM109AQ8N4B1 249 aa12.72□□□□□ -0.37
SHKBP1-208ENST00000595726 ZNF740Q8NDX6 193 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms