RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 ARPINQ7Z6K5 226 aa24.68■■□□□ 1.54
SCAMP4-210ENST00000588555 FAM47BQ8NA70 645 aa24.68■■□□□ 1.54
SCAMP4-210ENST00000588555 NUDT22Q9BRQ3 303 aa24.68■■□□□ 1.54
SCAMP4-210ENST00000588555 STARD5Q9NSY2 213 aa24.68■■□□□ 1.54
SCAMP4-210ENST00000588555 SOHLH2Q9NX45 425 aa24.68■■□□□ 1.54
SCAMP4-210ENST00000588555 SLC22A7Q9Y694 548 aa24.68■■□□□ 1.54
SCAMP4-210ENST00000588555 A0A1W2PR48 441 aa24.67■■□□□ 1.54
SCAMP4-210ENST00000588555 LNP1A1A4G5 178 aa24.67■■□□□ 1.54
SCAMP4-210ENST00000588555 RFXANKO14593 260 aa24.67■■□□□ 1.54
SCAMP4-210ENST00000588555 CKMT1AP12532 417 aa24.67■■□□□ 1.54
SCAMP4-210ENST00000588555 EFNA1P20827 205 aaPredicted RBP24.67■■□□□ 1.54
SCAMP4-210ENST00000588555 SELPLGQ14242 412 aa24.67■■□□□ 1.54
SCAMP4-210ENST00000588555 C1orf146Q5VVC0 180 aa24.67■■□□□ 1.54
SCAMP4-210ENST00000588555 PRSS42Q7Z5A4 293 aa24.67■■□□□ 1.54
SCAMP4-210ENST00000588555 FAM156AQ8NDB6 213 aa24.67■■□□□ 1.54
SCAMP4-210ENST00000588555 OR8J3Q8NGG0 315 aa24.67■■□□□ 1.54
SCAMP4-210ENST00000588555 NAT6Q93015 286 aa24.67■■□□□ 1.54
SCAMP4-210ENST00000588555 SERINC2Q96SA4 455 aa24.67■■□□□ 1.54
SCAMP4-210ENST00000588555 GMPR2Q9P2T1 348 aaKnown RBP24.67■■□□□ 1.54
SCAMP4-210ENST00000588555 PLCL2Q9UPR0 1127 aa24.67■■□□□ 1.54
SCAMP4-210ENST00000588555 SCN3AQ9NY46 2000 aa24.67■■□□□ 1.54
SCAMP4-210ENST00000588555 DRD2P14416 443 aa24.67■■□□□ 1.54
SCAMP4-210ENST00000588555 MSX2P35548 267 aaPredicted RBP24.67■■□□□ 1.54
SCAMP4-210ENST00000588555 RUNDC3AQ59EK9 446 aa24.67■■□□□ 1.54
SCAMP4-210ENST00000588555 VPS37AQ8NEZ2 397 aa24.67■■□□□ 1.54
SCAMP4-210ENST00000588555 KLHL6Q8WZ60 621 aa24.67■■□□□ 1.54
SCAMP4-210ENST00000588555 UCN3Q969E3 161 aa24.67■■□□□ 1.54
SCAMP4-210ENST00000588555 CIDECQ96AQ7 238 aaPredicted RBP24.67■■□□□ 1.54
SCAMP4-210ENST00000588555 PANX1Q96RD7 426 aa24.67■■□□□ 1.54
SCAMP4-210ENST00000588555 NLNQ9BYT8 704 aa24.67■■□□□ 1.54
SCAMP4-210ENST00000588555 ZMYND15Q9H091 742 aa24.67■■□□□ 1.54
SCAMP4-210ENST00000588555 LYARQ9NX58 379 aaKnown RBP24.67■■□□□ 1.54
SCAMP4-210ENST00000588555 A0A1W2PQM1 296 aa24.66■■□□□ 1.54
SCAMP4-210ENST00000588555 ENTPD5O75356 428 aa24.66■■□□□ 1.54
SCAMP4-210ENST00000588555 GSNP06396 782 aa24.66■■□□□ 1.54
SCAMP4-210ENST00000588555 ALDH9A1P49189 494 aa24.66■■□□□ 1.54
SCAMP4-210ENST00000588555 MTPNP58546 118 aa24.66■■□□□ 1.54
SCAMP4-210ENST00000588555 ACTR3P61158 418 aa24.66■■□□□ 1.54
SCAMP4-210ENST00000588555 LRRC74AQ0VAA2 488 aa24.66■■□□□ 1.54
SCAMP4-210ENST00000588555 DBX2Q6ZNG2 339 aa24.66■■□□□ 1.54
SCAMP4-210ENST00000588555 PRSS41Q7RTY9 318 aa24.66■■□□□ 1.54
SCAMP4-210ENST00000588555 TMPRSS9Q7Z410 1059 aa24.66■■□□□ 1.54
SCAMP4-210ENST00000588555 PDSS2Q86YH6 399 aa24.66■■□□□ 1.54
SCAMP4-210ENST00000588555 MAPKAP1Q9BPZ7 522 aa24.66■■□□□ 1.54
SCAMP4-210ENST00000588555 IKZF5Q9H5V7 419 aa24.66■■□□□ 1.54
SCAMP4-210ENST00000588555 TAS2R7Q9NYW3 318 aa24.66■■□□□ 1.54
SCAMP4-210ENST00000588555 EHD3Q9NZN3 535 aa24.66■■□□□ 1.54
SCAMP4-210ENST00000588555 SUCOQ9UBS9 1254 aaKnown RBP24.66■■□□□ 1.54
SCAMP4-210ENST00000588555 FBXW2Q9UKT8 454 aa24.66■■□□□ 1.54
SCAMP4-210ENST00000588555 TXNDC9O14530 226 aa24.65■■□□□ 1.54
SCAMP4-210ENST00000588555 PROM1O43490 865 aa24.65■■□□□ 1.54
SCAMP4-210ENST00000588555 GUCY1B2O75343 617 aa24.65■■□□□ 1.54
SCAMP4-210ENST00000588555 HSD17B1P14061 328 aa24.65■■□□□ 1.54
SCAMP4-210ENST00000588555 TCN1P20061 433 aaPredicted RBP24.65■■□□□ 1.54
SCAMP4-210ENST00000588555 ATXN3P54252 364 aaPredicted RBP24.65■■□□□ 1.54
SCAMP4-210ENST00000588555 HSD11B2P80365 405 aa24.65■■□□□ 1.54
SCAMP4-210ENST00000588555 MS4A2Q01362 244 aa24.65■■□□□ 1.54
SCAMP4-210ENST00000588555 SPATS1Q496A3 300 aa24.65■■□□□ 1.54
SCAMP4-210ENST00000588555 FBXW10Q5XX13 1052 aa24.65■■□□□ 1.54
SCAMP4-210ENST00000588555 SLC41A2Q96JW4 573 aa24.65■■□□□ 1.54
SCAMP4-210ENST00000588555 FAIM2Q9BWQ8 316 aa24.65■■□□□ 1.54
SCAMP4-210ENST00000588555 DNAAF2Q9NVR5 837 aaKnown RBP24.65■■□□□ 1.54
SCAMP4-210ENST00000588555 KCMF1Q9P0J7 381 aa24.65■■□□□ 1.54
SCAMP4-210ENST00000588555 C5AR2Q9P296 337 aa24.65■■□□□ 1.54
SCAMP4-210ENST00000588555 L3MBTL1Q9Y468 752 aa24.65■■□□□ 1.54
SCAMP4-210ENST00000588555 PCDHGB2Q9Y5G2 931 aa24.65■■□□□ 1.54
SCAMP4-210ENST00000588555 NUP214P35658 2090 aaPredicted RBP24.65■■□□□ 1.54
SCAMP4-210ENST00000588555 PRKRAO75569 313 aaKnown RBP24.65■■□□□ 1.54
SCAMP4-210ENST00000588555 AIFM1O95831 613 aa24.65■■□□□ 1.54
SCAMP4-210ENST00000588555 IL1RNP18510 177 aa24.65■■□□□ 1.54
SCAMP4-210ENST00000588555 ZNF10P21506 573 aaPredicted RBP24.65■■□□□ 1.54
SCAMP4-210ENST00000588555 CCL7P80098 99 aa24.65■■□□□ 1.54
SCAMP4-210ENST00000588555 RIPK1Q13546 671 aa24.65■■□□□ 1.54
SCAMP4-210ENST00000588555 TMEM71Q6P5X7 295 aa24.65■■□□□ 1.54
SCAMP4-210ENST00000588555 ZNF574Q6ZN55 896 aaPredicted RBP24.65■■□□□ 1.54
SCAMP4-210ENST00000588555 GOT1L1Q8NHS2 421 aaPredicted RBP24.65■■□□□ 1.54
SCAMP4-210ENST00000588555 GBP5Q96PP8 586 aa24.65■■□□□ 1.54
SCAMP4-210ENST00000588555 PHF12Q96QT6 1004 aa24.65■■□□□ 1.54
SCAMP4-210ENST00000588555 CPPED1Q9BRF8 314 aaPredicted RBP24.65■■□□□ 1.54
SCAMP4-210ENST00000588555 NIPSNAP3AQ9UFN0 247 aaPredicted RBP24.65■■□□□ 1.54
SCAMP4-210ENST00000588555 ACOT8O14734 319 aa24.64■■□□□ 1.53
SCAMP4-210ENST00000588555 GALR3O60755 368 aaPredicted RBP24.64■■□□□ 1.53
SCAMP4-210ENST00000588555 FRKP42685 505 aaPredicted RBP24.64■■□□□ 1.53
SCAMP4-210ENST00000588555 SEPHS1P49903 392 aa24.64■■□□□ 1.53
SCAMP4-210ENST00000588555 EEFSECP57772 596 aaKnown RBP24.64■■□□□ 1.53
SCAMP4-210ENST00000588555 RUNX2Q13950 521 aa24.64■■□□□ 1.53
SCAMP4-210ENST00000588555 KCNAB1Q14722 419 aa24.64■■□□□ 1.53
SCAMP4-210ENST00000588555 SNAP47Q5SQN1 464 aa24.64■■□□□ 1.53
SCAMP4-210ENST00000588555 C6orf163Q5TEZ5 329 aa24.64■■□□□ 1.53
SCAMP4-210ENST00000588555 C18orf63Q68DL7 685 aa24.64■■□□□ 1.53
SCAMP4-210ENST00000588555 FAM180BQ6P0A1 224 aa24.64■■□□□ 1.53
SCAMP4-210ENST00000588555 C10orf67Q8IYJ2 551 aa24.64■■□□□ 1.53
SCAMP4-210ENST00000588555 D2HGDHQ8N465 521 aa24.64■■□□□ 1.53
SCAMP4-210ENST00000588555 ASB9Q96DX5 294 aa24.64■■□□□ 1.53
SCAMP4-210ENST00000588555 AURKBQ96GD4 344 aaPredicted RBP24.64■■□□□ 1.53
SCAMP4-210ENST00000588555 SLAMF7Q9NQ25 335 aa24.64■■□□□ 1.53
SCAMP4-210ENST00000588555 ENAMQ9NRM1 1142 aa24.64■■□□□ 1.53
SCAMP4-210ENST00000588555 ATXN7L1Q9ULK2 861 aaPredicted RBP24.64■■□□□ 1.53
SCAMP4-210ENST00000588555 ADAMTS20P59510 1910 aa24.64■■□□□ 1.53
SCAMP4-210ENST00000588555 B3GALT2O43825 422 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms