RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 BRINP2Q9C0B6 783 aa16.05■□□□□ 0.16
SCAMP4-211ENST00000588907 C14orf105Q9NVL8 296 aa16.05■□□□□ 0.16
SCAMP4-211ENST00000588907 ZNF282Q9UDV7 671 aaPredicted RBP16.05■□□□□ 0.16
SCAMP4-211ENST00000588907 NXT1Q9UKK6 140 aaKnown RBP16.05■□□□□ 0.16
SCAMP4-211ENST00000588907 ARL2BPQ9Y2Y0 163 aa16.05■□□□□ 0.16
SCAMP4-211ENST00000588907 E9PBE3 544 aa16.04■□□□□ 0.16
SCAMP4-211ENST00000588907 KLHL41O60662 606 aa16.04■□□□□ 0.16
SCAMP4-211ENST00000588907 NR2F6P10588 404 aa16.04■□□□□ 0.16
SCAMP4-211ENST00000588907 DRD2P14416 443 aa16.04■□□□□ 0.16
SCAMP4-211ENST00000588907 SDC1P18827 310 aa16.04■□□□□ 0.16
SCAMP4-211ENST00000588907 PRPS1L1P21108 318 aa16.04■□□□□ 0.16
SCAMP4-211ENST00000588907 PPP2R1BP30154 601 aa16.04■□□□□ 0.16
SCAMP4-211ENST00000588907 SLC5A2P31639 672 aa16.04■□□□□ 0.16
SCAMP4-211ENST00000588907 LIM2P55344 173 aa16.04■□□□□ 0.16
SCAMP4-211ENST00000588907 C21orf58P58505 322 aa16.04■□□□□ 0.16
SCAMP4-211ENST00000588907 TNFRSF17Q02223 184 aa16.04■□□□□ 0.16
SCAMP4-211ENST00000588907 CAMK2BQ13554 666 aa16.04■□□□□ 0.16
SCAMP4-211ENST00000588907 C1orf189Q5VU69 101 aa16.04■□□□□ 0.16
SCAMP4-211ENST00000588907 ZNF517Q6ZMY9 492 aaPredicted RBP16.04■□□□□ 0.16
SCAMP4-211ENST00000588907 R3HCC1LQ7Z5L2 792 aaKnown RBP16.04■□□□□ 0.16
SCAMP4-211ENST00000588907 CA13Q8N1Q1 262 aa16.04■□□□□ 0.16
SCAMP4-211ENST00000588907 LIX1Q8N485 282 aa16.04■□□□□ 0.16
SCAMP4-211ENST00000588907 EFCAB3Q8N7B9 438 aa16.04■□□□□ 0.16
SCAMP4-211ENST00000588907 AMER3Q8N944 861 aa16.04■□□□□ 0.16
SCAMP4-211ENST00000588907 SLC38A9Q8NBW4 561 aa16.04■□□□□ 0.16
SCAMP4-211ENST00000588907 BCAS4Q8TDM0 211 aa16.04■□□□□ 0.16
SCAMP4-211ENST00000588907 ZNF764Q96H86 408 aaPredicted RBP16.04■□□□□ 0.16
SCAMP4-211ENST00000588907 ZNF578Q96N58 590 aaPredicted RBP16.04■□□□□ 0.16
SCAMP4-211ENST00000588907 C1orf50Q9BV19 199 aa16.04■□□□□ 0.16
SCAMP4-211ENST00000588907 SORBS1Q9BX66 1292 aaKnown RBP16.04■□□□□ 0.16
SCAMP4-211ENST00000588907 EBPLQ9BY08 206 aa16.04■□□□□ 0.16
SCAMP4-211ENST00000588907 TGIF2Q9GZN2 237 aa16.04■□□□□ 0.16
SCAMP4-211ENST00000588907 SLC26A1Q9H2B4 701 aa16.04■□□□□ 0.16
SCAMP4-211ENST00000588907 WDR54Q9H977 334 aa16.04■□□□□ 0.16
SCAMP4-211ENST00000588907 AIG1Q9NVV5 245 aa16.04■□□□□ 0.16
SCAMP4-211ENST00000588907 EHD3Q9NZN3 535 aa16.04■□□□□ 0.16
SCAMP4-211ENST00000588907 IFT80Q9P2H3 777 aaPredicted RBP16.04■□□□□ 0.16
SCAMP4-211ENST00000588907 GPN3Q9UHW5 284 aaPredicted RBP16.04■□□□□ 0.16
SCAMP4-211ENST00000588907 PADI1Q9ULC6 663 aa16.04■□□□□ 0.16
SCAMP4-211ENST00000588907 ASB4Q9Y574 426 aa16.04■□□□□ 0.16
SCAMP4-211ENST00000588907 SEC16AO15027 2179 aa16.03■□□□□ 0.16
SCAMP4-211ENST00000588907 IGLV3-12A0A075B6K2 115 aa16.03■□□□□ 0.16
SCAMP4-211ENST00000588907 C1orf226A1L170 272 aa16.03■□□□□ 0.16
SCAMP4-211ENST00000588907 ZNF860A6NHJ4 632 aa16.03■□□□□ 0.16
SCAMP4-211ENST00000588907 CHST10O43529 356 aa16.03■□□□□ 0.16
SCAMP4-211ENST00000588907 TMPRSS11DO60235 418 aa16.03■□□□□ 0.16
SCAMP4-211ENST00000588907 CCDC22O60826 627 aa16.03■□□□□ 0.16
SCAMP4-211ENST00000588907 ZNF28P17035 718 aa16.03■□□□□ 0.16
SCAMP4-211ENST00000588907 CPN2P22792 545 aa16.03■□□□□ 0.16
SCAMP4-211ENST00000588907 HPCAL1P37235 193 aa16.03■□□□□ 0.16
SCAMP4-211ENST00000588907 CLNS1AP54105 237 aaKnown RBP16.03■□□□□ 0.16
SCAMP4-211ENST00000588907 OCA2Q04671 838 aa16.03■□□□□ 0.16
SCAMP4-211ENST00000588907 KLC1Q07866 573 aa16.03■□□□□ 0.16
SCAMP4-211ENST00000588907 SQLEQ14534 574 aa16.03■□□□□ 0.16
SCAMP4-211ENST00000588907 DPY19L1Q2PZI1 675 aa16.03■□□□□ 0.16
SCAMP4-211ENST00000588907 PDCD4Q53EL6 469 aaKnown RBP16.03■□□□□ 0.16
SCAMP4-211ENST00000588907 SAMD14Q8IZD0 417 aaPredicted RBP16.03■□□□□ 0.16
SCAMP4-211ENST00000588907 NLGN4XQ8N0W4 816 aa16.03■□□□□ 0.16
SCAMP4-211ENST00000588907 MIER2Q8N344 545 aa16.03■□□□□ 0.16
SCAMP4-211ENST00000588907 GLB1L3Q8NCI6 653 aaPredicted RBP16.03■□□□□ 0.16
SCAMP4-211ENST00000588907 GALNT6Q8NCL4 622 aa16.03■□□□□ 0.16
SCAMP4-211ENST00000588907 NLGN4YQ8NFZ3 816 aaPredicted RBP16.03■□□□□ 0.16
SCAMP4-211ENST00000588907 OR51Q1Q8NH59 317 aa16.03■□□□□ 0.16
SCAMP4-211ENST00000588907 C16orf78Q8WTQ4 265 aa16.03■□□□□ 0.16
SCAMP4-211ENST00000588907 MR1Q95460 341 aa16.03■□□□□ 0.16
SCAMP4-211ENST00000588907 PMEPA1Q969W9 287 aa16.03■□□□□ 0.16
SCAMP4-211ENST00000588907 TBC1D20Q96BZ9 403 aa16.03■□□□□ 0.16
SCAMP4-211ENST00000588907 MTERF3Q96E29 417 aa16.03■□□□□ 0.16
SCAMP4-211ENST00000588907 ZBTB18Q99592 522 aa16.03■□□□□ 0.16
SCAMP4-211ENST00000588907 PRPF18Q99633 342 aaKnown RBP16.03■□□□□ 0.16
SCAMP4-211ENST00000588907 SPRY4Q9C004 299 aa16.03■□□□□ 0.16
SCAMP4-211ENST00000588907 ASCL3Q9NQ33 180 aa16.03■□□□□ 0.16
SCAMP4-211ENST00000588907 SDR39U1Q9NRG7 319 aaPredicted RBP16.03■□□□□ 0.16
SCAMP4-211ENST00000588907 ZIM2Q9NZV7 527 aa16.03■□□□□ 0.16
SCAMP4-211ENST00000588907 FOXJ2Q9P0K8 574 aa16.03■□□□□ 0.16
SCAMP4-211ENST00000588907 TRPC4Q9UBN4 977 aa16.03■□□□□ 0.16
SCAMP4-211ENST00000588907 GIMAP2Q9UG22 337 aa16.03■□□□□ 0.16
SCAMP4-211ENST00000588907 PSME2Q9UL46 239 aa16.03■□□□□ 0.16
SCAMP4-211ENST00000588907 DLGAP4Q9Y2H0 992 aa16.03■□□□□ 0.16
SCAMP4-211ENST00000588907 PADI2Q9Y2J8 665 aa16.03■□□□□ 0.16
SCAMP4-211ENST00000588907 MSRB2Q9Y3D2 182 aa16.03■□□□□ 0.16
SCAMP4-211ENST00000588907 AK5Q9Y6K8 562 aa16.03■□□□□ 0.16
SCAMP4-211ENST00000588907 MAU2Q9Y6X3 613 aa16.03■□□□□ 0.16
SCAMP4-211ENST00000588907 PMS2P1A4D2B8 440 aa16.02■□□□□ 0.16
SCAMP4-211ENST00000588907 CLDN4O14493 209 aa16.02■□□□□ 0.16
SCAMP4-211ENST00000588907 SLC22A2O15244 555 aa16.02■□□□□ 0.16
SCAMP4-211ENST00000588907 PROM1O43490 865 aa16.02■□□□□ 0.16
SCAMP4-211ENST00000588907 DCTN3O75935 186 aa16.02■□□□□ 0.16
SCAMP4-211ENST00000588907 GBAP04062 536 aa16.02■□□□□ 0.16
SCAMP4-211ENST00000588907 FHP07954 510 aa16.02■□□□□ 0.16
SCAMP4-211ENST00000588907 ALDOCP09972 364 aaKnown RBP16.02■□□□□ 0.16
SCAMP4-211ENST00000588907 G6PDP11413 515 aa16.02■□□□□ 0.16
SCAMP4-211ENST00000588907 ITGAXP20702 1163 aa16.02■□□□□ 0.16
SCAMP4-211ENST00000588907 DDCP20711 480 aa16.02■□□□□ 0.16
SCAMP4-211ENST00000588907 ADSLP30566 484 aaPredicted RBP16.02■□□□□ 0.16
SCAMP4-211ENST00000588907 OR1D4P47884 311 aa16.02■□□□□ 0.16
SCAMP4-211ENST00000588907 CLDN8P56748 225 aa16.02■□□□□ 0.16
SCAMP4-211ENST00000588907 TAS2R50P59544 299 aa16.02■□□□□ 0.16
SCAMP4-211ENST00000588907 BIKQ13323 160 aa16.02■□□□□ 0.16
SCAMP4-211ENST00000588907 RUNX2Q13950 521 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms