RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 HNF4AP41235 474 aa7.45□□□□□ -1.22
VMP1-204ENST00000587259 NUDT2P50583 147 aa7.45□□□□□ -1.22
VMP1-204ENST00000587259 PHEXP78562 749 aa7.45□□□□□ -1.22
VMP1-204ENST00000587259 SRSF11Q05519 484 aaKnown RBP7.45□□□□□ -1.22
VMP1-204ENST00000587259 PCDH1Q08174 1060 aa7.45□□□□□ -1.22
VMP1-204ENST00000587259 DMPKQ09013 629 aa7.45□□□□□ -1.22
VMP1-204ENST00000587259 ARHGAP19Q14CB8 494 aa7.45□□□□□ -1.22
VMP1-204ENST00000587259 IMPG1Q17R60 797 aa7.45□□□□□ -1.22
VMP1-204ENST00000587259 PDCD4Q53EL6 469 aaKnown RBP7.45□□□□□ -1.22
VMP1-204ENST00000587259 LIPJQ5W064 366 aa7.45□□□□□ -1.22
VMP1-204ENST00000587259 CAPN13Q6MZZ7 669 aaPredicted RBP7.45□□□□□ -1.22
VMP1-204ENST00000587259 RINLQ6ZS11 566 aa7.45□□□□□ -1.22
VMP1-204ENST00000587259 RETREG3Q86VR2 466 aa7.45□□□□□ -1.22
VMP1-204ENST00000587259 OOSP2Q86WS3 158 aa7.45□□□□□ -1.22
VMP1-204ENST00000587259 SNX32Q86XE0 403 aa7.45□□□□□ -1.22
VMP1-204ENST00000587259 DCUN1D3Q8IWE4 304 aa7.45□□□□□ -1.22
VMP1-204ENST00000587259 RBM12BQ8IXT5 1001 aaKnown RBP7.45□□□□□ -1.22
VMP1-204ENST00000587259 SYTL1Q8IYJ3 562 aa7.45□□□□□ -1.22
VMP1-204ENST00000587259 CDYL2Q8N8U2 506 aa7.45□□□□□ -1.22
VMP1-204ENST00000587259 SNX31Q8N9S9 440 aa7.45□□□□□ -1.22
VMP1-204ENST00000587259 PNPLA2Q96AD5 504 aa7.45□□□□□ -1.22
VMP1-204ENST00000587259 RAD51AP1Q96B01 352 aa7.45□□□□□ -1.22
VMP1-204ENST00000587259 PPP1R36Q96LQ0 422 aa7.45□□□□□ -1.22
VMP1-204ENST00000587259 MIPEPQ99797 713 aa7.45□□□□□ -1.22
VMP1-204ENST00000587259 CADM1Q9BY67 442 aaKnown RBP7.45□□□□□ -1.22
VMP1-204ENST00000587259 BRINP2Q9C0B6 783 aa7.45□□□□□ -1.22
VMP1-204ENST00000587259 ELOVL6Q9H5J4 265 aa7.45□□□□□ -1.22
VMP1-204ENST00000587259 DCLRE1BQ9H816 532 aa7.45□□□□□ -1.22
VMP1-204ENST00000587259 AKTIPQ9H8T0 292 aa7.45□□□□□ -1.22
VMP1-204ENST00000587259 SDR39U1Q9NRG7 319 aaPredicted RBP7.45□□□□□ -1.22
VMP1-204ENST00000587259 ASIC5Q9NY37 505 aa7.45□□□□□ -1.22
VMP1-204ENST00000587259 EIF3LQ9Y262 564 aaKnown RBP7.45□□□□□ -1.22
VMP1-204ENST00000587259 NDUFAF1Q9Y375 327 aa7.45□□□□□ -1.22
VMP1-204ENST00000587259 TMED5Q9Y3A6 229 aa7.45□□□□□ -1.22
VMP1-204ENST00000587259 MDC1Q14676 2089 aaKnown RBP7.45□□□□□ -1.22
VMP1-204ENST00000587259 C15orf38-AP3S2A0A0A6YYH1 394 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 ANKUB1A6NFN9 424 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 ARHGEF33A8MVX0 844 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 NPIPB8E9PQR5 432 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 ZNF749O43361 778 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 RSL1D1O76021 490 aaKnown RBP7.44□□□□□ -1.22
VMP1-204ENST00000587259 DDAH2O95865 285 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 KLK3P07288 261 aaPredicted RBP7.44□□□□□ -1.22
VMP1-204ENST00000587259 SLC35G4P0C7Q5 338 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 TSPAN8P19075 237 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 GNAZP19086 355 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 PRPH2P23942 346 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 CPOXP36551 454 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 PREPP48147 710 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 KCNK10P57789 538 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 EMX2Q04743 252 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 CSTF3Q12996 717 aaKnown RBP7.44□□□□□ -1.22
VMP1-204ENST00000587259 PRKG2Q13237 762 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 LAPTM5Q13571 262 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 AGKQ53H12 422 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 PAGE2BQ5JRK9 111 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 MLIPQ5VWP3 458 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 METRNLQ641Q3 311 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 ARMC6Q6NXE6 501 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 LETMD1Q6P1Q0 360 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 BNC2Q6ZN30 1099 aaPredicted RBP7.44□□□□□ -1.22
VMP1-204ENST00000587259 RPS27LQ71UM5 84 aaKnown RBP7.44□□□□□ -1.22
VMP1-204ENST00000587259 TRIM46Q7Z4K8 759 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 ARPINQ7Z6K5 226 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 MRGPREQ86SM8 312 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 FAM20CQ8IXL6 584 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 CFAP206Q8IYR0 622 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 ULK2Q8IYT8 1036 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 LMNTD1Q8N9Z9 388 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 L3MBTL4Q8NA19 623 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 FNDC5Q8NAU1 212 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 GLB1L3Q8NCI6 653 aaPredicted RBP7.44□□□□□ -1.22
VMP1-204ENST00000587259 FAM13CQ8NE31 585 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 OR52B6Q8NGF0 335 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 DNAJB8Q8NHS0 232 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 DLG3Q92796 817 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 HPS1Q92902 700 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 UBE2E3Q969T4 207 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 MOCOSQ96EN8 888 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 C5orf34Q96MH7 638 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 ANKRD27Q96NW4 1050 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 FCRL4Q96PJ5 515 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 ZBTB18Q99592 522 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 SMAD5Q99717 465 aaKnown RBP7.44□□□□□ -1.22
VMP1-204ENST00000587259 MESP1Q9BRJ9 268 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 HAUS8Q9BT25 410 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 THTPAQ9BU02 230 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 NLNQ9BYT8 704 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 SPRTNQ9H040 489 aaPredicted RBP7.44□□□□□ -1.22
VMP1-204ENST00000587259 PCBD2Q9H0N5 130 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 EHD1Q9H4M9 534 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 KIR3DX1Q9H7L2 352 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 BRF2Q9HAW0 419 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 FAM60AQ9NP50 221 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 AIG1Q9NVV5 245 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 GID8Q9NWU2 228 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 NMRK1Q9NWW6 199 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 SPATA7Q9P0W8 599 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 BAIAP2L1Q9UHR4 511 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 POMT2Q9UKY4 750 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms