RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 PRAMEF4O60810 478 aa10.38□□□□□ -0.75
PRKCSH-220ENST00000593104 LDB3O75112 727 aa10.38□□□□□ -0.75
PRKCSH-220ENST00000593104 PIAS1O75925 651 aa10.38□□□□□ -0.75
PRKCSH-220ENST00000593104 ZFAND5O76080 213 aa10.38□□□□□ -0.75
PRKCSH-220ENST00000593104 GLSO94925 669 aaPredicted RBP10.38□□□□□ -0.75
PRKCSH-220ENST00000593104 SERPINA6P08185 405 aa10.38□□□□□ -0.75
PRKCSH-220ENST00000593104 NCF1P14598 390 aaPredicted RBP10.38□□□□□ -0.75
PRKCSH-220ENST00000593104 KLK2P20151 261 aa10.38□□□□□ -0.75
PRKCSH-220ENST00000593104 PIGAP37287 484 aa10.38□□□□□ -0.75
PRKCSH-220ENST00000593104 RAB38P57729 211 aa10.38□□□□□ -0.75
PRKCSH-220ENST00000593104 FOXD4Q12950 439 aaPredicted RBP10.38□□□□□ -0.75
PRKCSH-220ENST00000593104 SLBPQ14493 270 aaKnown RBP eCLIP10.38□□□□□ -0.75
PRKCSH-220ENST00000593104 BBS9Q3SYG4 887 aa10.38□□□□□ -0.75
PRKCSH-220ENST00000593104 TEDDM1Q5T9Z0 273 aa10.38□□□□□ -0.75
PRKCSH-220ENST00000593104 PRAMEF9Q5VWM5 478 aa10.38□□□□□ -0.75
PRKCSH-220ENST00000593104 CES4AQ5XG92 561 aa10.38□□□□□ -0.75
PRKCSH-220ENST00000593104 KIAA0408Q6ZU52 694 aa10.38□□□□□ -0.75
PRKCSH-220ENST00000593104 TRILQ7L0X0 811 aa10.38□□□□□ -0.75
PRKCSH-220ENST00000593104 TGIF2LYQ8IUE0 185 aa10.38□□□□□ -0.75
PRKCSH-220ENST00000593104 LMNTD2Q8IXW0 634 aa10.38□□□□□ -0.75
PRKCSH-220ENST00000593104 KLHDC8AQ8IYD2 350 aa10.38□□□□□ -0.75
PRKCSH-220ENST00000593104 SPATA6LQ8N4H0 392 aa10.38□□□□□ -0.75
PRKCSH-220ENST00000593104 TBC1D19Q8N5T2 526 aa10.38□□□□□ -0.75
PRKCSH-220ENST00000593104 ARMC2Q8NEN0 867 aa10.38□□□□□ -0.75
PRKCSH-220ENST00000593104 TRPV3Q8NET8 790 aa10.38□□□□□ -0.75
PRKCSH-220ENST00000593104 ANKRD49Q8WVL7 239 aa10.38□□□□□ -0.75
PRKCSH-220ENST00000593104 MS4A6EQ96DS6 147 aa10.38□□□□□ -0.75
PRKCSH-220ENST00000593104 CERS2Q96G23 380 aa10.38□□□□□ -0.75
PRKCSH-220ENST00000593104 QRFPRQ96P65 431 aa10.38□□□□□ -0.75
PRKCSH-220ENST00000593104 EGFL8Q99944 293 aa10.38□□□□□ -0.75
PRKCSH-220ENST00000593104 SMR3AQ99954 134 aa10.38□□□□□ -0.75
PRKCSH-220ENST00000593104 CCDC77Q9BR77 488 aa10.38□□□□□ -0.75
PRKCSH-220ENST00000593104 POLDIP3Q9BY77 421 aaKnown RBP10.38□□□□□ -0.75
PRKCSH-220ENST00000593104 OR8D2Q9GZM6 311 aa10.38□□□□□ -0.75
PRKCSH-220ENST00000593104 PELI2Q9HAT8 420 aa10.38□□□□□ -0.75
PRKCSH-220ENST00000593104 PPANQ9NQ55 473 aaKnown RBP10.38□□□□□ -0.75
PRKCSH-220ENST00000593104 IGSF5Q9NSI5 407 aa10.38□□□□□ -0.75
PRKCSH-220ENST00000593104 TUBA8Q9NY65 449 aaPredicted RBP10.38□□□□□ -0.75
PRKCSH-220ENST00000593104 MYOTQ9UBF9 498 aa10.38□□□□□ -0.75
PRKCSH-220ENST00000593104 KCNN3Q9UGI6 736 aa10.38□□□□□ -0.75
PRKCSH-220ENST00000593104 PPIEQ9UNP9 301 aaKnown RBP10.38□□□□□ -0.75
PRKCSH-220ENST00000593104 CHMP2BQ9UQN3 213 aa10.38□□□□□ -0.75
PRKCSH-220ENST00000593104 YARS2Q9Y2Z4 477 aaKnown RBP10.38□□□□□ -0.75
PRKCSH-220ENST00000593104 MMACHCQ9Y4U1 282 aa10.38□□□□□ -0.75
PRKCSH-220ENST00000593104 PSAT1Q9Y617 370 aa10.38□□□□□ -0.75
PRKCSH-220ENST00000593104 FREM3P0C091 2139 aa10.37□□□□□ -0.75
PRKCSH-220ENST00000593104 PABPN1LA6NDY0 278 aaKnown RBP10.37□□□□□ -0.75
PRKCSH-220ENST00000593104 ACOT7O00154 380 aa10.37□□□□□ -0.75
PRKCSH-220ENST00000593104 RTCAO00442 366 aaKnown RBP10.37□□□□□ -0.75
PRKCSH-220ENST00000593104 CYR61O00622 381 aa10.37□□□□□ -0.75
PRKCSH-220ENST00000593104 CTAG2O75638 210 aa10.37□□□□□ -0.75
PRKCSH-220ENST00000593104 WDR47O94967 919 aa10.37□□□□□ -0.75
PRKCSH-220ENST00000593104 RFPL3SP0C7P2 107 aa10.37□□□□□ -0.75
PRKCSH-220ENST00000593104 CDC25BP30305 580 aa10.37□□□□□ -0.75
PRKCSH-220ENST00000593104 GMPRP36959 345 aa10.37□□□□□ -0.75
PRKCSH-220ENST00000593104 ZFP36L2P47974 494 aaKnown RBP10.37□□□□□ -0.75
PRKCSH-220ENST00000593104 LIM2P55344 173 aa10.37□□□□□ -0.75
PRKCSH-220ENST00000593104 AP1S2P56377 157 aa10.37□□□□□ -0.75
PRKCSH-220ENST00000593104 SKP1P63208 163 aa10.37□□□□□ -0.75
PRKCSH-220ENST00000593104 PRAMEF20Q5VT98 475 aa10.37□□□□□ -0.75
PRKCSH-220ENST00000593104 B3GNT6Q6ZMB0 384 aa10.37□□□□□ -0.75
PRKCSH-220ENST00000593104 DGAT2L6Q6ZPD8 337 aa10.37□□□□□ -0.75
PRKCSH-220ENST00000593104 FAM47EQ6ZV65 393 aa10.37□□□□□ -0.75
PRKCSH-220ENST00000593104 SEM1Q6ZVN7 128 aa10.37□□□□□ -0.75
PRKCSH-220ENST00000593104 ACAD11Q709F0 780 aa10.37□□□□□ -0.75
PRKCSH-220ENST00000593104 CNTN4Q8IWV2 1026 aa10.37□□□□□ -0.75
PRKCSH-220ENST00000593104 OR4N5Q8IXE1 308 aa10.37□□□□□ -0.75
PRKCSH-220ENST00000593104 PPIL6Q8IXY8 311 aa10.37□□□□□ -0.75
PRKCSH-220ENST00000593104 RASGEF1CQ8N431 466 aa10.37□□□□□ -0.75
PRKCSH-220ENST00000593104 PTPMT1Q8WUK0 201 aaPredicted RBP10.37□□□□□ -0.75
PRKCSH-220ENST00000593104 GAL3ST3Q96A11 431 aa10.37□□□□□ -0.75
PRKCSH-220ENST00000593104 KIAA1191Q96A73 305 aa10.37□□□□□ -0.75
PRKCSH-220ENST00000593104 FAR2Q96K12 515 aa10.37□□□□□ -0.75
PRKCSH-220ENST00000593104 CAPZA3Q96KX2 299 aa10.37□□□□□ -0.75
PRKCSH-220ENST00000593104 TRIM54Q9BYV2 358 aa10.37□□□□□ -0.75
PRKCSH-220ENST00000593104 ADAP2Q9NPF8 381 aa10.37□□□□□ -0.75
PRKCSH-220ENST00000593104 HOMER3Q9NSC5 361 aa10.37□□□□□ -0.75
PRKCSH-220ENST00000593104 CRIM1Q9NZV1 1036 aa10.37□□□□□ -0.75
PRKCSH-220ENST00000593104 ACAD8Q9UKU7 415 aa10.37□□□□□ -0.75
PRKCSH-220ENST00000593104 VWA7Q9Y334 891 aa10.37□□□□□ -0.75
PRKCSH-220ENST00000593104 NINQ8N4C6 2090 aa10.37□□□□□ -0.75
PRKCSH-220ENST00000593104 ZNF469Q96JG9 3925 aaPredicted RBP10.37□□□□□ -0.75
PRKCSH-220ENST00000593104 MTORP42345 2549 aa10.36□□□□□ -0.75
PRKCSH-220ENST00000593104 LRIT2A6NDA9 550 aa10.36□□□□□ -0.75
PRKCSH-220ENST00000593104 URADA6NGE7 173 aa10.36□□□□□ -0.75
PRKCSH-220ENST00000593104 HRKO00198 91 aa10.36□□□□□ -0.75
PRKCSH-220ENST00000593104 PROM1O43490 865 aa10.36□□□□□ -0.75
PRKCSH-220ENST00000593104 ETHE1O95571 254 aa10.36□□□□□ -0.75
PRKCSH-220ENST00000593104 C1GALT1C1LP0DN25 315 aa10.36□□□□□ -0.75
PRKCSH-220ENST00000593104 ZNF37AP17032 561 aaPredicted RBP10.36□□□□□ -0.75
PRKCSH-220ENST00000593104 ELK3P41970 407 aa10.36□□□□□ -0.75
PRKCSH-220ENST00000593104 HSD17B7P56937 341 aa10.36□□□□□ -0.75
PRKCSH-220ENST00000593104 FOXO1Q12778 655 aa10.36□□□□□ -0.75
PRKCSH-220ENST00000593104 ASPHQ12797 758 aa10.36□□□□□ -0.75
PRKCSH-220ENST00000593104 TSNQ15631 228 aaKnown RBP10.36□□□□□ -0.75
PRKCSH-220ENST00000593104 CYP1B1Q16678 543 aa10.36□□□□□ -0.75
PRKCSH-220ENST00000593104 SPANXN3Q5MJ09 141 aa10.36□□□□□ -0.75
PRKCSH-220ENST00000593104 ARMC3Q5W041 872 aa10.36□□□□□ -0.75
PRKCSH-220ENST00000593104 PAOXQ6QHF9 649 aa10.36□□□□□ -0.75
PRKCSH-220ENST00000593104 ARSKQ6UWY0 536 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms