RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 ELAVL1Q15717 326 aaKnown RBP16.71■□□□□ 0.27
PRKCSH-211ENST00000590098 HIST2H2ACQ16777 129 aaPredicted RBP16.71■□□□□ 0.27
PRKCSH-211ENST00000590098 ADPRMQ3LIE5 342 aa16.71■□□□□ 0.27
PRKCSH-211ENST00000590098 PAGE2BQ5JRK9 111 aa16.71■□□□□ 0.27
PRKCSH-211ENST00000590098 HIST2H2AA3Q6FI13 130 aa16.71■□□□□ 0.27
PRKCSH-211ENST00000590098 ABHD17CQ6PCB6 329 aa16.71■□□□□ 0.27
PRKCSH-211ENST00000590098 NCCRP1Q6ZVX7 275 aaPredicted RBP16.71■□□□□ 0.27
PRKCSH-211ENST00000590098 CLNKQ7Z7G1 428 aa16.71■□□□□ 0.27
PRKCSH-211ENST00000590098 CHERPQ8IWX8 916 aaKnown RBP16.71■□□□□ 0.27
PRKCSH-211ENST00000590098 TMEM52Q8NDY8 209 aa16.71■□□□□ 0.27
PRKCSH-211ENST00000590098 CPNE1Q99829 537 aa16.71■□□□□ 0.27
PRKCSH-211ENST00000590098 EFCAB11Q9BUY7 163 aa16.71■□□□□ 0.27
PRKCSH-211ENST00000590098 COQ3Q9NZJ6 369 aa16.71■□□□□ 0.27
PRKCSH-211ENST00000590098 CD274Q9NZQ7 290 aa16.71■□□□□ 0.27
PRKCSH-211ENST00000590098 ZNF490Q9ULM2 529 aaPredicted RBP16.71■□□□□ 0.27
PRKCSH-211ENST00000590098 PPT2Q9UMR5 302 aa16.71■□□□□ 0.27
PRKCSH-211ENST00000590098 CSMD2Q7Z408 3487 aa16.71■□□□□ 0.26
PRKCSH-211ENST00000590098 A0A1B0GTH9 108 aa16.7■□□□□ 0.26
PRKCSH-211ENST00000590098 A8MVJ9 347 aa16.7■□□□□ 0.26
PRKCSH-211ENST00000590098 CXorf49A8MYA2 514 aaPredicted RBP16.7■□□□□ 0.26
PRKCSH-211ENST00000590098 TGFBR3LH3BV60 316 aa16.7■□□□□ 0.26
PRKCSH-211ENST00000590098 HS6ST1O60243 411 aa16.7■□□□□ 0.26
PRKCSH-211ENST00000590098 CTNSO60931 367 aa16.7■□□□□ 0.26
PRKCSH-211ENST00000590098 WISP3O95389 354 aaPredicted RBP16.7■□□□□ 0.26
PRKCSH-211ENST00000590098 TUBB4AP04350 444 aa16.7■□□□□ 0.26
PRKCSH-211ENST00000590098 TPOP07202 933 aa16.7■□□□□ 0.26
PRKCSH-211ENST00000590098 CERS1P27544 350 aa16.7■□□□□ 0.26
PRKCSH-211ENST00000590098 KCNC1P48547 511 aa16.7■□□□□ 0.26
PRKCSH-211ENST00000590098 GPR143P51810 404 aa16.7■□□□□ 0.26
PRKCSH-211ENST00000590098 LIM2P55344 173 aa16.7■□□□□ 0.26
PRKCSH-211ENST00000590098 GPR85P60893 370 aa16.7■□□□□ 0.26
PRKCSH-211ENST00000590098 STX4Q12846 297 aa16.7■□□□□ 0.26
PRKCSH-211ENST00000590098 LAPTM5Q13571 262 aa16.7■□□□□ 0.26
PRKCSH-211ENST00000590098 DOC2AQ14183 400 aa16.7■□□□□ 0.26
PRKCSH-211ENST00000590098 EFTUD2Q15029 972 aaKnown RBP eCLIP16.7■□□□□ 0.267e-9■■■■■ 43.7
PRKCSH-211ENST00000590098 PDK4Q16654 411 aa16.7■□□□□ 0.26
PRKCSH-211ENST00000590098 FBXO48Q5FWF7 155 aa16.7■□□□□ 0.26
PRKCSH-211ENST00000590098 MDGA2Q7Z553 956 aa16.7■□□□□ 0.26
PRKCSH-211ENST00000590098 VN1R5Q7Z5H4 357 aa16.7■□□□□ 0.26
PRKCSH-211ENST00000590098 FGD2Q7Z6J4 655 aa16.7■□□□□ 0.26
PRKCSH-211ENST00000590098 GPALPP1Q8IXQ4 340 aa16.7■□□□□ 0.26
PRKCSH-211ENST00000590098 ZFP62Q8NB50 900 aaPredicted RBP16.7■□□□□ 0.26
PRKCSH-211ENST00000590098 C16orf52Q8NHV5 167 aa16.7■□□□□ 0.26
PRKCSH-211ENST00000590098 FAM57AQ8TBR7 257 aa16.7■□□□□ 0.26
PRKCSH-211ENST00000590098 CA5BP1Q8WTZ4 195 aa16.7■□□□□ 0.26
PRKCSH-211ENST00000590098 ASB15Q8WXK1 588 aa16.7■□□□□ 0.26
PRKCSH-211ENST00000590098 DAZLQ92904 295 aaKnown RBP16.7■□□□□ 0.26
PRKCSH-211ENST00000590098 KIAA1191Q96A73 305 aa16.7■□□□□ 0.26
PRKCSH-211ENST00000590098 ESAMQ96AP7 390 aa16.7■□□□□ 0.26
PRKCSH-211ENST00000590098 LURAP1Q96LR2 239 aa16.7■□□□□ 0.26
PRKCSH-211ENST00000590098 KCNC2Q96PR1 638 aa16.7■□□□□ 0.26
PRKCSH-211ENST00000590098 DMRTA2Q96SC8 542 aa16.7■□□□□ 0.26
PRKCSH-211ENST00000590098 TRIM8Q9BZR9 551 aa16.7■□□□□ 0.26
PRKCSH-211ENST00000590098 ROGDIQ9GZN7 287 aa16.7■□□□□ 0.26
PRKCSH-211ENST00000590098 HPF1Q9NWY4 346 aa16.7■□□□□ 0.26
PRKCSH-211ENST00000590098 KCMF1Q9P0J7 381 aa16.7■□□□□ 0.26
PRKCSH-211ENST00000590098 ZNF223Q9UK11 482 aaPredicted RBP16.7■□□□□ 0.26
PRKCSH-211ENST00000590098 RNF112Q9ULX5 631 aa16.7■□□□□ 0.26
PRKCSH-211ENST00000590098 DAPP1Q9UN19 280 aa16.7■□□□□ 0.26
PRKCSH-211ENST00000590098 CCDC168Q8NDH2 2452 aa16.69■□□□□ 0.26
PRKCSH-211ENST00000590098 C19orf84I3L1E1 186 aa16.69■□□□□ 0.26
PRKCSH-211ENST00000590098 CYR61O00622 381 aa16.69■□□□□ 0.26
PRKCSH-211ENST00000590098 ADAM10O14672 748 aa16.69■□□□□ 0.26
PRKCSH-211ENST00000590098 EIF3HO15372 352 aaKnown RBP eCLIP16.69■□□□□ 0.26
PRKCSH-211ENST00000590098 CCNT2O60583 730 aaKnown RBP16.69■□□□□ 0.26
PRKCSH-211ENST00000590098 OR2J2O76002 312 aa16.69■□□□□ 0.26
PRKCSH-211ENST00000590098 CD1DP15813 335 aa16.69■□□□□ 0.26
PRKCSH-211ENST00000590098 TNNI3P19429 210 aa16.69■□□□□ 0.26
PRKCSH-211ENST00000590098 SSTR2P30874 369 aa16.69■□□□□ 0.26
PRKCSH-211ENST00000590098 GP5P40197 560 aa16.69■□□□□ 0.26
PRKCSH-211ENST00000590098 MRPS25P82663 173 aaKnown RBP16.69■□□□□ 0.26
PRKCSH-211ENST00000590098 IRF8Q02556 426 aa16.69■□□□□ 0.26
PRKCSH-211ENST00000590098 OR4D1Q15615 310 aa16.69■□□□□ 0.26
PRKCSH-211ENST00000590098 HSDL2Q6YN16 418 aa16.69■□□□□ 0.26
PRKCSH-211ENST00000590098 MAATS1Q7Z4T9 603 aa16.69■□□□□ 0.26
PRKCSH-211ENST00000590098 SRFBP1Q8NEF9 429 aaKnown RBP16.69■□□□□ 0.26
PRKCSH-211ENST00000590098 SDCCAG3Q96C92 435 aa16.69■□□□□ 0.26
PRKCSH-211ENST00000590098 WDR34Q96EX3 536 aa16.69■□□□□ 0.26
PRKCSH-211ENST00000590098 F2RL3Q96RI0 385 aa16.69■□□□□ 0.26
PRKCSH-211ENST00000590098 CSF3RQ99062 836 aa16.69■□□□□ 0.26
PRKCSH-211ENST00000590098 GPR22Q99680 433 aa16.69■□□□□ 0.26
PRKCSH-211ENST00000590098 RBBP8Q99708 897 aa16.69■□□□□ 0.26
PRKCSH-211ENST00000590098 ERP44Q9BS26 406 aa16.69■□□□□ 0.26
PRKCSH-211ENST00000590098 ALOXE3Q9BYJ1 711 aa16.69■□□□□ 0.26
PRKCSH-211ENST00000590098 DPH5Q9H2P9 285 aa16.69■□□□□ 0.26
PRKCSH-211ENST00000590098 LIN28AQ9H9Z2 209 aaKnown RBP16.69■□□□□ 0.26
PRKCSH-211ENST00000590098 WHRNQ9P202 907 aa16.69■□□□□ 0.26
PRKCSH-211ENST00000590098 PTBP2Q9UKA9 531 aaKnown RBP16.69■□□□□ 0.26
PRKCSH-211ENST00000590098 CLDN16Q9Y5I7 305 aa16.69■□□□□ 0.26
PRKCSH-211ENST00000590098 SPACA6W5XKT8 324 aa16.69■□□□□ 0.26
PRKCSH-211ENST00000590098 ZNF407Q9C0G0 2248 aa16.69■□□□□ 0.26
PRKCSH-211ENST00000590098 DNAJC13O75165 2243 aa16.68■□□□□ 0.26
PRKCSH-211ENST00000590098 FAM187AA6NFU0 413 aa16.68■□□□□ 0.26
PRKCSH-211ENST00000590098 PRKNO60260 465 aaPredicted RBP16.68■□□□□ 0.26
PRKCSH-211ENST00000590098 PRAMEF4O60810 478 aa16.68■□□□□ 0.26
PRKCSH-211ENST00000590098 TBX6O95947 436 aaPredicted RBP16.68■□□□□ 0.26
PRKCSH-211ENST00000590098 KIR3DL1P43629 444 aa16.68■□□□□ 0.26
PRKCSH-211ENST00000590098 RAB10P61026 200 aa16.68■□□□□ 0.26
PRKCSH-211ENST00000590098 CHIT1Q13231 466 aa16.68■□□□□ 0.26
PRKCSH-211ENST00000590098 CMPK2Q5EBM0 449 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms