RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 LRATO95237 230 aa12.78□□□□□ -0.36
VMP1-217ENST00000593168 ZBTB11O95625 1053 aaPredicted RBP12.78□□□□□ -0.36
VMP1-217ENST00000593168 GBAP04062 536 aa12.78□□□□□ -0.36
VMP1-217ENST00000593168 COX7A2P14406 83 aa12.78□□□□□ -0.36
VMP1-217ENST00000593168 HIST1H1TP22492 207 aaPredicted RBP12.78□□□□□ -0.36
VMP1-217ENST00000593168 ATP5A1P25705 553 aaKnown RBP12.78□□□□□ -0.36
VMP1-217ENST00000593168 HPCAL1P37235 193 aa12.78□□□□□ -0.36
VMP1-217ENST00000593168 SSR2P43308 183 aa12.78□□□□□ -0.36
VMP1-217ENST00000593168 KIR3DL1P43629 444 aa12.78□□□□□ -0.36
VMP1-217ENST00000593168 DUSP3P51452 185 aaPredicted RBP12.78□□□□□ -0.36
VMP1-217ENST00000593168 HNRNPFP52597 415 aaKnown RBP12.78□□□□□ -0.36
VMP1-217ENST00000593168 MAPK12P53778 367 aa12.78□□□□□ -0.36
VMP1-217ENST00000593168 TAS2R50P59544 299 aa12.78□□□□□ -0.36
VMP1-217ENST00000593168 PSME3P61289 254 aa12.78□□□□□ -0.36
VMP1-217ENST00000593168 PHC1P78364 1004 aa12.78□□□□□ -0.36
VMP1-217ENST00000593168 CFHR1Q03591 330 aa12.78□□□□□ -0.36
VMP1-217ENST00000593168 C2orf80Q0P641 193 aa12.78□□□□□ -0.36
VMP1-217ENST00000593168 PDE7AQ13946 482 aa12.78□□□□□ -0.36
VMP1-217ENST00000593168 MAPKAPK3Q16644 382 aa12.78□□□□□ -0.36
VMP1-217ENST00000593168 TRMT5Q32P41 509 aaKnown RBP12.78□□□□□ -0.36
VMP1-217ENST00000593168 PROX2Q3B8N5 592 aa12.78□□□□□ -0.36
VMP1-217ENST00000593168 AMZ1Q400G9 498 aa12.78□□□□□ -0.36
VMP1-217ENST00000593168 PAGE3Q5JUK9 113 aa12.78□□□□□ -0.36
VMP1-217ENST00000593168 CPTPQ5TA50 214 aa12.78□□□□□ -0.36
VMP1-217ENST00000593168 FRMPD2BQ6IN97 320 aa12.78□□□□□ -0.36
VMP1-217ENST00000593168 PRMT9Q6P2P2 845 aa12.78□□□□□ -0.36
VMP1-217ENST00000593168 PGM2L1Q6PCE3 622 aa12.78□□□□□ -0.36
VMP1-217ENST00000593168 GPR180Q86V85 440 aa12.78□□□□□ -0.36
VMP1-217ENST00000593168 MCATQ8IVS2 390 aaKnown RBP12.78□□□□□ -0.36
VMP1-217ENST00000593168 OR4N4Q8N0Y3 316 aa12.78□□□□□ -0.36
VMP1-217ENST00000593168 Q8N9G6 341 aaPredicted RBP12.78□□□□□ -0.36
VMP1-217ENST00000593168 KCT2Q8NC54 265 aa12.78□□□□□ -0.36
VMP1-217ENST00000593168 DNAJB8Q8NHS0 232 aa12.78□□□□□ -0.36
VMP1-217ENST00000593168 UTP15Q8TED0 518 aaKnown RBP12.78□□□□□ -0.36
VMP1-217ENST00000593168 NUDT8Q8WV74 236 aa12.78□□□□□ -0.36
VMP1-217ENST00000593168 GFM2Q969S9 779 aaKnown RBP12.78□□□□□ -0.36
VMP1-217ENST00000593168 TM4SF18Q96CE8 201 aa12.78□□□□□ -0.36
VMP1-217ENST00000593168 LRRC58Q96CX6 371 aa12.78□□□□□ -0.36
VMP1-217ENST00000593168 NXPE2Q96DL1 559 aa12.78□□□□□ -0.36
VMP1-217ENST00000593168 ZNF285Q96NJ3 590 aa12.78□□□□□ -0.36
VMP1-217ENST00000593168 TEFMQ96QE5 360 aaKnown RBP12.78□□□□□ -0.36
VMP1-217ENST00000593168 OR52E6Q96RD3 313 aa12.78□□□□□ -0.36
VMP1-217ENST00000593168 GPATCH1Q9BRR8 931 aaKnown RBP12.78□□□□□ -0.36
VMP1-217ENST00000593168 NLNQ9BYT8 704 aa12.78□□□□□ -0.36
VMP1-217ENST00000593168 RMND5AQ9H871 391 aa12.78□□□□□ -0.36
VMP1-217ENST00000593168 EXO1Q9UQ84 846 aaKnown RBP12.78□□□□□ -0.36
VMP1-217ENST00000593168 MAN2B2Q9Y2E5 1009 aa12.78□□□□□ -0.36
VMP1-217ENST00000593168 PCDHGA7Q9Y5G6 932 aa12.78□□□□□ -0.36
VMP1-217ENST00000593168 A0A088AWK7 358 aa12.77□□□□□ -0.37
VMP1-217ENST00000593168 IGHV5-51A0A0C4DH38 117 aa12.77□□□□□ -0.37
VMP1-217ENST00000593168 CPED1A4D0V7 1026 aa12.77□□□□□ -0.37
VMP1-217ENST00000593168 FXYD1O00168 92 aa12.77□□□□□ -0.37
VMP1-217ENST00000593168 TOX3O15405 576 aaPredicted RBP12.77□□□□□ -0.37
VMP1-217ENST00000593168 P2RX6O15547 441 aa12.77□□□□□ -0.37
VMP1-217ENST00000593168 TMPRSS11DO60235 418 aa12.77□□□□□ -0.37
VMP1-217ENST00000593168 STATHP02808 62 aa12.77□□□□□ -0.37
VMP1-217ENST00000593168 IL3P08700 152 aa12.77□□□□□ -0.37
VMP1-217ENST00000593168 FURINP09958 794 aa12.77□□□□□ -0.37
VMP1-217ENST00000593168 PIM1P11309 404 aaPredicted RBP12.77□□□□□ -0.37
VMP1-217ENST00000593168 CKMT1AP12532 417 aa12.77□□□□□ -0.37
VMP1-217ENST00000593168 PLA2G2AP14555 144 aa12.77□□□□□ -0.37
VMP1-217ENST00000593168 DDX5P17844 614 aaKnown RBP12.77□□□□□ -0.37
VMP1-217ENST00000593168 GABRA4P48169 554 aa12.77□□□□□ -0.37
VMP1-217ENST00000593168 KLC1Q07866 573 aa12.77□□□□□ -0.37
VMP1-217ENST00000593168 LRRC74AQ0VAA2 488 aa12.77□□□□□ -0.37
VMP1-217ENST00000593168 NFYCQ13952 458 aa12.77□□□□□ -0.37
VMP1-217ENST00000593168 SLC9A5Q14940 896 aa12.77□□□□□ -0.37
VMP1-217ENST00000593168 HEPACAMQ14CZ8 416 aa12.77□□□□□ -0.37
VMP1-217ENST00000593168 CLPPQ16740 277 aaPredicted RBP12.77□□□□□ -0.37
VMP1-217ENST00000593168 PGS1Q32NB8 556 aa12.77□□□□□ -0.37
VMP1-217ENST00000593168 INAVAQ3KP66 663 aa12.77□□□□□ -0.37
VMP1-217ENST00000593168 ANXA8L1Q5VT79 327 aa12.77□□□□□ -0.37
VMP1-217ENST00000593168 MRM1Q6IN84 353 aaKnown RBP12.77□□□□□ -0.37
VMP1-217ENST00000593168 GUSBP11Q6P575 273 aa12.77□□□□□ -0.37
VMP1-217ENST00000593168 TMEM71Q6P5X7 295 aa12.77□□□□□ -0.37
VMP1-217ENST00000593168 SLC2A7Q6PXP3 512 aa12.77□□□□□ -0.37
VMP1-217ENST00000593168 DLEU7Q6UYE1 221 aa12.77□□□□□ -0.37
VMP1-217ENST00000593168 ZNF793Q6ZN11 406 aa12.77□□□□□ -0.37
VMP1-217ENST00000593168 BNC2Q6ZN30 1099 aaPredicted RBP12.77□□□□□ -0.37
VMP1-217ENST00000593168 RIPOR1Q6ZS17 1223 aa12.77□□□□□ -0.37
VMP1-217ENST00000593168 ABHD13Q7L211 337 aa12.77□□□□□ -0.37
VMP1-217ENST00000593168 PRSS42Q7Z5A4 293 aa12.77□□□□□ -0.37
VMP1-217ENST00000593168 KMT5CQ86Y97 462 aa12.77□□□□□ -0.37
VMP1-217ENST00000593168 SCUBE1Q8IWY4 988 aa12.77□□□□□ -0.37
VMP1-217ENST00000593168 NATD1Q8N6N6 113 aa12.77□□□□□ -0.37
VMP1-217ENST00000593168 CSNK1A1LQ8N752 337 aa12.77□□□□□ -0.37
VMP1-217ENST00000593168 ACOT4Q8N9L9 421 aa12.77□□□□□ -0.37
VMP1-217ENST00000593168 OR7A2PQ8NGA2 310 aa12.77□□□□□ -0.37
VMP1-217ENST00000593168 CDC26Q8NHZ8 85 aa12.77□□□□□ -0.37
VMP1-217ENST00000593168 GTF2H4Q92759 462 aa12.77□□□□□ -0.37
VMP1-217ENST00000593168 ZNF764Q96H86 408 aaPredicted RBP12.77□□□□□ -0.37
VMP1-217ENST00000593168 ITCHQ96J02 903 aa12.77□□□□□ -0.37
VMP1-217ENST00000593168 CNDP2Q96KP4 475 aaKnown RBP12.77□□□□□ -0.37
VMP1-217ENST00000593168 CDRT15Q96T59 188 aa12.77□□□□□ -0.37
VMP1-217ENST00000593168 CCDC3Q9BQI4 270 aa12.77□□□□□ -0.37
VMP1-217ENST00000593168 DUSP26Q9BV47 211 aa12.77□□□□□ -0.37
VMP1-217ENST00000593168 BHLHE41Q9C0J9 482 aaPredicted RBP12.77□□□□□ -0.37
VMP1-217ENST00000593168 PDE7BQ9NP56 450 aa12.77□□□□□ -0.37
VMP1-217ENST00000593168 ATAD3AQ9NVI7 634 aa12.77□□□□□ -0.37
VMP1-217ENST00000593168 FAM120CQ9NX05 1096 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms