RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 TOP3AQ13472 1001 aaPredicted RBP9.89□□□□□ -0.83
VPS25-203ENST00000589520 APOFQ13790 326 aa9.89□□□□□ -0.83
VPS25-203ENST00000589520 SCARB2Q14108 478 aa9.89□□□□□ -0.83
VPS25-203ENST00000589520 GNA13Q14344 377 aa9.89□□□□□ -0.83
VPS25-203ENST00000589520 SMAD2Q15796 467 aaKnown RBP9.89□□□□□ -0.83
VPS25-203ENST00000589520 CYBRD1Q53TN4 286 aa9.89□□□□□ -0.83
VPS25-203ENST00000589520 IER5LQ5T953 404 aa9.89□□□□□ -0.83
VPS25-203ENST00000589520 SAXO2Q658L1 398 aa9.89□□□□□ -0.83
VPS25-203ENST00000589520 MRM1Q6IN84 353 aaKnown RBP9.89□□□□□ -0.83
VPS25-203ENST00000589520 TMEM214Q6NUQ4 689 aaKnown RBP9.89□□□□□ -0.83
VPS25-203ENST00000589520 ABHD17CQ6PCB6 329 aa9.89□□□□□ -0.83
VPS25-203ENST00000589520 BORAQ6PGQ7 559 aa9.89□□□□□ -0.83
VPS25-203ENST00000589520 TTC33Q6PID6 262 aaPredicted RBP9.89□□□□□ -0.83
VPS25-203ENST00000589520 TMEM64Q6YI46 380 aa9.89□□□□□ -0.83
VPS25-203ENST00000589520 TMEM26Q6ZUK4 368 aa9.89□□□□□ -0.83
VPS25-203ENST00000589520 PAQR7Q86WK9 346 aa9.89□□□□□ -0.83
VPS25-203ENST00000589520 TRIM48Q8IWZ4 208 aa9.89□□□□□ -0.83
VPS25-203ENST00000589520 ZNF655Q8N720 491 aaPredicted RBP9.89□□□□□ -0.83
VPS25-203ENST00000589520 OR4E2Q8NGC2 313 aa9.89□□□□□ -0.83
VPS25-203ENST00000589520 FAM110BQ8TC76 370 aa9.89□□□□□ -0.83
VPS25-203ENST00000589520 NT5CQ8TCD5 201 aa9.89□□□□□ -0.83
VPS25-203ENST00000589520 ADAMTS16Q8TE57 1224 aa9.89□□□□□ -0.83
VPS25-203ENST00000589520 HMGB4Q8WW32 186 aa9.89□□□□□ -0.83
VPS25-203ENST00000589520 CYGBQ8WWM9 190 aa9.89□□□□□ -0.83
VPS25-203ENST00000589520 MS4A6EQ96DS6 147 aa9.89□□□□□ -0.83
VPS25-203ENST00000589520 SHDQ96IW2 340 aa9.89□□□□□ -0.83
VPS25-203ENST00000589520 MYOCQ99972 504 aa9.89□□□□□ -0.83
VPS25-203ENST00000589520 DPH2Q9BQC3 489 aaPredicted RBP9.89□□□□□ -0.83
VPS25-203ENST00000589520 LRFN3Q9BTN0 628 aa9.89□□□□□ -0.83
VPS25-203ENST00000589520 CHRDQ9H2X0 955 aa9.89□□□□□ -0.83
VPS25-203ENST00000589520 TTYH1Q9H313 450 aaPredicted RBP9.89□□□□□ -0.83
VPS25-203ENST00000589520 XKR8Q9H6D3 395 aa9.89□□□□□ -0.83
VPS25-203ENST00000589520 EPS8L2Q9H6S3 715 aa9.89□□□□□ -0.83
VPS25-203ENST00000589520 GIMAP4Q9NUV9 329 aa9.89□□□□□ -0.83
VPS25-203ENST00000589520 SCHIP1Q9P0W5 487 aaPredicted RBP9.89□□□□□ -0.83
VPS25-203ENST00000589520 TAAR2Q9P1P5 351 aa9.89□□□□□ -0.83
VPS25-203ENST00000589520 ZNF624Q9P2J8 865 aaPredicted RBP9.89□□□□□ -0.83
VPS25-203ENST00000589520 EBF1Q9UH73 591 aa9.89□□□□□ -0.83
VPS25-203ENST00000589520 PADI2Q9Y2J8 665 aa9.89□□□□□ -0.83
VPS25-203ENST00000589520 PCDHGB3Q9Y5G1 929 aa9.89□□□□□ -0.83
VPS25-203ENST00000589520 PCDHGA4Q9Y5G9 962 aa9.89□□□□□ -0.83
VPS25-203ENST00000589520 HSPE1-MOB4S4R3N1 261 aa9.89□□□□□ -0.83
VPS25-203ENST00000589520 V9GYQ6 96 aa9.89□□□□□ -0.83
VPS25-203ENST00000589520 CACNA1GO43497 2377 aa9.88□□□□□ -0.83
VPS25-203ENST00000589520 A0A1W2PPC4 97 aa9.88□□□□□ -0.83
VPS25-203ENST00000589520 TRIM64A6NGJ6 449 aa9.88□□□□□ -0.83
VPS25-203ENST00000589520 SHISA7A6NL88 538 aa9.88□□□□□ -0.83
VPS25-203ENST00000589520 A8MVJ9 347 aa9.88□□□□□ -0.83
VPS25-203ENST00000589520 C2orf74A8MZ97 194 aa9.88□□□□□ -0.83
VPS25-203ENST00000589520 ADAMDEC1O15204 470 aa9.88□□□□□ -0.83
VPS25-203ENST00000589520 BMP10O95393 424 aa9.88□□□□□ -0.83
VPS25-203ENST00000589520 B3GALT4O96024 378 aa9.88□□□□□ -0.83
VPS25-203ENST00000589520 GBAP04062 536 aa9.88□□□□□ -0.83
VPS25-203ENST00000589520 SERPIND1P05546 499 aa9.88□□□□□ -0.83
VPS25-203ENST00000589520 SMIM18P0DKX4 95 aa9.88□□□□□ -0.83
VPS25-203ENST00000589520 HIST1H1TP22492 207 aaPredicted RBP9.88□□□□□ -0.83
VPS25-203ENST00000589520 NTSP30990 170 aa9.88□□□□□ -0.83
VPS25-203ENST00000589520 TTKP33981 857 aa9.88□□□□□ -0.83
VPS25-203ENST00000589520 BCL6P41182 706 aa9.88□□□□□ -0.83
VPS25-203ENST00000589520 SLC19A1P41440 591 aa9.88□□□□□ -0.83
VPS25-203ENST00000589520 DSTNP60981 165 aa9.88□□□□□ -0.83
VPS25-203ENST00000589520 GAB1Q13480 694 aa9.88□□□□□ -0.83
VPS25-203ENST00000589520 SPIDRQ14159 915 aa9.88□□□□□ -0.83
VPS25-203ENST00000589520 NKG7Q16617 165 aa9.88□□□□□ -0.83
VPS25-203ENST00000589520 SLC5A12Q1EHB4 618 aa9.88□□□□□ -0.83
VPS25-203ENST00000589520 MPEG1Q2M385 716 aa9.88□□□□□ -0.83
VPS25-203ENST00000589520 ALG11Q2TAA5 492 aa9.88□□□□□ -0.83
VPS25-203ENST00000589520 IFI44LQ53G44 452 aa9.88□□□□□ -0.83
VPS25-203ENST00000589520 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.88□□□□□ -0.83
VPS25-203ENST00000589520 OTUD3Q5T2D3 398 aaPredicted RBP9.88□□□□□ -0.83
VPS25-203ENST00000589520 ANGPTL8Q6UXH0 198 aa9.88□□□□□ -0.83
VPS25-203ENST00000589520 RD3Q7Z3Z2 195 aa9.88□□□□□ -0.83
VPS25-203ENST00000589520 UBE3DQ7Z6J8 389 aa9.88□□□□□ -0.83
VPS25-203ENST00000589520 ASPGQ86U10 573 aa9.88□□□□□ -0.83
VPS25-203ENST00000589520 ARMC8Q8IUR7 673 aa9.88□□□□□ -0.83
VPS25-203ENST00000589520 ALDH16A1Q8IZ83 802 aa9.88□□□□□ -0.83
VPS25-203ENST00000589520 ADGRF3Q8IZF5 1079 aa9.88□□□□□ -0.83
VPS25-203ENST00000589520 GJD3Q8N144 294 aa9.88□□□□□ -0.83
VPS25-203ENST00000589520 C10orf111Q8N326 155 aa9.88□□□□□ -0.83
VPS25-203ENST00000589520 FAM86B1Q8N7N1 296 aa9.88□□□□□ -0.83
VPS25-203ENST00000589520 ARL10Q8N8L6 244 aa9.88□□□□□ -0.83
VPS25-203ENST00000589520 CAMKVQ8NCB2 501 aa9.88□□□□□ -0.83
VPS25-203ENST00000589520 TSTD1Q8NFU3 115 aa9.88□□□□□ -0.83
VPS25-203ENST00000589520 SFXN5Q8TD22 340 aa9.88□□□□□ -0.83
VPS25-203ENST00000589520 RSC1A1Q92681 617 aa9.88□□□□□ -0.83
VPS25-203ENST00000589520 TSACCQ96A04 125 aaPredicted RBP9.88□□□□□ -0.83
VPS25-203ENST00000589520 GAL3ST3Q96A11 431 aa9.88□□□□□ -0.83
VPS25-203ENST00000589520 CIDECQ96AQ7 238 aaPredicted RBP9.88□□□□□ -0.83
VPS25-203ENST00000589520 DGCR14Q96DF8 476 aaKnown RBP9.88□□□□□ -0.83
VPS25-203ENST00000589520 PDXPQ96GD0 296 aa9.88□□□□□ -0.83
VPS25-203ENST00000589520 TOE1Q96GM8 510 aaKnown RBP9.88□□□□□ -0.83
VPS25-203ENST00000589520 HSH2DQ96JZ2 352 aa9.88□□□□□ -0.83
VPS25-203ENST00000589520 NECAB3Q96P71 396 aaPredicted RBP9.88□□□□□ -0.83
VPS25-203ENST00000589520 TMEM168Q9H0V1 697 aa9.88□□□□□ -0.83
VPS25-203ENST00000589520 CAAP1Q9H8G2 361 aa9.88□□□□□ -0.83
VPS25-203ENST00000589520 REEP1Q9H902 201 aa9.88□□□□□ -0.83
VPS25-203ENST00000589520 SLC6A20Q9NP91 592 aa9.88□□□□□ -0.83
VPS25-203ENST00000589520 A4GALTQ9NPC4 353 aa9.88□□□□□ -0.83
VPS25-203ENST00000589520 LHX9Q9NQ69 397 aa9.88□□□□□ -0.83
VPS25-203ENST00000589520 SLC35C2Q9NQQ7 365 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms