RNA–Protein interactions for RNA: ENST00000585726.5

RETREG3-202, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 522 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-202ENST00000585726 CSF3RQ99062 836 aa20.2■□□□□ 0.82
RETREG3-202ENST00000585726 TRMOQ9BU70 441 aa20.2■□□□□ 0.82
RETREG3-202ENST00000585726 VIPAS39Q9H9C1 493 aa20.2■□□□□ 0.82
RETREG3-202ENST00000585726 BRF2Q9HAW0 419 aa20.2■□□□□ 0.82
RETREG3-202ENST00000585726 RALYQ9UKM9 306 aaKnown RBP20.2■□□□□ 0.82
RETREG3-202ENST00000585726 PPT2Q9UMR5 302 aa20.2■□□□□ 0.82
RETREG3-202ENST00000585726 IGHV3-20A0A0C4DH32 117 aa20.19■□□□□ 0.82
RETREG3-202ENST00000585726 ERVH48-1M5A8F1 160 aa20.19■□□□□ 0.82
RETREG3-202ENST00000585726 BIRC5O15392 142 aa20.19■□□□□ 0.82
RETREG3-202ENST00000585726 PRMT3O60678 531 aa20.19■□□□□ 0.82
RETREG3-202ENST00000585726 SEMA3DO95025 777 aa20.19■□□□□ 0.82
RETREG3-202ENST00000585726 KLK1P06870 262 aa20.19■□□□□ 0.82
RETREG3-202ENST00000585726 MAOAP21397 527 aa20.19■□□□□ 0.82
RETREG3-202ENST00000585726 CPN2P22792 545 aa20.19■□□□□ 0.82
RETREG3-202ENST00000585726 RRADP55042 308 aa20.19■□□□□ 0.82
RETREG3-202ENST00000585726 HMGCS1Q01581 520 aa20.19■□□□□ 0.82
RETREG3-202ENST00000585726 NSDHLQ15738 373 aa20.19■□□□□ 0.82
RETREG3-202ENST00000585726 MED25Q71SY5 747 aa20.19■□□□□ 0.82
RETREG3-202ENST00000585726 NUDT13Q86X67 352 aa20.19■□□□□ 0.82
RETREG3-202ENST00000585726 TMEM102Q8N9M5 508 aaPredicted RBP20.19■□□□□ 0.82
RETREG3-202ENST00000585726 TMEM52Q8NDY8 209 aa20.19■□□□□ 0.82
RETREG3-202ENST00000585726 AGR3Q8TD06 166 aa20.19■□□□□ 0.82
RETREG3-202ENST00000585726 NACC2Q96BF6 587 aa20.19■□□□□ 0.82
RETREG3-202ENST00000585726 VPS50Q96JG6 964 aa20.19■□□□□ 0.82
RETREG3-202ENST00000585726 ZNF717Q9BY31 904 aaPredicted RBP20.19■□□□□ 0.82
RETREG3-202ENST00000585726 EML4Q9HC35 981 aaKnown RBP20.19■□□□□ 0.82
RETREG3-202ENST00000585726 LYRM4Q9HD34 91 aa20.19■□□□□ 0.82
RETREG3-202ENST00000585726 NMRK1Q9NWW6 199 aa20.19■□□□□ 0.82
RETREG3-202ENST00000585726 NKIRAS1Q9NYS0 192 aa20.19■□□□□ 0.82
RETREG3-202ENST00000585726 KCMF1Q9P0J7 381 aa20.19■□□□□ 0.82
RETREG3-202ENST00000585726 VPS29Q9UBQ0 182 aa20.19■□□□□ 0.82
RETREG3-202ENST00000585726 SPACA6W5XKT8 324 aa20.19■□□□□ 0.82
RETREG3-202ENST00000585726 AZIN1O14977 448 aa20.18■□□□□ 0.82
RETREG3-202ENST00000585726 SASH3O75995 380 aa20.18■□□□□ 0.82
RETREG3-202ENST00000585726 SCELO95171 688 aa20.18■□□□□ 0.82
RETREG3-202ENST00000585726 DHRS4L1P0CG22 281 aa20.18■□□□□ 0.82
RETREG3-202ENST00000585726 UROSP10746 265 aa20.18■□□□□ 0.82
RETREG3-202ENST00000585726 HSD3B1P14060 373 aa20.18■□□□□ 0.82
RETREG3-202ENST00000585726 HSD3B2P26439 372 aa20.18■□□□□ 0.82
RETREG3-202ENST00000585726 TSFMP43897 325 aaKnown RBP20.18■□□□□ 0.82
RETREG3-202ENST00000585726 HNRNPFP52597 415 aaKnown RBP20.18■□□□□ 0.82
RETREG3-202ENST00000585726 BTKQ06187 659 aa20.18■□□□□ 0.82
RETREG3-202ENST00000585726 CSTF3Q12996 717 aaKnown RBP20.18■□□□□ 0.82
RETREG3-202ENST00000585726 TTMPQ5BVD1 217 aa20.18■□□□□ 0.82
RETREG3-202ENST00000585726 DCAF10Q5QP82 559 aa20.18■□□□□ 0.82
RETREG3-202ENST00000585726 TMEM205Q6UW68 189 aa20.18■□□□□ 0.82
RETREG3-202ENST00000585726 CLNKQ7Z7G1 428 aa20.18■□□□□ 0.82
RETREG3-202ENST00000585726 ZCCHC7Q8N3Z6 543 aaKnown RBP20.18■□□□□ 0.82
RETREG3-202ENST00000585726 CLEC1AQ8NC01 280 aa20.18■□□□□ 0.82
RETREG3-202ENST00000585726 ADAMTS18Q8TE60 1221 aa20.18■□□□□ 0.82
RETREG3-202ENST00000585726 ATP6V1G3Q96LB4 118 aa20.18■□□□□ 0.82
RETREG3-202ENST00000585726 UBL7Q96S82 380 aaPredicted RBP20.18■□□□□ 0.82
RETREG3-202ENST00000585726 ACPTQ9BZG2 426 aa20.18■□□□□ 0.82
RETREG3-202ENST00000585726 DDX31Q9H8H2 851 aaKnown RBP20.18■□□□□ 0.82
RETREG3-202ENST00000585726 ZNF160Q9HCG1 818 aa20.18■□□□□ 0.82
RETREG3-202ENST00000585726 PRTFDC1Q9NRG1 225 aa20.18■□□□□ 0.82
RETREG3-202ENST00000585726 MRPS33Q9Y291 106 aaKnown RBP20.18■□□□□ 0.82
RETREG3-202ENST00000585726 KMT2BQ9UMN6 2715 aaPredicted RBP20.18■□□□□ 0.82
RETREG3-202ENST00000585726 A0A0A6YYD5 115 aa20.17■□□□□ 0.82
RETREG3-202ENST00000585726 NSG1A0A0A6YYJ2 146 aa20.17■□□□□ 0.82
RETREG3-202ENST00000585726 ARHGAP10A1A4S6 786 aa20.17■□□□□ 0.82
RETREG3-202ENST00000585726 TMEM233B4DJY2 109 aa20.17■□□□□ 0.82
RETREG3-202ENST00000585726 CYR61O00622 381 aa20.17■□□□□ 0.82
RETREG3-202ENST00000585726 CLDN4O14493 209 aa20.17■□□□□ 0.82
RETREG3-202ENST00000585726 TMPRSS11DO60235 418 aa20.17■□□□□ 0.82
RETREG3-202ENST00000585726 LYPLA1O75608 230 aaPredicted RBP20.17■□□□□ 0.82
RETREG3-202ENST00000585726 BGNP21810 368 aa20.17■□□□□ 0.82
RETREG3-202ENST00000585726 ARRB2P32121 409 aa20.17■□□□□ 0.82
RETREG3-202ENST00000585726 ARFIP1P53367 373 aa20.17■□□□□ 0.82
RETREG3-202ENST00000585726 HNRNPH2P55795 449 aaKnown RBP20.17■□□□□ 0.82
RETREG3-202ENST00000585726 WDR4P57081 412 aaKnown RBP20.17■□□□□ 0.82
RETREG3-202ENST00000585726 SLC13A2Q13183 592 aa20.17■□□□□ 0.82
RETREG3-202ENST00000585726 RAPSNQ13702 412 aa20.17■□□□□ 0.82
RETREG3-202ENST00000585726 LY6DQ14210 128 aa20.17■□□□□ 0.82
RETREG3-202ENST00000585726 IMPG1Q17R60 797 aa20.17■□□□□ 0.82
RETREG3-202ENST00000585726 SPDYAQ5MJ70 313 aa20.17■□□□□ 0.82
RETREG3-202ENST00000585726 SH2D4BQ5SQS7 431 aa20.17■□□□□ 0.82
RETREG3-202ENST00000585726 CCNYL2Q5T2Q4 361 aa20.17■□□□□ 0.82
RETREG3-202ENST00000585726 CES4AQ5XG92 561 aa20.17■□□□□ 0.82
RETREG3-202ENST00000585726 QSOX2Q6ZRP7 698 aa20.17■□□□□ 0.82
RETREG3-202ENST00000585726 COMMD6Q7Z4G1 85 aa20.17■□□□□ 0.82
RETREG3-202ENST00000585726 CPEB2Q7Z5Q1 589 aaKnown RBP20.17■□□□□ 0.82
RETREG3-202ENST00000585726 ANKRD37Q7Z713 158 aa20.17■□□□□ 0.82
RETREG3-202ENST00000585726 GPR180Q86V85 440 aa20.17■□□□□ 0.82
RETREG3-202ENST00000585726 APLFQ8IW19 511 aaPredicted RBP20.17■□□□□ 0.82
RETREG3-202ENST00000585726 PARP9Q8IXQ6 854 aa20.17■□□□□ 0.82
RETREG3-202ENST00000585726 METTL4Q8N3J2 472 aa20.17■□□□□ 0.82
RETREG3-202ENST00000585726 C1orf52Q8N6N3 182 aaKnown RBP20.17■□□□□ 0.82
RETREG3-202ENST00000585726 GBP7Q8N8V2 638 aaPredicted RBP20.17■□□□□ 0.82
RETREG3-202ENST00000585726 PLPP5Q8NEB5 264 aa20.17■□□□□ 0.82
RETREG3-202ENST00000585726 ATP13A2Q9NQ11 1180 aa20.17■□□□□ 0.82
RETREG3-202ENST00000585726 NECTIN3Q9NQS3 549 aa20.17■□□□□ 0.82
RETREG3-202ENST00000585726 PRDM9Q9NQV7 894 aa20.17■□□□□ 0.82
RETREG3-202ENST00000585726 C19orf25Q9UFG5 118 aaPredicted RBP20.17■□□□□ 0.82
RETREG3-202ENST00000585726 IGHV1-45A0A0A0MS14 117 aa20.16■□□□□ 0.82
RETREG3-202ENST00000585726 MYOCOSA0A1B0GUC4 107 aa20.16■□□□□ 0.82
RETREG3-202ENST00000585726 ITM2AO43736 263 aa20.16■□□□□ 0.82
RETREG3-202ENST00000585726 PRKRAO75569 313 aaKnown RBP20.16■□□□□ 0.82
RETREG3-202ENST00000585726 SEC24DO94855 1032 aaPredicted RBP20.16■□□□□ 0.82
RETREG3-202ENST00000585726 HSPA4LO95757 839 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms