RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 NPLQ9BXD5 320 aaPredicted RBP23.4■■□□□ 1.34
TSEN54-209ENST00000583454 VN1R1Q9GZP7 353 aa23.4■■□□□ 1.34
TSEN54-209ENST00000583454 ATP13A2Q9NQ11 1180 aa23.4■■□□□ 1.34
TSEN54-209ENST00000583454 LANCL2Q9NS86 450 aa23.4■■□□□ 1.34
TSEN54-209ENST00000583454 OXSMQ9NWU1 459 aa23.4■■□□□ 1.34
TSEN54-209ENST00000583454 PPT2Q9UMR5 302 aa23.4■■□□□ 1.34
TSEN54-209ENST00000583454 PCDHGA10Q9Y5H3 936 aa23.4■■□□□ 1.34
TSEN54-209ENST00000583454 CSAG2Q9Y5P2 127 aa23.4■■□□□ 1.34
TSEN54-209ENST00000583454 MYO9AB2RTY4 2548 aa23.39■■□□□ 1.34
TSEN54-209ENST00000583454 A0A088AWK7 358 aa23.39■■□□□ 1.33
TSEN54-209ENST00000583454 A0A0G2JN53 185 aa23.39■■□□□ 1.33
TSEN54-209ENST00000583454 A0A1W2PQ72 361 aa23.39■■□□□ 1.33
TSEN54-209ENST00000583454 FOXE1O00358 373 aaPredicted RBP23.39■■□□□ 1.33
TSEN54-209ENST00000583454 TSPAN8P19075 237 aa23.39■■□□□ 1.33
TSEN54-209ENST00000583454 ZNF10P21506 573 aaPredicted RBP23.39■■□□□ 1.33
TSEN54-209ENST00000583454 PTX3P26022 381 aaPredicted RBP23.39■■□□□ 1.33
TSEN54-209ENST00000583454 ARL1P40616 181 aaPredicted RBP23.39■■□□□ 1.33
TSEN54-209ENST00000583454 DDX39BQ13838 428 aaKnown RBP23.39■■□□□ 1.33
TSEN54-209ENST00000583454 NR6A1Q15406 480 aa23.39■■□□□ 1.33
TSEN54-209ENST00000583454 C4orf17Q53FE4 359 aa23.39■■□□□ 1.33
TSEN54-209ENST00000583454 TNFAIP8L3Q5GJ75 292 aa23.39■■□□□ 1.33
TSEN54-209ENST00000583454 C10orf62Q5T681 223 aaPredicted RBP23.39■■□□□ 1.33
TSEN54-209ENST00000583454 KHDRBS2Q5VWX1 349 aaKnown RBP23.39■■□□□ 1.33
TSEN54-209ENST00000583454 FRG2Q64ET8 278 aa23.39■■□□□ 1.33
TSEN54-209ENST00000583454 LETMD1Q6P1Q0 360 aa23.39■■□□□ 1.33
TSEN54-209ENST00000583454 TMEM205Q6UW68 189 aa23.39■■□□□ 1.33
TSEN54-209ENST00000583454 CROCCP2Q86T23 111 aa23.39■■□□□ 1.33
TSEN54-209ENST00000583454 CUZD1Q86UP6 607 aa23.39■■□□□ 1.33
TSEN54-209ENST00000583454 CA13Q8N1Q1 262 aa23.39■■□□□ 1.33
TSEN54-209ENST00000583454 RNF175Q8N4F7 328 aa23.39■■□□□ 1.33
TSEN54-209ENST00000583454 MYRIPQ8NFW9 859 aa23.39■■□□□ 1.33
TSEN54-209ENST00000583454 OR11G2Q8NGC1 345 aa23.39■■□□□ 1.33
TSEN54-209ENST00000583454 KCNC2Q96PR1 638 aa23.39■■□□□ 1.33
TSEN54-209ENST00000583454 FRG2BQ96QU4 278 aa23.39■■□□□ 1.33
TSEN54-209ENST00000583454 ZNF382Q96SR6 550 aa23.39■■□□□ 1.33
TSEN54-209ENST00000583454 MESP1Q9BRJ9 268 aa23.39■■□□□ 1.33
TSEN54-209ENST00000583454 TBCDQ9BTW9 1192 aa23.39■■□□□ 1.33
TSEN54-209ENST00000583454 SENP1Q9P0U3 644 aa23.39■■□□□ 1.33
TSEN54-209ENST00000583454 MAP10Q9P2G4 905 aa23.39■■□□□ 1.33
TSEN54-209ENST00000583454 MAGEB17A8MXT2 336 aa23.38■■□□□ 1.33
TSEN54-209ENST00000583454 RGS16O15492 202 aaPredicted RBP23.38■■□□□ 1.33
TSEN54-209ENST00000583454 FHP07954 510 aa23.38■■□□□ 1.33
TSEN54-209ENST00000583454 RNH1P13489 461 aaKnown RBP23.38■■□□□ 1.33
TSEN54-209ENST00000583454 NEK2P51955 445 aa23.38■■□□□ 1.33
TSEN54-209ENST00000583454 MTTPP55157 894 aa23.38■■□□□ 1.33
TSEN54-209ENST00000583454 NAA20P61599 178 aa23.38■■□□□ 1.33
TSEN54-209ENST00000583454 AIMP2Q13155 320 aaKnown RBP23.38■■□□□ 1.33
TSEN54-209ENST00000583454 RUNX2Q13950 521 aa23.38■■□□□ 1.33
TSEN54-209ENST00000583454 CEP85LQ5SZL2 805 aa23.38■■□□□ 1.33
TSEN54-209ENST00000583454 PLPP5Q8NEB5 264 aa23.38■■□□□ 1.33
TSEN54-209ENST00000583454 VPS50Q96JG6 964 aa23.38■■□□□ 1.33
TSEN54-209ENST00000583454 SERINC2Q96SA4 455 aa23.38■■□□□ 1.33
TSEN54-209ENST00000583454 SMC6Q96SB8 1091 aa23.38■■□□□ 1.33
TSEN54-209ENST00000583454 OR51B5Q9H339 312 aa23.38■■□□□ 1.33
TSEN54-209ENST00000583454 GSTO2Q9H4Y5 243 aa23.38■■□□□ 1.33
TSEN54-209ENST00000583454 TRPS1Q9UHF7 1281 aa23.38■■□□□ 1.33
TSEN54-209ENST00000583454 MID2Q9UJV3 735 aa23.38■■□□□ 1.33
TSEN54-209ENST00000583454 LOC102723996A0A087X1L8 192 aa23.37■■□□□ 1.33
TSEN54-209ENST00000583454 WIPF3A6NGB9 483 aa23.37■■□□□ 1.33
TSEN54-209ENST00000583454 CTIFO43310 598 aaKnown RBP23.37■■□□□ 1.33
TSEN54-209ENST00000583454 B3GALT2O43825 422 aa23.37■■□□□ 1.33
TSEN54-209ENST00000583454 KLHL41O60662 606 aa23.37■■□□□ 1.33
TSEN54-209ENST00000583454 SPAG7O75391 227 aa23.37■■□□□ 1.33
TSEN54-209ENST00000583454 SCELO95171 688 aa23.37■■□□□ 1.33
TSEN54-209ENST00000583454 MLYCDO95822 493 aa23.37■■□□□ 1.33
TSEN54-209ENST00000583454 ACPPP15309 386 aa23.37■■□□□ 1.33
TSEN54-209ENST00000583454 CREB1P16220 341 aa23.37■■□□□ 1.33
TSEN54-209ENST00000583454 ARFIP1P53367 373 aa23.37■■□□□ 1.33
TSEN54-209ENST00000583454 RPS13P62277 151 aaKnown RBP23.37■■□□□ 1.33
TSEN54-209ENST00000583454 PHEXP78562 749 aa23.37■■□□□ 1.33
TSEN54-209ENST00000583454 RHAGQ02094 409 aa23.37■■□□□ 1.33
TSEN54-209ENST00000583454 LCP2Q13094 533 aa23.37■■□□□ 1.33
TSEN54-209ENST00000583454 CUL3Q13618 768 aa23.37■■□□□ 1.33
TSEN54-209ENST00000583454 TUBB8Q3ZCM7 444 aa23.37■■□□□ 1.33
TSEN54-209ENST00000583454 MINDY4Q4G0A6 757 aa23.37■■□□□ 1.33
TSEN54-209ENST00000583454 IGFL2Q6UWQ7 119 aa23.37■■□□□ 1.33
TSEN54-209ENST00000583454 CCDC63Q8NA47 563 aa23.37■■□□□ 1.33
TSEN54-209ENST00000583454 ARMC2Q8NEN0 867 aa23.37■■□□□ 1.33
TSEN54-209ENST00000583454 PRR7Q8TB68 274 aa23.37■■□□□ 1.33
TSEN54-209ENST00000583454 ROGDIQ9GZN7 287 aa23.37■■□□□ 1.33
TSEN54-209ENST00000583454 IQCGQ9H095 443 aaKnown RBP23.37■■□□□ 1.33
TSEN54-209ENST00000583454 ERRFI1Q9UJM3 462 aaPredicted RBP23.37■■□□□ 1.33
TSEN54-209ENST00000583454 STK38LQ9Y2H1 464 aa23.37■■□□□ 1.33
TSEN54-209ENST00000583454 SVILO95425 2214 aa23.37■■□□□ 1.33
TSEN54-209ENST00000583454 OR2W5A6NFC9 320 aa23.36■■□□□ 1.33
TSEN54-209ENST00000583454 TYROBPO43914 113 aa23.36■■□□□ 1.33
TSEN54-209ENST00000583454 SH3BGRLO75368 114 aa23.36■■□□□ 1.33
TSEN54-209ENST00000583454 ATP5A1P25705 553 aaKnown RBP23.36■■□□□ 1.33
TSEN54-209ENST00000583454 NAGLUP54802 743 aa23.36■■□□□ 1.33
TSEN54-209ENST00000583454 ZNF793Q6ZN11 406 aa23.36■■□□□ 1.33
TSEN54-209ENST00000583454 GPRIN3Q6ZVF9 776 aa23.36■■□□□ 1.33
TSEN54-209ENST00000583454 TCP10LQ8TDR4 215 aa23.36■■□□□ 1.33
TSEN54-209ENST00000583454 RGMAQ96B86 450 aa23.36■■□□□ 1.33
TSEN54-209ENST00000583454 C8orf44Q96CB5 159 aa23.36■■□□□ 1.33
TSEN54-209ENST00000583454 ILKAPQ9H0C8 392 aaPredicted RBP23.36■■□□□ 1.33
TSEN54-209ENST00000583454 ZGRF1Q86YA3 2104 aa23.36■■□□□ 1.33
TSEN54-209ENST00000583454 CACNA1DQ01668 2161 aa23.35■■□□□ 1.33
TSEN54-209ENST00000583454 DIDO1Q9BTC0 2240 aaKnown RBP23.35■■□□□ 1.33
TSEN54-209ENST00000583454 RTCAO00442 366 aaKnown RBP23.35■■□□□ 1.33
TSEN54-209ENST00000583454 OR4F21O95013 312 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms