RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 DEFB126Q9BYW3 111 aa16.27■□□□□ 0.2
IRF3-208ENST00000594387 NOL11Q9H8H0 719 aaKnown RBP16.27■□□□□ 0.2
IRF3-208ENST00000594387 NECTIN3Q9NQS3 549 aa16.27■□□□□ 0.2
IRF3-208ENST00000594387 ZNF358Q9NW07 568 aa16.27■□□□□ 0.2
IRF3-208ENST00000594387 MS4A12Q9NXJ0 267 aa16.27■□□□□ 0.2
IRF3-208ENST00000594387 TSC22D4Q9Y3Q8 395 aa16.27■□□□□ 0.2
IRF3-208ENST00000594387 RP1L1Q8IWN7 2480 aaPredicted RBP16.26■□□□□ 0.19
IRF3-208ENST00000594387 ANKUB1A6NFN9 424 aa16.26■□□□□ 0.19
IRF3-208ENST00000594387 H0YIV9 168 aa16.26■□□□□ 0.19
IRF3-208ENST00000594387 FCHO1O14526 889 aa16.26■□□□□ 0.19
IRF3-208ENST00000594387 PRAMEF2O60811 474 aa16.26■□□□□ 0.19
IRF3-208ENST00000594387 CTNSO60931 367 aa16.26■□□□□ 0.19
IRF3-208ENST00000594387 SIX3O95343 332 aaPredicted RBP16.26■□□□□ 0.19
IRF3-208ENST00000594387 CRYABP02511 175 aaKnown RBP16.26■□□□□ 0.19
IRF3-208ENST00000594387 TNNI3P19429 210 aa16.26■□□□□ 0.19
IRF3-208ENST00000594387 CPN2P22792 545 aa16.26■□□□□ 0.19
IRF3-208ENST00000594387 ATP5A1P25705 553 aaKnown RBP16.26■□□□□ 0.19
IRF3-208ENST00000594387 CLCN2P51788 898 aa16.26■□□□□ 0.19
IRF3-208ENST00000594387 ARFIP1P53367 373 aa16.26■□□□□ 0.19
IRF3-208ENST00000594387 OC90Q02509 493 aaPredicted RBP16.26■□□□□ 0.19
IRF3-208ENST00000594387 SLC29A2Q14542 456 aa16.26■□□□□ 0.19
IRF3-208ENST00000594387 DEPDC1Q5TB30 811 aa16.26■□□□□ 0.19
IRF3-208ENST00000594387 FCRLBQ6BAA4 426 aa16.26■□□□□ 0.19
IRF3-208ENST00000594387 OR4C11Q6IEV9 310 aa16.26■□□□□ 0.19
IRF3-208ENST00000594387 LCA5Q86VQ0 697 aa16.26■□□□□ 0.19
IRF3-208ENST00000594387 CRLF3Q8IUI8 442 aa16.26■□□□□ 0.19
IRF3-208ENST00000594387 LGI4Q8N135 537 aa16.26■□□□□ 0.19
IRF3-208ENST00000594387 BEST3Q8N1M1 668 aa16.26■□□□□ 0.19
IRF3-208ENST00000594387 TMEM132CQ8N3T6 1108 aa16.26■□□□□ 0.19
IRF3-208ENST00000594387 ACOT4Q8N9L9 421 aa16.26■□□□□ 0.19
IRF3-208ENST00000594387 HUS1BQ8NHY5 278 aa16.26■□□□□ 0.19
IRF3-208ENST00000594387 GRHL3Q8TE85 626 aa16.26■□□□□ 0.19
IRF3-208ENST00000594387 FAR1Q8WVX9 515 aa16.26■□□□□ 0.19
IRF3-208ENST00000594387 OR51B5Q9H339 312 aa16.26■□□□□ 0.19
IRF3-208ENST00000594387 CDCP1Q9H5V8 836 aa16.26■□□□□ 0.19
IRF3-208ENST00000594387 OLAHQ9NV23 265 aa16.26■□□□□ 0.19
IRF3-208ENST00000594387 PSMC3IPQ9P2W1 217 aaPredicted RBP16.26■□□□□ 0.19
IRF3-208ENST00000594387 FETUBQ9UGM5 382 aa16.26■□□□□ 0.19
IRF3-208ENST00000594387 CLCA3PQ9Y6N3 262 aa16.26■□□□□ 0.19
IRF3-208ENST00000594387 SVILO95425 2214 aa16.25■□□□□ 0.19
IRF3-208ENST00000594387 IGKV3D-11A0A0A0MRZ8 115 aa16.25■□□□□ 0.19
IRF3-208ENST00000594387 SAP18O00422 153 aaKnown RBP16.25■□□□□ 0.19
IRF3-208ENST00000594387 E2F3O00716 465 aa16.25■□□□□ 0.19
IRF3-208ENST00000594387 MYO1DO94832 1006 aa16.25■□□□□ 0.19
IRF3-208ENST00000594387 RASAL1O95294 804 aa16.25■□□□□ 0.19
IRF3-208ENST00000594387 CD46P15529 392 aa16.25■□□□□ 0.19
IRF3-208ENST00000594387 HIST1H1TP22492 207 aaPredicted RBP16.25■□□□□ 0.19
IRF3-208ENST00000594387 SERTAD2Q14140 314 aa16.25■□□□□ 0.19
IRF3-208ENST00000594387 TERF2Q15554 542 aa16.25■□□□□ 0.19
IRF3-208ENST00000594387 EIF2S3LQ2VIR3 472 aaKnown RBP16.25■□□□□ 0.19
IRF3-208ENST00000594387 TIFABQ6ZNK6 161 aa16.25■□□□□ 0.19
IRF3-208ENST00000594387 MILR1Q7Z6M3 343 aa16.25■□□□□ 0.19
IRF3-208ENST00000594387 CLNKQ7Z7G1 428 aa16.25■□□□□ 0.19
IRF3-208ENST00000594387 L3MBTL4Q8NA19 623 aa16.25■□□□□ 0.19
IRF3-208ENST00000594387 FAM98AQ8NCA5 519 aaKnown RBP16.25■□□□□ 0.19
IRF3-208ENST00000594387 B3GNT7Q8NFL0 401 aa16.25■□□□□ 0.19
IRF3-208ENST00000594387 ELP5Q8TE02 316 aa16.25■□□□□ 0.19
IRF3-208ENST00000594387 UBLCP1Q8WVY7 318 aaPredicted RBP16.25■□□□□ 0.19
IRF3-208ENST00000594387 C5orf34Q96MH7 638 aa16.25■□□□□ 0.19
IRF3-208ENST00000594387 ADAP2Q9NPF8 381 aa16.25■□□□□ 0.19
IRF3-208ENST00000594387 AHSPQ9NZD4 102 aa16.25■□□□□ 0.19
IRF3-208ENST00000594387 PHF11Q9UIL8 331 aa16.25■□□□□ 0.19
IRF3-208ENST00000594387 FBXW2Q9UKT8 454 aa16.25■□□□□ 0.19
IRF3-208ENST00000594387 LRRC14BA6NHZ5 514 aa16.24■□□□□ 0.19
IRF3-208ENST00000594387 GABRR3A8MPY1 467 aa16.24■□□□□ 0.19
IRF3-208ENST00000594387 RTCAO00442 366 aaKnown RBP16.24■□□□□ 0.19
IRF3-208ENST00000594387 DYRK3O43781 588 aa16.24■□□□□ 0.19
IRF3-208ENST00000594387 CBX6O95503 412 aa16.24■□□□□ 0.19
IRF3-208ENST00000594387 TBX6O95947 436 aaPredicted RBP16.24■□□□□ 0.19
IRF3-208ENST00000594387 FAM153BP0C7A2 387 aa16.24■□□□□ 0.19
IRF3-208ENST00000594387 EDN3P14138 238 aa16.24■□□□□ 0.19
IRF3-208ENST00000594387 RPS13P62277 151 aaKnown RBP16.24■□□□□ 0.19
IRF3-208ENST00000594387 IFT88Q13099 833 aa16.24■□□□□ 0.19
IRF3-208ENST00000594387 SLAMF1Q13291 335 aa16.24■□□□□ 0.19
IRF3-208ENST00000594387 BIKQ13323 160 aa16.24■□□□□ 0.19
IRF3-208ENST00000594387 MRPL49Q13405 166 aaKnown RBP16.24■□□□□ 0.19
IRF3-208ENST00000594387 ZRSR2Q15696 482 aaKnown RBP16.24■□□□□ 0.19
IRF3-208ENST00000594387 FAM153CQ494X1 144 aa16.24■□□□□ 0.19
IRF3-208ENST00000594387 ZNF766Q5HY98 468 aa16.24■□□□□ 0.19
IRF3-208ENST00000594387 C10orf62Q5T681 223 aaPredicted RBP16.24■□□□□ 0.19
IRF3-208ENST00000594387 CYP20A1Q6UW02 462 aa16.24■□□□□ 0.19
IRF3-208ENST00000594387 SCUBE1Q8IWY4 988 aa16.24■□□□□ 0.19
IRF3-208ENST00000594387 TMEM178AQ8NBL3 297 aa16.24■□□□□ 0.19
IRF3-208ENST00000594387 ST6GALNAC3Q8NDV1 305 aa16.24■□□□□ 0.19
IRF3-208ENST00000594387 DNAJB8Q8NHS0 232 aa16.24■□□□□ 0.19
IRF3-208ENST00000594387 ACMSDQ8TDX5 336 aa16.24■□□□□ 0.19
IRF3-208ENST00000594387 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.24■□□□□ 0.197e-8■■■■■ 60.2
IRF3-208ENST00000594387 DAZLQ92904 295 aaKnown RBP16.24■□□□□ 0.19
IRF3-208ENST00000594387 VMP1Q96GC9 406 aa16.24■□□□□ 0.19
IRF3-208ENST00000594387 MAPKAP1Q9BPZ7 522 aa16.24■□□□□ 0.19
IRF3-208ENST00000594387 NTMT1Q9BV86 223 aa16.24■□□□□ 0.19
IRF3-208ENST00000594387 ALOXE3Q9BYJ1 711 aa16.24■□□□□ 0.19
IRF3-208ENST00000594387 WDR41Q9HAD4 459 aa16.24■□□□□ 0.19
IRF3-208ENST00000594387 SEMA4BQ9NPR2 832 aaPredicted RBP16.24■□□□□ 0.19
IRF3-208ENST00000594387 DMRT3Q9NQL9 472 aa16.24■□□□□ 0.19
IRF3-208ENST00000594387 PSD3Q9NYI0 1048 aa16.24■□□□□ 0.19
IRF3-208ENST00000594387 RNF11Q9Y3C5 154 aa16.24■□□□□ 0.19
IRF3-208ENST00000594387 CROCCQ5TZA2 2017 aa16.23■□□□□ 0.19
IRF3-208ENST00000594387 CYR61O00622 381 aa16.23■□□□□ 0.19
IRF3-208ENST00000594387 MLYCDO95822 493 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms