RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 COPS8Q99627 209 aa14.55□□□□□ -0.08
CIRBP-228ENST00000590347 ANKRA2Q9H9E1 313 aa14.55□□□□□ -0.08
CIRBP-228ENST00000590347 AGO3Q9H9G7 860 aaKnown RBP14.55□□□□□ -0.08
CIRBP-228ENST00000590347 ZNF624Q9P2J8 865 aaPredicted RBP14.55□□□□□ -0.08
CIRBP-228ENST00000590347 PPT2Q9UMR5 302 aa14.55□□□□□ -0.08
CIRBP-228ENST00000590347 PCDHGA2Q9Y5H1 932 aa14.55□□□□□ -0.08
CIRBP-228ENST00000590347 hCG_1807616A0A1W2PRN6 198 aa14.55□□□□□ -0.08
CIRBP-228ENST00000590347 CLIC1O00299 241 aa14.55□□□□□ -0.08
CIRBP-228ENST00000590347 STX16O14662 325 aa14.55□□□□□ -0.08
CIRBP-228ENST00000590347 CASKO14936 926 aa14.55□□□□□ -0.08
CIRBP-228ENST00000590347 PBX3P40426 434 aa14.55□□□□□ -0.08
CIRBP-228ENST00000590347 CAPZA2P47755 286 aa14.55□□□□□ -0.08
CIRBP-228ENST00000590347 GTF2H2Q13888 395 aa14.55□□□□□ -0.08
CIRBP-228ENST00000590347 GPR176Q14439 515 aa14.55□□□□□ -0.08
CIRBP-228ENST00000590347 DUSP6Q16828 381 aa14.55□□□□□ -0.08
CIRBP-228ENST00000590347 MARCH8Q5T0T0 291 aa14.55□□□□□ -0.08
CIRBP-228ENST00000590347 SLC6A19Q695T7 634 aa14.55□□□□□ -0.08
CIRBP-228ENST00000590347 MRNIPQ6NTE8 343 aa14.55□□□□□ -0.08
CIRBP-228ENST00000590347 GTF2H2CQ6P1K8 395 aa14.55□□□□□ -0.08
CIRBP-228ENST00000590347 ZNF600Q6ZNG1 722 aa14.55□□□□□ -0.08
CIRBP-228ENST00000590347 PIANPQ8IYJ0 282 aa14.55□□□□□ -0.08
CIRBP-228ENST00000590347 RHEBL1Q8TAI7 183 aa14.55□□□□□ -0.08
CIRBP-228ENST00000590347 KATNB1Q9BVA0 655 aa14.55□□□□□ -0.08
CIRBP-228ENST00000590347 TAPBPLQ9BX59 468 aa14.55□□□□□ -0.08
CIRBP-228ENST00000590347 TINAGL1Q9GZM7 467 aaPredicted RBP14.55□□□□□ -0.08
CIRBP-228ENST00000590347 SNX11Q9Y5W9 270 aa14.55□□□□□ -0.08
CIRBP-228ENST00000590347 C2orf92A0A1B0GVN3 265 aa14.54□□□□□ -0.08
CIRBP-228ENST00000590347 KHNYNO15037 678 aaKnown RBP14.54□□□□□ -0.08
CIRBP-228ENST00000590347 F9P00740 461 aa14.54□□□□□ -0.08
CIRBP-228ENST00000590347 DRD5P21918 477 aa14.54□□□□□ -0.08
CIRBP-228ENST00000590347 CCNCP24863 283 aa14.54□□□□□ -0.08
CIRBP-228ENST00000590347 HAAOP46952 286 aa14.54□□□□□ -0.08
CIRBP-228ENST00000590347 DAOAP59103 153 aa14.54□□□□□ -0.08
CIRBP-228ENST00000590347 PCDH1Q08174 1060 aa14.54□□□□□ -0.08
CIRBP-228ENST00000590347 ETFDHQ16134 617 aa14.54□□□□□ -0.08
CIRBP-228ENST00000590347 IQCCQ4KMZ1 466 aa14.54□□□□□ -0.08
CIRBP-228ENST00000590347 ATAT1Q5SQI0 421 aa14.54□□□□□ -0.08
CIRBP-228ENST00000590347 CALHM3Q86XJ0 350 aa14.54□□□□□ -0.08
CIRBP-228ENST00000590347 MEX3DQ86XN8 651 aaKnown RBP14.54□□□□□ -0.08
CIRBP-228ENST00000590347 IQCF1Q8N6M8 205 aa14.54□□□□□ -0.08
CIRBP-228ENST00000590347 MDGA1Q8NFP4 955 aa14.54□□□□□ -0.08
CIRBP-228ENST00000590347 WDR89Q96FK6 387 aaPredicted RBP14.54□□□□□ -0.08
CIRBP-228ENST00000590347 NTMT1Q9BV86 223 aa14.54□□□□□ -0.08
CIRBP-228ENST00000590347 GSX2Q9BZM3 304 aa14.54□□□□□ -0.08
CIRBP-228ENST00000590347 LRTM1Q9HBL6 345 aa14.54□□□□□ -0.08
CIRBP-228ENST00000590347 ERVK-19Q9WJR5 959 aa14.54□□□□□ -0.08
CIRBP-228ENST00000590347 GABRR3A8MPY1 467 aa14.54□□□□□ -0.08
CIRBP-228ENST00000590347 M0R233 179 aa14.54□□□□□ -0.08
CIRBP-228ENST00000590347 SOX4Q06945 474 aaPredicted RBP14.54□□□□□ -0.08
CIRBP-228ENST00000590347 TEAD4Q15561 434 aa14.54□□□□□ -0.08
CIRBP-228ENST00000590347 CLLU1Q5K131 121 aa14.54□□□□□ -0.08
CIRBP-228ENST00000590347 C9orf57Q5W0N0 161 aa14.54□□□□□ -0.08
CIRBP-228ENST00000590347 TMEM88Q6PEY1 159 aa14.54□□□□□ -0.08
CIRBP-228ENST00000590347 OR2T35Q8NGX2 323 aa14.54□□□□□ -0.08
CIRBP-228ENST00000590347 PSMG2Q969U7 264 aa14.54□□□□□ -0.08
CIRBP-228ENST00000590347 NELL2Q99435 816 aa14.54□□□□□ -0.08
CIRBP-228ENST00000590347 TINF2Q9BSI4 451 aa14.54□□□□□ -0.08
CIRBP-228ENST00000590347 MARVELD1Q9BSK0 173 aa14.54□□□□□ -0.08
CIRBP-228ENST00000590347 RNF39Q9H2S5 420 aa14.54□□□□□ -0.08
CIRBP-228ENST00000590347 NLGN3Q9NZ94 848 aa14.54□□□□□ -0.08
CIRBP-228ENST00000590347 HECAQ9UBI9 543 aaPredicted RBP14.54□□□□□ -0.08
CIRBP-228ENST00000590347 STUB1Q9UNE7 303 aa14.54□□□□□ -0.08
CIRBP-228ENST00000590347 AUP1Q9Y679 476 aa14.54□□□□□ -0.08
CIRBP-228ENST00000590347 MYBPHLA2RUH7 354 aa14.53□□□□□ -0.08
CIRBP-228ENST00000590347 EGFP01133 1207 aa14.53□□□□□ -0.08
CIRBP-228ENST00000590347 LPLP06858 475 aa14.53□□□□□ -0.08
CIRBP-228ENST00000590347 FAM157BP0CG42 384 aa14.53□□□□□ -0.08
CIRBP-228ENST00000590347 ZNF865P0CJ78 1059 aaPredicted RBP14.53□□□□□ -0.08
CIRBP-228ENST00000590347 RD3LP0DJH9 198 aa14.53□□□□□ -0.08
CIRBP-228ENST00000590347 RHCEP18577 417 aa14.53□□□□□ -0.08
CIRBP-228ENST00000590347 ABRQ12979 859 aa14.53□□□□□ -0.08
CIRBP-228ENST00000590347 MELKQ14680 651 aa14.53□□□□□ -0.08
CIRBP-228ENST00000590347 VMACQ2NL98 169 aa14.53□□□□□ -0.08
CIRBP-228ENST00000590347 ALFQ53S48 1182 aa14.53□□□□□ -0.08
CIRBP-228ENST00000590347 ATG9BQ674R7 924 aa14.53□□□□□ -0.08
CIRBP-228ENST00000590347 TSEN54Q7Z6J9 526 aaKnown RBP14.53□□□□□ -0.08
CIRBP-228ENST00000590347 C2CD4CQ8TF44 421 aa14.53□□□□□ -0.08
CIRBP-228ENST00000590347 DNAJB3Q8WWF6 145 aa14.53□□□□□ -0.08
CIRBP-228ENST00000590347 ATOH1Q92858 354 aaPredicted RBP14.53□□□□□ -0.08
CIRBP-228ENST00000590347 CRELD1Q96HD1 420 aa14.53□□□□□ -0.08
CIRBP-228ENST00000590347 RAD9AQ99638 391 aa14.53□□□□□ -0.08
CIRBP-228ENST00000590347 ABCG5Q9H222 651 aa14.53□□□□□ -0.08
CIRBP-228ENST00000590347 FLRT1Q9NZU1 646 aa14.53□□□□□ -0.08
CIRBP-228ENST00000590347 COPZ2Q9P299 210 aa14.53□□□□□ -0.08
CIRBP-228ENST00000590347 AFF4Q9UHB7 1163 aaKnown RBP14.53□□□□□ -0.08
CIRBP-228ENST00000590347 LHX6Q9UPM6 363 aa14.53□□□□□ -0.08
CIRBP-228ENST00000590347 CDH10Q9Y6N8 788 aa14.53□□□□□ -0.08
CIRBP-228ENST00000590347 PAGE1O75459 146 aa14.53□□□□□ -0.08
CIRBP-228ENST00000590347 ATG12O94817 140 aa14.53□□□□□ -0.08
CIRBP-228ENST00000590347 KCNK5O95279 499 aa14.53□□□□□ -0.08
CIRBP-228ENST00000590347 SCG5P05408 212 aa14.53□□□□□ -0.08
CIRBP-228ENST00000590347 GABRB1P18505 474 aa14.53□□□□□ -0.08
CIRBP-228ENST00000590347 HNMTP50135 292 aa14.53□□□□□ -0.08
CIRBP-228ENST00000590347 CCR6P51684 374 aa14.53□□□□□ -0.08
CIRBP-228ENST00000590347 CRYBA2P53672 197 aa14.53□□□□□ -0.08
CIRBP-228ENST00000590347 ANGPT1Q15389 498 aa14.53□□□□□ -0.08
CIRBP-228ENST00000590347 TMEM91Q6ZNR0 172 aa14.53□□□□□ -0.08
CIRBP-228ENST00000590347 LUZP2Q86TE4 346 aa14.53□□□□□ -0.08
CIRBP-228ENST00000590347 OR4K2Q8NGD2 314 aa14.53□□□□□ -0.08
CIRBP-228ENST00000590347 PPTC7Q8NI37 304 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms