RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 AP5B1Q2VPB7 878 aa16.55■□□□□ 0.24
TPM4-206ENST00000587201 TMEM35AQ53FP2 167 aa16.55■□□□□ 0.24
TPM4-206ENST00000587201 TECRLQ5HYJ1 363 aa16.55■□□□□ 0.24
TPM4-206ENST00000587201 ZNF324BQ6AW86 544 aaPredicted RBP16.55■□□□□ 0.24
TPM4-206ENST00000587201 SPINK14Q6IE38 97 aa16.55■□□□□ 0.24
TPM4-206ENST00000587201 GTF2H2CQ6P1K8 395 aa16.55■□□□□ 0.24
TPM4-206ENST00000587201 ZNF793Q6ZN11 406 aa16.55■□□□□ 0.24
TPM4-206ENST00000587201 UBE3DQ7Z6J8 389 aa16.55■□□□□ 0.24
TPM4-206ENST00000587201 CLNKQ7Z7G1 428 aa16.55■□□□□ 0.24
TPM4-206ENST00000587201 CMTM7Q96FZ5 175 aa16.55■□□□□ 0.24
TPM4-206ENST00000587201 SCYL1Q96KG9 808 aa16.55■□□□□ 0.24
TPM4-206ENST00000587201 C5orf34Q96MH7 638 aa16.55■□□□□ 0.24
TPM4-206ENST00000587201 DEFB126Q9BYW3 111 aa16.55■□□□□ 0.24
TPM4-206ENST00000587201 ACTR8Q9H981 624 aa16.55■□□□□ 0.24
TPM4-206ENST00000587201 KLHL1Q9NR64 748 aa16.55■□□□□ 0.24
TPM4-206ENST00000587201 ZNF358Q9NW07 568 aa16.55■□□□□ 0.24
TPM4-206ENST00000587201 ADGRE2Q9UHX3 823 aa16.55■□□□□ 0.24
TPM4-206ENST00000587201 NFU1Q9UMS0 254 aa16.55■□□□□ 0.24
TPM4-206ENST00000587201 OSGIN2Q9Y236 505 aa16.55■□□□□ 0.24
TPM4-206ENST00000587201 TNPO3Q9Y5L0 923 aaKnown RBP16.55■□□□□ 0.24
TPM4-206ENST00000587201 TGFBR3LH3BV60 316 aa16.54■□□□□ 0.24
TPM4-206ENST00000587201 SAP18O00422 153 aaKnown RBP16.54■□□□□ 0.24
TPM4-206ENST00000587201 CYR61O00622 381 aa16.54■□□□□ 0.24
TPM4-206ENST00000587201 RBP1P09455 135 aa16.54■□□□□ 0.24
TPM4-206ENST00000587201 CD46P15529 392 aa16.54■□□□□ 0.24
TPM4-206ENST00000587201 SSR2P43308 183 aa16.54■□□□□ 0.24
TPM4-206ENST00000587201 MAGEA12P43365 314 aa16.54■□□□□ 0.24
TPM4-206ENST00000587201 CLCN2P51788 898 aa16.54■□□□□ 0.24
TPM4-206ENST00000587201 TDGF1P3P51864 188 aa16.54■□□□□ 0.24
TPM4-206ENST00000587201 TERF2Q15554 542 aa16.54■□□□□ 0.24
TPM4-206ENST00000587201 KHDRBS2Q5VWX1 349 aaKnown RBP16.54■□□□□ 0.24
TPM4-206ENST00000587201 LIPJQ5W064 366 aa16.54■□□□□ 0.24
TPM4-206ENST00000587201 GOLGA7Q7Z5G4 137 aa16.54■□□□□ 0.24
TPM4-206ENST00000587201 IFT20Q8IY31 132 aa16.54■□□□□ 0.24
TPM4-206ENST00000587201 RNF175Q8N4F7 328 aa16.54■□□□□ 0.24
TPM4-206ENST00000587201 HORMAD2Q8N7B1 307 aa16.54■□□□□ 0.24
TPM4-206ENST00000587201 PTGR2Q8N8N7 351 aaPredicted RBP16.54■□□□□ 0.24
TPM4-206ENST00000587201 ACOT4Q8N9L9 421 aa16.54■□□□□ 0.24
TPM4-206ENST00000587201 MDS2Q8NDY4 140 aa16.54■□□□□ 0.24
TPM4-206ENST00000587201 B3GNT7Q8NFL0 401 aa16.54■□□□□ 0.24
TPM4-206ENST00000587201 DNAJB8Q8NHS0 232 aa16.54■□□□□ 0.24
TPM4-206ENST00000587201 DCAKDQ8WVC6 231 aa16.54■□□□□ 0.24
TPM4-206ENST00000587201 ISL2Q96A47 359 aa16.54■□□□□ 0.24
TPM4-206ENST00000587201 MAPKAP1Q9BPZ7 522 aa16.54■□□□□ 0.24
TPM4-206ENST00000587201 OR51B5Q9H339 312 aa16.54■□□□□ 0.24
TPM4-206ENST00000587201 LYRM4Q9HD34 91 aa16.54■□□□□ 0.24
TPM4-206ENST00000587201 LRFN1Q9P244 771 aa16.54■□□□□ 0.24
TPM4-206ENST00000587201 ZNF180Q9UJW8 692 aa16.54■□□□□ 0.24
TPM4-206ENST00000587201 PCDHGB6Q9Y5F9 930 aa16.54■□□□□ 0.24
TPM4-206ENST00000587201 PCDHGA11Q9Y5H2 935 aa16.54■□□□□ 0.24
TPM4-206ENST00000587201 SPACA6W5XKT8 324 aa16.54■□□□□ 0.24
TPM4-206ENST00000587201 TRBV11-1A0A0K0K1C0 115 aa16.53■□□□□ 0.24
TPM4-206ENST00000587201 SYNDIG1LA6NDD5 238 aa16.53■□□□□ 0.24
TPM4-206ENST00000587201 TRIM49D1C9J1S8 452 aa16.53■□□□□ 0.24
TPM4-206ENST00000587201 CTNSO60931 367 aa16.53■□□□□ 0.24
TPM4-206ENST00000587201 SIX3O95343 332 aaPredicted RBP16.53■□□□□ 0.24
TPM4-206ENST00000587201 LDLRP01130 860 aa16.53■□□□□ 0.24
TPM4-206ENST00000587201 IFNA16P05015 189 aa16.53■□□□□ 0.24
TPM4-206ENST00000587201 HIST1H1TP22492 207 aaPredicted RBP16.53■□□□□ 0.24
TPM4-206ENST00000587201 ATP5A1P25705 553 aaKnown RBP16.53■□□□□ 0.24
TPM4-206ENST00000587201 CNTFP26441 200 aa16.53■□□□□ 0.24
TPM4-206ENST00000587201 TPP2P29144 1249 aaPredicted RBP16.53■□□□□ 0.24
TPM4-206ENST00000587201 EEF1DP29692 281 aaKnown RBP16.53■□□□□ 0.24
TPM4-206ENST00000587201 PPP2R1BP30154 601 aa16.53■□□□□ 0.24
TPM4-206ENST00000587201 ARL1P40616 181 aaPredicted RBP16.53■□□□□ 0.24
TPM4-206ENST00000587201 PIK3CGP48736 1102 aa16.53■□□□□ 0.24
TPM4-206ENST00000587201 RAP1GDS1P52306 607 aa16.53■□□□□ 0.24
TPM4-206ENST00000587201 MLF1P58340 268 aa16.53■□□□□ 0.24
TPM4-206ENST00000587201 PHEXP78562 749 aa16.53■□□□□ 0.24
TPM4-206ENST00000587201 PMP22Q01453 160 aa16.53■□□□□ 0.24
TPM4-206ENST00000587201 SRSF11Q05519 484 aaKnown RBP16.53■□□□□ 0.24
TPM4-206ENST00000587201 STX4Q12846 297 aa16.53■□□□□ 0.24
TPM4-206ENST00000587201 TSNAXIP1Q2TAA8 658 aa16.53■□□□□ 0.24
TPM4-206ENST00000587201 DEPDC1Q5TB30 811 aa16.53■□□□□ 0.24
TPM4-206ENST00000587201 TMEM178AQ8NBL3 297 aa16.53■□□□□ 0.24
TPM4-206ENST00000587201 APCDD1LQ8NCL9 501 aa16.53■□□□□ 0.24
TPM4-206ENST00000587201 HUS1BQ8NHY5 278 aa16.53■□□□□ 0.24
TPM4-206ENST00000587201 ATP6V1E2Q96A05 226 aa16.53■□□□□ 0.24
TPM4-206ENST00000587201 REPS1Q96D71 796 aa16.53■□□□□ 0.24
TPM4-206ENST00000587201 PHF21BQ96EK2 531 aa16.53■□□□□ 0.24
TPM4-206ENST00000587201 MTERF1Q99551 399 aaKnown RBP16.53■□□□□ 0.24
TPM4-206ENST00000587201 CENPKQ9BS16 269 aa16.53■□□□□ 0.24
TPM4-206ENST00000587201 HES7Q9BYE0 225 aa16.53■□□□□ 0.24
TPM4-206ENST00000587201 IPPKQ9H8X2 491 aa16.53■□□□□ 0.24
TPM4-206ENST00000587201 ADAP2Q9NPF8 381 aa16.53■□□□□ 0.24
TPM4-206ENST00000587201 KCMF1Q9P0J7 381 aa16.53■□□□□ 0.24
TPM4-206ENST00000587201 XPR1Q9UBH6 696 aa16.53■□□□□ 0.24
TPM4-206ENST00000587201 PLEKHB1Q9UF11 243 aaPredicted RBP16.53■□□□□ 0.24
TPM4-206ENST00000587201 FBXW2Q9UKT8 454 aa16.53■□□□□ 0.24
TPM4-206ENST00000587201 CLDN16Q9Y5I7 305 aa16.53■□□□□ 0.24
TPM4-206ENST00000587201 HIVEP3Q5T1R4 2406 aa16.53■□□□□ 0.24
TPM4-206ENST00000587201 MYOCOSA0A1B0GUC4 107 aa16.52■□□□□ 0.24
TPM4-206ENST00000587201 EXOC1LA0A1B0GW35 172 aa16.52■□□□□ 0.24
TPM4-206ENST00000587201 A1L4Q6 167 aa16.52■□□□□ 0.24
TPM4-206ENST00000587201 CDK2AP1O14519 115 aa16.52■□□□□ 0.24
TPM4-206ENST00000587201 FCHO1O14526 889 aa16.52■□□□□ 0.24
TPM4-206ENST00000587201 UGDHO60701 494 aa16.52■□□□□ 0.24
TPM4-206ENST00000587201 SMIM24O75264 130 aa16.52■□□□□ 0.24
TPM4-206ENST00000587201 RHOXF2BP0C7M4 288 aa16.52■□□□□ 0.24
TPM4-206ENST00000587201 COL6A2P12110 1019 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms