RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 UMODP07911 640 aa17.9■□□□□ 0.46
CLPTM1-209ENST00000588855 RNH1P13489 461 aaKnown RBP17.9■□□□□ 0.46
CLPTM1-209ENST00000588855 TPP2P29144 1249 aaPredicted RBP17.9■□□□□ 0.46
CLPTM1-209ENST00000588855 EFNA3P52797 238 aa17.9■□□□□ 0.46
CLPTM1-209ENST00000588855 RAB38P57729 211 aa17.9■□□□□ 0.46
CLPTM1-209ENST00000588855 SLAMF1Q13291 335 aa17.9■□□□□ 0.46
CLPTM1-209ENST00000588855 PDCD2Q16342 344 aaPredicted RBP17.9■□□□□ 0.46
CLPTM1-209ENST00000588855 SPDYAQ5MJ70 313 aa17.9■□□□□ 0.46
CLPTM1-209ENST00000588855 BROXQ5VW32 411 aa17.9■□□□□ 0.46
CLPTM1-209ENST00000588855 Q6ZSR9 355 aa17.9■□□□□ 0.46
CLPTM1-209ENST00000588855 FAM47BQ8NA70 645 aa17.9■□□□□ 0.46
CLPTM1-209ENST00000588855 CHTF18Q8WVB6 975 aa17.9■□□□□ 0.46
CLPTM1-209ENST00000588855 TBC1D20Q96BZ9 403 aa17.9■□□□□ 0.46
CLPTM1-209ENST00000588855 CSF3RQ99062 836 aa17.9■□□□□ 0.46
CLPTM1-209ENST00000588855 KCMF1Q9P0J7 381 aa17.9■□□□□ 0.46
CLPTM1-209ENST00000588855 PTPRQQ9UMZ3 2332 aa17.89■□□□□ 0.46
CLPTM1-209ENST00000588855 FAM227AF5H4B4 570 aa17.89■□□□□ 0.45
CLPTM1-209ENST00000588855 PSMD12O00232 456 aaPredicted RBP17.89■□□□□ 0.45
CLPTM1-209ENST00000588855 RGS14O43566 566 aa17.89■□□□□ 0.45
CLPTM1-209ENST00000588855 CDC123O75794 336 aaPredicted RBP17.89■□□□□ 0.45
CLPTM1-209ENST00000588855 FHP07954 510 aa17.89■□□□□ 0.45
CLPTM1-209ENST00000588855 HNRNPH2P55795 449 aaKnown RBP17.89■□□□□ 0.45
CLPTM1-209ENST00000588855 ACSM2AQ08AH3 577 aa17.89■□□□□ 0.45
CLPTM1-209ENST00000588855 XKR7Q5GH72 579 aa17.89■□□□□ 0.45
CLPTM1-209ENST00000588855 MFSD4BQ5TF39 518 aa17.89■□□□□ 0.45
CLPTM1-209ENST00000588855 ACSM2BQ68CK6 577 aa17.89■□□□□ 0.45
CLPTM1-209ENST00000588855 CYP20A1Q6UW02 462 aa17.89■□□□□ 0.45
CLPTM1-209ENST00000588855 PAGE2Q7Z2X7 111 aa17.89■□□□□ 0.45
CLPTM1-209ENST00000588855 HOMEZQ8IX15 550 aa17.89■□□□□ 0.45
CLPTM1-209ENST00000588855 EFCAB3Q8N7B9 438 aa17.89■□□□□ 0.45
CLPTM1-209ENST00000588855 MAGEB18Q96M61 343 aa17.89■□□□□ 0.45
CLPTM1-209ENST00000588855 OR1F2PQ96R84 312 aa17.89■□□□□ 0.45
CLPTM1-209ENST00000588855 CRB3Q9BUF7 120 aa17.89■□□□□ 0.45
CLPTM1-209ENST00000588855 CPNE5Q9HCH3 593 aa17.89■□□□□ 0.45
CLPTM1-209ENST00000588855 LYRM4Q9HD34 91 aa17.89■□□□□ 0.45
CLPTM1-209ENST00000588855 SLCO1B3Q9NPD5 702 aa17.89■□□□□ 0.45
CLPTM1-209ENST00000588855 LANCL2Q9NS86 450 aa17.89■□□□□ 0.45
CLPTM1-209ENST00000588855 MARCOQ9UEW3 520 aaPredicted RBP17.89■□□□□ 0.45
CLPTM1-209ENST00000588855 ADAM29Q9UKF5 820 aa17.89■□□□□ 0.45
CLPTM1-209ENST00000588855 FBXW2Q9UKT8 454 aa17.89■□□□□ 0.45
CLPTM1-209ENST00000588855 PCSK5Q92824 1860 aa17.89■□□□□ 0.45
CLPTM1-209ENST00000588855 OR2W5A6NFC9 320 aa17.88■□□□□ 0.45
CLPTM1-209ENST00000588855 SRRM3A6NNA2 597 aaPredicted RBP17.88■□□□□ 0.45
CLPTM1-209ENST00000588855 RAE1P78406 368 aaKnown RBP17.88■□□□□ 0.45
CLPTM1-209ENST00000588855 NR6A1Q15406 480 aa17.88■□□□□ 0.45
CLPTM1-209ENST00000588855 MINDY4Q4G0A6 757 aa17.88■□□□□ 0.45
CLPTM1-209ENST00000588855 SPIN4Q56A73 249 aa17.88■□□□□ 0.45
CLPTM1-209ENST00000588855 ATP1A1-AS1Q5TC04 95 aa17.88■□□□□ 0.45
CLPTM1-209ENST00000588855 MRM1Q6IN84 353 aaKnown RBP17.88■□□□□ 0.45
CLPTM1-209ENST00000588855 CCDC81Q6ZN84 652 aa17.88■□□□□ 0.45
CLPTM1-209ENST00000588855 KIRREL3Q8IZU9 778 aa17.88■□□□□ 0.45
CLPTM1-209ENST00000588855 TMEM52Q8NDY8 209 aa17.88■□□□□ 0.45
CLPTM1-209ENST00000588855 C19orf60Q96EN9 201 aa17.88■□□□□ 0.45
CLPTM1-209ENST00000588855 C3orf30Q96M34 536 aa17.88■□□□□ 0.45
CLPTM1-209ENST00000588855 GIMAP2Q9UG22 337 aa17.88■□□□□ 0.45
CLPTM1-209ENST00000588855 C3orf18Q9UK00 162 aa17.88■□□□□ 0.45
CLPTM1-209ENST00000588855 MKL2Q9ULH7 1088 aa17.88■□□□□ 0.45
CLPTM1-209ENST00000588855 ATP6AP2A0A1C7CYW4 349 aa17.88■□□□□ 0.45
CLPTM1-209ENST00000588855 ARHGAP10A1A4S6 786 aa17.88■□□□□ 0.45
CLPTM1-209ENST00000588855 IDSB3KWA1 339 aa17.88■□□□□ 0.45
CLPTM1-209ENST00000588855 NPIPB8E9PQR5 432 aa17.88■□□□□ 0.45
CLPTM1-209ENST00000588855 NKX2-8O15522 239 aa17.88■□□□□ 0.45
CLPTM1-209ENST00000588855 PCDH7O60245 1069 aa17.88■□□□□ 0.45
CLPTM1-209ENST00000588855 B4GALT2O60909 372 aa17.88■□□□□ 0.45
CLPTM1-209ENST00000588855 ATP6AP2O75787 350 aa17.88■□□□□ 0.45
CLPTM1-209ENST00000588855 HEXBP07686 556 aa17.88■□□□□ 0.45
CLPTM1-209ENST00000588855 FAM58BPP0C7Q3 252 aa17.88■□□□□ 0.45
CLPTM1-209ENST00000588855 PRKAR1AP10644 381 aa17.88■□□□□ 0.45
CLPTM1-209ENST00000588855 KITP10721 976 aa17.88■□□□□ 0.45
CLPTM1-209ENST00000588855 IL10P22301 178 aa17.88■□□□□ 0.45
CLPTM1-209ENST00000588855 PRPH2P23942 346 aa17.88■□□□□ 0.45
CLPTM1-209ENST00000588855 HNRNPFP52597 415 aaKnown RBP17.88■□□□□ 0.45
CLPTM1-209ENST00000588855 CCNYL2Q5T2Q4 361 aa17.88■□□□□ 0.45
CLPTM1-209ENST00000588855 ADAMTS18Q8TE60 1221 aa17.88■□□□□ 0.45
CLPTM1-209ENST00000588855 C11orf24Q96F05 449 aaPredicted RBP17.88■□□□□ 0.45
CLPTM1-209ENST00000588855 PPP1R36Q96LQ0 422 aa17.88■□□□□ 0.45
CLPTM1-209ENST00000588855 EBPLQ9BY08 206 aa17.88■□□□□ 0.45
CLPTM1-209ENST00000588855 VN1R1Q9GZP7 353 aa17.88■□□□□ 0.45
CLPTM1-209ENST00000588855 LYARQ9NX58 379 aaKnown RBP17.88■□□□□ 0.45
CLPTM1-209ENST00000588855 ATG4BQ9Y4P1 393 aa17.88■□□□□ 0.45
CLPTM1-209ENST00000588855 ASB4Q9Y574 426 aa17.88■□□□□ 0.45
CLPTM1-209ENST00000588855 MGAQ8IWI9 3026 aa17.87■□□□□ 0.45
CLPTM1-209ENST00000588855 ZNF891A8MT65 544 aaPredicted RBP17.87■□□□□ 0.45
CLPTM1-209ENST00000588855 CYR61O00622 381 aa17.87■□□□□ 0.45
CLPTM1-209ENST00000588855 LSM1O15116 133 aaKnown RBP17.87■□□□□ 0.45
CLPTM1-209ENST00000588855 RECKO95980 971 aa17.87■□□□□ 0.45
CLPTM1-209ENST00000588855 FURINP09958 794 aa17.87■□□□□ 0.45
CLPTM1-209ENST00000588855 CPN2P22792 545 aa17.87■□□□□ 0.45
CLPTM1-209ENST00000588855 TIA1P31483 386 aaKnown RBP eCLIP17.87■□□□□ 0.45
CLPTM1-209ENST00000588855 OTX2P32243 289 aa17.87■□□□□ 0.45
CLPTM1-209ENST00000588855 TMPRSS3P57727 454 aa17.87■□□□□ 0.45
CLPTM1-209ENST00000588855 TUBB8Q3ZCM7 444 aa17.87■□□□□ 0.45
CLPTM1-209ENST00000588855 FAAH2Q6GMR7 532 aa17.87■□□□□ 0.45
CLPTM1-209ENST00000588855 GPR180Q86V85 440 aa17.87■□□□□ 0.45
CLPTM1-209ENST00000588855 FAM76AQ8TAV0 307 aa17.87■□□□□ 0.45
CLPTM1-209ENST00000588855 ADAMTS17Q8TE56 1095 aa17.87■□□□□ 0.45
CLPTM1-209ENST00000588855 C7orf26Q96N11 449 aa17.87■□□□□ 0.45
CLPTM1-209ENST00000588855 MESP1Q9BRJ9 268 aa17.87■□□□□ 0.45
CLPTM1-209ENST00000588855 NUF2Q9BZD4 464 aa17.87■□□□□ 0.45
CLPTM1-209ENST00000588855 LRTM1Q9HBL6 345 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms