RNA–Protein interactions for RNA: ENST00000588901.5

ATP6V0A1-220, Transcript of ATPase H+ transporting V0 subunit a1, humanhuman

TSL 2

Gene ATP6V0A1, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1-220ENST00000588901 CYP4X1Q8N118 509 aa16.81■□□□□ 0.28
ATP6V0A1-220ENST00000588901 LGI4Q8N135 537 aa16.81■□□□□ 0.28
ATP6V0A1-220ENST00000588901 BEST3Q8N1M1 668 aa16.81■□□□□ 0.28
ATP6V0A1-220ENST00000588901 RNF175Q8N4F7 328 aa16.81■□□□□ 0.28
ATP6V0A1-220ENST00000588901 KIF2BQ8N4N8 673 aa16.81■□□□□ 0.28
ATP6V0A1-220ENST00000588901 SLC5A8Q8N695 610 aa16.81■□□□□ 0.28
ATP6V0A1-220ENST00000588901 ACOT4Q8N9L9 421 aa16.81■□□□□ 0.28
ATP6V0A1-220ENST00000588901 L3MBTL4Q8NA19 623 aa16.81■□□□□ 0.28
ATP6V0A1-220ENST00000588901 GRHL3Q8TE85 626 aa16.81■□□□□ 0.28
ATP6V0A1-220ENST00000588901 MTBPQ96DY7 904 aa16.81■□□□□ 0.28
ATP6V0A1-220ENST00000588901 SCYL1Q96KG9 808 aa16.81■□□□□ 0.28
ATP6V0A1-220ENST00000588901 MRPL57Q9BQC6 102 aaKnown RBP16.81■□□□□ 0.28
ATP6V0A1-220ENST00000588901 MRPL46Q9H2W6 279 aaKnown RBP16.81■□□□□ 0.28
ATP6V0A1-220ENST00000588901 PRTFDC1Q9NRG1 225 aa16.81■□□□□ 0.28
ATP6V0A1-220ENST00000588901 AGPAT4Q9NRZ5 378 aa16.81■□□□□ 0.28
ATP6V0A1-220ENST00000588901 FETUBQ9UGM5 382 aa16.81■□□□□ 0.28
ATP6V0A1-220ENST00000588901 PCTPQ9UKL6 214 aa16.81■□□□□ 0.28
ATP6V0A1-220ENST00000588901 MRPS33Q9Y291 106 aaKnown RBP16.81■□□□□ 0.28
ATP6V0A1-220ENST00000588901 SCN2AQ99250 2005 aa16.8■□□□□ 0.28
ATP6V0A1-220ENST00000588901 RTCAO00442 366 aaKnown RBP16.8■□□□□ 0.28
ATP6V0A1-220ENST00000588901 CLDN4O14493 209 aa16.8■□□□□ 0.28
ATP6V0A1-220ENST00000588901 OR7A17O14581 309 aa16.8■□□□□ 0.28
ATP6V0A1-220ENST00000588901 MAN1A2O60476 641 aa16.8■□□□□ 0.28
ATP6V0A1-220ENST00000588901 SMIM24O75264 130 aa16.8■□□□□ 0.28
ATP6V0A1-220ENST00000588901 SBK3P0C264 359 aa16.8■□□□□ 0.28
ATP6V0A1-220ENST00000588901 MYBL2P10244 700 aa16.8■□□□□ 0.28
ATP6V0A1-220ENST00000588901 TAS2R50P59544 299 aa16.8■□□□□ 0.28
ATP6V0A1-220ENST00000588901 SLC13A2Q13183 592 aa16.8■□□□□ 0.28
ATP6V0A1-220ENST00000588901 DDX39BQ13838 428 aaKnown RBP16.8■□□□□ 0.28
ATP6V0A1-220ENST00000588901 RCN2Q14257 317 aa16.8■□□□□ 0.28
ATP6V0A1-220ENST00000588901 SLC29A2Q14542 456 aa16.8■□□□□ 0.28
ATP6V0A1-220ENST00000588901 MEP1AQ16819 746 aa16.8■□□□□ 0.28
ATP6V0A1-220ENST00000588901 DEPDC1Q5TB30 811 aa16.8■□□□□ 0.28
ATP6V0A1-220ENST00000588901 LGSNQ5TDP6 509 aa16.8■□□□□ 0.28
ATP6V0A1-220ENST00000588901 TMEM151AQ8N4L1 468 aa16.8■□□□□ 0.28
ATP6V0A1-220ENST00000588901 PHF21BQ96EK2 531 aa16.8■□□□□ 0.28
ATP6V0A1-220ENST00000588901 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.8■□□□□ 0.28
ATP6V0A1-220ENST00000588901 OR51B5Q9H339 312 aa16.8■□□□□ 0.28
ATP6V0A1-220ENST00000588901 PPIEQ9UNP9 301 aaKnown RBP16.8■□□□□ 0.28
ATP6V0A1-220ENST00000588901 SYNDIG1LA6NDD5 238 aa16.79■□□□□ 0.28
ATP6V0A1-220ENST00000588901 SAP18O00422 153 aaKnown RBP16.79■□□□□ 0.28
ATP6V0A1-220ENST00000588901 PRAMEF2O60811 474 aa16.79■□□□□ 0.28
ATP6V0A1-220ENST00000588901 SH3BGRLO75368 114 aa16.79■□□□□ 0.28
ATP6V0A1-220ENST00000588901 PPP2R1BP30154 601 aa16.79■□□□□ 0.28
ATP6V0A1-220ENST00000588901 SSR2P43308 183 aa16.79■□□□□ 0.28
ATP6V0A1-220ENST00000588901 TUBA3CQ13748 450 aa16.79■□□□□ 0.28
ATP6V0A1-220ENST00000588901 CPSF6Q16630 551 aaKnown RBP eCLIP16.79■□□□□ 0.28
ATP6V0A1-220ENST00000588901 TUBA3EQ6PEY2 450 aa16.79■□□□□ 0.28
ATP6V0A1-220ENST00000588901 FAM180AQ6UWF9 173 aa16.79■□□□□ 0.28
ATP6V0A1-220ENST00000588901 ARMC10Q8N2F6 343 aa16.79■□□□□ 0.28
ATP6V0A1-220ENST00000588901 APCDD1LQ8NCL9 501 aa16.79■□□□□ 0.28
ATP6V0A1-220ENST00000588901 OR52B6Q8NGF0 335 aa16.79■□□□□ 0.28
ATP6V0A1-220ENST00000588901 WDR20Q8TBZ3 569 aa16.79■□□□□ 0.28
ATP6V0A1-220ENST00000588901 FAR1Q8WVX9 515 aa16.79■□□□□ 0.28
ATP6V0A1-220ENST00000588901 REPS1Q96D71 796 aa16.79■□□□□ 0.28
ATP6V0A1-220ENST00000588901 TAAR6Q96RI8 345 aa16.79■□□□□ 0.28
ATP6V0A1-220ENST00000588901 MTERF1Q99551 399 aaKnown RBP16.79■□□□□ 0.28
ATP6V0A1-220ENST00000588901 MAPKAP1Q9BPZ7 522 aa16.79■□□□□ 0.28
ATP6V0A1-220ENST00000588901 SLX1AQ9BQ83 275 aa16.79■□□□□ 0.28
ATP6V0A1-220ENST00000588901 NOL11Q9H8H0 719 aaKnown RBP16.79■□□□□ 0.28
ATP6V0A1-220ENST00000588901 ZBTB26Q9HCK0 441 aa16.79■□□□□ 0.28
ATP6V0A1-220ENST00000588901 ABI3Q9P2A4 366 aa16.79■□□□□ 0.28
ATP6V0A1-220ENST00000588901 RNF11Q9Y3C5 154 aa16.79■□□□□ 0.28
ATP6V0A1-220ENST00000588901 ANKUB1A6NFN9 424 aa16.78■□□□□ 0.28
ATP6V0A1-220ENST00000588901 A8MUA0 341 aa16.78■□□□□ 0.28
ATP6V0A1-220ENST00000588901 PLPP1O14494 284 aa16.78■□□□□ 0.28
ATP6V0A1-220ENST00000588901 CTNSO60931 367 aa16.78■□□□□ 0.28
ATP6V0A1-220ENST00000588901 MYO1DO94832 1006 aa16.78■□□□□ 0.28
ATP6V0A1-220ENST00000588901 CLDN9O95484 217 aa16.78■□□□□ 0.28
ATP6V0A1-220ENST00000588901 RPS17P08708 135 aaKnown RBP16.78■□□□□ 0.28
ATP6V0A1-220ENST00000588901 ARFIP1P53367 373 aa16.78■□□□□ 0.28
ATP6V0A1-220ENST00000588901 RPS13P62277 151 aaKnown RBP16.78■□□□□ 0.28
ATP6V0A1-220ENST00000588901 PHEXP78562 749 aa16.78■□□□□ 0.28
ATP6V0A1-220ENST00000588901 TRAF3Q13114 568 aa16.78■□□□□ 0.28
ATP6V0A1-220ENST00000588901 ZRSR2Q15696 482 aaKnown RBP16.78■□□□□ 0.28
ATP6V0A1-220ENST00000588901 EIF2S3LQ2VIR3 472 aaKnown RBP16.78■□□□□ 0.28
ATP6V0A1-220ENST00000588901 AP5B1Q2VPB7 878 aa16.78■□□□□ 0.28
ATP6V0A1-220ENST00000588901 FHL5Q5TD97 284 aa16.78■□□□□ 0.28
ATP6V0A1-220ENST00000588901 ZNF324BQ6AW86 544 aaPredicted RBP16.78■□□□□ 0.28
ATP6V0A1-220ENST00000588901 OR4C11Q6IEV9 310 aa16.78■□□□□ 0.28
ATP6V0A1-220ENST00000588901 CLNKQ7Z7G1 428 aa16.78■□□□□ 0.28
ATP6V0A1-220ENST00000588901 LCA5Q86VQ0 697 aa16.78■□□□□ 0.28
ATP6V0A1-220ENST00000588901 BCORP1Q8N888 145 aa16.78■□□□□ 0.28
ATP6V0A1-220ENST00000588901 ST6GALNAC3Q8NDV1 305 aa16.78■□□□□ 0.28
ATP6V0A1-220ENST00000588901 MDS2Q8NDY4 140 aa16.78■□□□□ 0.28
ATP6V0A1-220ENST00000588901 B3GNT7Q8NFL0 401 aa16.78■□□□□ 0.28
ATP6V0A1-220ENST00000588901 SUN3Q8TAQ9 357 aa16.78■□□□□ 0.28
ATP6V0A1-220ENST00000588901 MZB1Q8WU39 189 aa16.78■□□□□ 0.28
ATP6V0A1-220ENST00000588901 RGMAQ96B86 450 aa16.78■□□□□ 0.28
ATP6V0A1-220ENST00000588901 NSUN5Q96P11 429 aaKnown RBP16.78■□□□□ 0.28
ATP6V0A1-220ENST00000588901 CDK15Q96Q40 435 aa16.78■□□□□ 0.28
ATP6V0A1-220ENST00000588901 NTMT1Q9BV86 223 aa16.78■□□□□ 0.28
ATP6V0A1-220ENST00000588901 SORBS1Q9BX66 1292 aaKnown RBP16.78■□□□□ 0.28
ATP6V0A1-220ENST00000588901 ZNF717Q9BY31 904 aaPredicted RBP16.78■□□□□ 0.28
ATP6V0A1-220ENST00000588901 ADAP2Q9NPF8 381 aa16.78■□□□□ 0.28
ATP6V0A1-220ENST00000588901 PSMC3IPQ9P2W1 217 aaPredicted RBP16.78■□□□□ 0.28
ATP6V0A1-220ENST00000588901 PCDHGB6Q9Y5F9 930 aa16.78■□□□□ 0.28
ATP6V0A1-220ENST00000588901 SPTAN1Q13813 2472 aaKnown RBP16.78■□□□□ 0.28
ATP6V0A1-220ENST00000588901 BLACEA4D250 179 aa16.77■□□□□ 0.28
ATP6V0A1-220ENST00000588901 GABRR3A8MPY1 467 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms