RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 TERF2Q15554 542 aa7.03□□□□□ -1.28
SMARCE1-217ENST00000580654 DEFB134Q4QY38 66 aa7.03□□□□□ -1.28
SMARCE1-217ENST00000580654 CTSL3PQ5NE16 218 aa7.03□□□□□ -1.28
SMARCE1-217ENST00000580654 DCST1Q5T197 706 aa7.03□□□□□ -1.28
SMARCE1-217ENST00000580654 C6orf52Q5T4I8 152 aa7.03□□□□□ -1.28
SMARCE1-217ENST00000580654 AFTPHQ6ULP2 937 aa7.03□□□□□ -1.28
SMARCE1-217ENST00000580654 PLXDC2Q6UX71 529 aa7.03□□□□□ -1.28
SMARCE1-217ENST00000580654 DNM1P46Q6ZS02 220 aa7.03□□□□□ -1.28
SMARCE1-217ENST00000580654 C22orf34Q6ZV56 151 aa7.03□□□□□ -1.28
SMARCE1-217ENST00000580654 H2AFVQ71UI9 128 aa7.03□□□□□ -1.28
SMARCE1-217ENST00000580654 OTOAQ7RTW8 1153 aa7.03□□□□□ -1.28
SMARCE1-217ENST00000580654 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.03□□□□□ -1.28
SMARCE1-217ENST00000580654 RASGEF1CQ8N431 466 aa7.03□□□□□ -1.28
SMARCE1-217ENST00000580654 OR4L1Q8NH43 312 aa7.03□□□□□ -1.28
SMARCE1-217ENST00000580654 GSDMBQ8TAX9 411 aa7.03□□□□□ -1.28
SMARCE1-217ENST00000580654 TMEM171Q8WVE6 324 aa7.03□□□□□ -1.28
SMARCE1-217ENST00000580654 SLC13A3Q8WWT9 602 aa7.03□□□□□ -1.28
SMARCE1-217ENST00000580654 NTNG2Q96CW9 530 aa7.03□□□□□ -1.28
SMARCE1-217ENST00000580654 ZBED6CLQ96FA7 236 aaPredicted RBP7.03□□□□□ -1.28
SMARCE1-217ENST00000580654 FOPNLQ96NB1 174 aa7.03□□□□□ -1.28
SMARCE1-217ENST00000580654 TRIB1Q96RU8 372 aa7.03□□□□□ -1.28
SMARCE1-217ENST00000580654 EBNA1BP2Q99848 306 aaKnown RBP7.03□□□□□ -1.28
SMARCE1-217ENST00000580654 NUP62CLQ9H1M0 184 aa7.03□□□□□ -1.28
SMARCE1-217ENST00000580654 LRTM1Q9HBL6 345 aa7.03□□□□□ -1.28
SMARCE1-217ENST00000580654 SPTLC3Q9NUV7 552 aa7.03□□□□□ -1.28
SMARCE1-217ENST00000580654 ZNHIT6Q9NWK9 470 aaKnown RBP7.03□□□□□ -1.28
SMARCE1-217ENST00000580654 KLHL28Q9NXS3 571 aa7.03□□□□□ -1.28
SMARCE1-217ENST00000580654 GALPQ9UBC7 116 aa7.03□□□□□ -1.28
SMARCE1-217ENST00000580654 NDRG3Q9UGV2 375 aa7.03□□□□□ -1.28
SMARCE1-217ENST00000580654 CDC42EP3Q9UKI2 254 aa7.03□□□□□ -1.28
SMARCE1-217ENST00000580654 BZW2Q9Y6E2 419 aaKnown RBP7.03□□□□□ -1.28
SMARCE1-217ENST00000580654 C15orf38-AP3S2A0A0A6YYH1 394 aa7.02□□□□□ -1.29
SMARCE1-217ENST00000580654 A8MXE2 369 aa7.02□□□□□ -1.29
SMARCE1-217ENST00000580654 ERN1O75460 977 aaKnown RBP7.02□□□□□ -1.29
SMARCE1-217ENST00000580654 METTL18O95568 372 aa7.02□□□□□ -1.29
SMARCE1-217ENST00000580654 P04436 131 aa7.02□□□□□ -1.29
SMARCE1-217ENST00000580654 TMIGD3P0DMS9 266 aaPredicted RBP7.02□□□□□ -1.29
SMARCE1-217ENST00000580654 ALOX12P18054 663 aa7.02□□□□□ -1.29
SMARCE1-217ENST00000580654 CCKARP32238 428 aa7.02□□□□□ -1.29
SMARCE1-217ENST00000580654 CPA2P48052 419 aa7.02□□□□□ -1.29
SMARCE1-217ENST00000580654 FAM27E3Q08E93 113 aa7.02□□□□□ -1.29
SMARCE1-217ENST00000580654 HERC3Q15034 1050 aa7.02□□□□□ -1.29
SMARCE1-217ENST00000580654 ACSBG2Q5FVE4 666 aa7.02□□□□□ -1.29
SMARCE1-217ENST00000580654 UBAP2Q5T6F2 1119 aaKnown RBP7.02□□□□□ -1.29
SMARCE1-217ENST00000580654 TSTD2Q5T7W7 516 aa7.02□□□□□ -1.29
SMARCE1-217ENST00000580654 PTRHD1Q6GMV3 140 aaKnown RBP7.02□□□□□ -1.29
SMARCE1-217ENST00000580654 CAPN13Q6MZZ7 669 aaPredicted RBP7.02□□□□□ -1.29
SMARCE1-217ENST00000580654 SCUBE1Q8IWY4 988 aa7.02□□□□□ -1.29
SMARCE1-217ENST00000580654 ZNF321PQ8N8H1 164 aa7.02□□□□□ -1.29
SMARCE1-217ENST00000580654 SLC35G2Q8TBE7 412 aa7.02□□□□□ -1.29
SMARCE1-217ENST00000580654 SLC44A1Q8WWI5 657 aa7.02□□□□□ -1.29
SMARCE1-217ENST00000580654 FAM136AQ96C01 138 aa7.02□□□□□ -1.29
SMARCE1-217ENST00000580654 WDYHV1Q96HA8 205 aa7.02□□□□□ -1.29
SMARCE1-217ENST00000580654 SGCZQ96LD1 299 aa7.02□□□□□ -1.29
SMARCE1-217ENST00000580654 ALS2CR12Q96Q35 445 aa7.02□□□□□ -1.29
SMARCE1-217ENST00000580654 PANX3Q96QZ0 392 aa7.02□□□□□ -1.29
SMARCE1-217ENST00000580654 TTC1Q99614 292 aa7.02□□□□□ -1.29
SMARCE1-217ENST00000580654 FAM118BQ9BPY3 351 aa7.02□□□□□ -1.29
SMARCE1-217ENST00000580654 CCDC77Q9BR77 488 aa7.02□□□□□ -1.29
SMARCE1-217ENST00000580654 ADAM19Q9H013 955 aa7.02□□□□□ -1.29
SMARCE1-217ENST00000580654 ZFP64Q9NPA5 681 aa7.02□□□□□ -1.29
SMARCE1-217ENST00000580654 PNO1Q9NRX1 252 aaKnown RBP7.02□□□□□ -1.29
SMARCE1-217ENST00000580654 QPCTLQ9NXS2 382 aa7.02□□□□□ -1.29
SMARCE1-217ENST00000580654 SAMD15Q9P1V8 674 aa7.02□□□□□ -1.29
SMARCE1-217ENST00000580654 TMA7Q9Y2S6 64 aaKnown RBP7.02□□□□□ -1.29
SMARCE1-217ENST00000580654 A0A096LNT2 108 aa7.01□□□□□ -1.29
SMARCE1-217ENST00000580654 CTAGE15A4D2H0 777 aa7.01□□□□□ -1.29
SMARCE1-217ENST00000580654 SERINC4A6NH21 518 aa7.01□□□□□ -1.29
SMARCE1-217ENST00000580654 C4orf51C9J302 202 aa7.01□□□□□ -1.29
SMARCE1-217ENST00000580654 APOC4-APOC2K7ER74 178 aa7.01□□□□□ -1.29
SMARCE1-217ENST00000580654 KPNA5O15131 536 aa7.01□□□□□ -1.29
SMARCE1-217ENST00000580654 NIPSNAP2O75323 286 aa7.01□□□□□ -1.29
SMARCE1-217ENST00000580654 PLAUP00749 431 aa7.01□□□□□ -1.29
SMARCE1-217ENST00000580654 APOC2P02655 101 aa7.01□□□□□ -1.29
SMARCE1-217ENST00000580654 TMEM253P0C7T8 217 aa7.01□□□□□ -1.29
SMARCE1-217ENST00000580654 ZNF888P0CJ79 500 aaPredicted RBP7.01□□□□□ -1.29
SMARCE1-217ENST00000580654 COMTP21964 271 aa7.01□□□□□ -1.29
SMARCE1-217ENST00000580654 RPS3P23396 243 aaKnown RBP eCLIP7.01□□□□□ -1.29
SMARCE1-217ENST00000580654 IMPA1P29218 277 aa7.01□□□□□ -1.29
SMARCE1-217ENST00000580654 ATP5DP30049 168 aa7.01□□□□□ -1.29
SMARCE1-217ENST00000580654 HSD17B2P37059 387 aa7.01□□□□□ -1.29
SMARCE1-217ENST00000580654 MARCKSL1P49006 195 aa7.01□□□□□ -1.29
SMARCE1-217ENST00000580654 HNRNPFP52597 415 aaKnown RBP7.01□□□□□ -1.29
SMARCE1-217ENST00000580654 EIF3BP55884 814 aaKnown RBP7.01□□□□□ -1.29
SMARCE1-217ENST00000580654 RPS6KA1Q15418 735 aa7.01□□□□□ -1.29
SMARCE1-217ENST00000580654 KLHL38Q2WGJ6 581 aa7.01□□□□□ -1.29
SMARCE1-217ENST00000580654 ZNF791Q3KP31 576 aaPredicted RBP7.01□□□□□ -1.29
SMARCE1-217ENST00000580654 PDLIM3Q53GG5 364 aaPredicted RBP7.01□□□□□ -1.29
SMARCE1-217ENST00000580654 FASTKD1Q53R41 847 aaKnown RBP7.01□□□□□ -1.29
SMARCE1-217ENST00000580654 ODF2Q5BJF6 829 aa7.01□□□□□ -1.29
SMARCE1-217ENST00000580654 THEMIS2Q5TEJ8 643 aa7.01□□□□□ -1.29
SMARCE1-217ENST00000580654 MEI1Q5TIA1 1274 aa7.01□□□□□ -1.29
SMARCE1-217ENST00000580654 HECTD2Q5U5R9 776 aa7.01□□□□□ -1.29
SMARCE1-217ENST00000580654 PRAMEF20Q5VT98 475 aa7.01□□□□□ -1.29
SMARCE1-217ENST00000580654 VASNQ6EMK4 673 aa7.01□□□□□ -1.29
SMARCE1-217ENST00000580654 SYDE1Q6ZW31 735 aaPredicted RBP7.01□□□□□ -1.29
SMARCE1-217ENST00000580654 BBS12Q6ZW61 710 aa7.01□□□□□ -1.29
SMARCE1-217ENST00000580654 CTAGE6Q86UF2 777 aa7.01□□□□□ -1.29
SMARCE1-217ENST00000580654 CA13Q8N1Q1 262 aa7.01□□□□□ -1.29
SMARCE1-217ENST00000580654 LIX1Q8N485 282 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms