RNA–Protein interactions for RNA: ENST00000578861.5

SNX11-205, Transcript of sorting nexin 11, humanhuman

TSL 4

Gene SNX11, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-205ENST00000578861 TIAL1Q01085 375 aaKnown RBP eCLIP8.21□□□□□ -1.1
SNX11-205ENST00000578861 DHX9Q08211 1270 aaKnown RBP8.21□□□□□ -1.1
SNX11-205ENST00000578861 TNK1Q13470 666 aa8.21□□□□□ -1.1
SNX11-205ENST00000578861 RBM20Q5T481 1227 aaKnown RBP8.21□□□□□ -1.1
SNX11-205ENST00000578861 UGT3A1Q6NUS8 523 aa8.21□□□□□ -1.1
SNX11-205ENST00000578861 LCTLQ6UWM7 567 aa8.21□□□□□ -1.1
SNX11-205ENST00000578861 C12orf54Q6X4T0 127 aa8.21□□□□□ -1.1
SNX11-205ENST00000578861 ZNF227Q86WZ6 799 aa8.21□□□□□ -1.1
SNX11-205ENST00000578861 GAS2L3Q86XJ1 694 aa8.21□□□□□ -1.1
SNX11-205ENST00000578861 SULF2Q8IWU5 870 aa8.21□□□□□ -1.1
SNX11-205ENST00000578861 MYO1HQ8N1T3 1032 aa8.21□□□□□ -1.1
SNX11-205ENST00000578861 AFAP1L2Q8N4X5 818 aa8.21□□□□□ -1.1
SNX11-205ENST00000578861 CALML6Q8TD86 181 aa8.21□□□□□ -1.1
SNX11-205ENST00000578861 SREK1Q8WXA9 508 aaKnown RBP8.21□□□□□ -1.1
SNX11-205ENST00000578861 RNASE6Q93091 150 aaKnown RBP8.21□□□□□ -1.1
SNX11-205ENST00000578861 LINGO1Q96FE5 620 aa8.21□□□□□ -1.1
SNX11-205ENST00000578861 SNF8Q96H20 258 aa8.21□□□□□ -1.1
SNX11-205ENST00000578861 HIST1H2AHQ96KK5 128 aa8.21□□□□□ -1.1
SNX11-205ENST00000578861 TSNARE1Q96NA8 513 aa8.21□□□□□ -1.1
SNX11-205ENST00000578861 SERPINB12Q96P63 405 aa8.21□□□□□ -1.1
SNX11-205ENST00000578861 PIP5K1AQ99755 562 aa8.21□□□□□ -1.1
SNX11-205ENST00000578861 OLFM1Q99784 485 aa8.21□□□□□ -1.1
SNX11-205ENST00000578861 HIST1H2AJQ99878 128 aa8.21□□□□□ -1.1
SNX11-205ENST00000578861 HAUS8Q9BT25 410 aa8.21□□□□□ -1.1
SNX11-205ENST00000578861 FAM167BQ9BTA0 163 aa8.21□□□□□ -1.1
SNX11-205ENST00000578861 H2AFJQ9BTM1 129 aa8.21□□□□□ -1.1
SNX11-205ENST00000578861 BEX2Q9BXY8 128 aa8.21□□□□□ -1.1
SNX11-205ENST00000578861 DEFB126Q9BYW3 111 aa8.21□□□□□ -1.1
SNX11-205ENST00000578861 FAM129AQ9BZQ8 928 aa8.21□□□□□ -1.1
SNX11-205ENST00000578861 NECTIN3Q9NQS3 549 aa8.21□□□□□ -1.1
SNX11-205ENST00000578861 ARL15Q9NXU5 204 aa8.21□□□□□ -1.1
SNX11-205ENST00000578861 TAS2R13Q9NYV9 303 aa8.21□□□□□ -1.1
SNX11-205ENST00000578861 FREM3P0C091 2139 aa8.21□□□□□ -1.1
SNX11-205ENST00000578861 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.2□□□□□ -1.19e-9■■■■■ 32.9
SNX11-205ENST00000578861 TRBV11-1A0A0K0K1C0 115 aa8.2□□□□□ -1.1
SNX11-205ENST00000578861 TRBC2A0A5B9 178 aa8.2□□□□□ -1.1
SNX11-205ENST00000578861 CTAGE15A4D2H0 777 aa8.2□□□□□ -1.1
SNX11-205ENST00000578861 PABPN1LA6NDY0 278 aaKnown RBP8.2□□□□□ -1.1
SNX11-205ENST00000578861 SERINC4A6NH21 518 aa8.2□□□□□ -1.1
SNX11-205ENST00000578861 SAGE2PA6NJ88 616 aa8.2□□□□□ -1.1
SNX11-205ENST00000578861 PSMD12O00232 456 aaPredicted RBP8.2□□□□□ -1.1
SNX11-205ENST00000578861 EIF3FO00303 357 aaPredicted RBP8.2□□□□□ -1.1
SNX11-205ENST00000578861 FCHO1O14526 889 aa8.2□□□□□ -1.1
SNX11-205ENST00000578861 PEX1O43933 1283 aa8.2□□□□□ -1.1
SNX11-205ENST00000578861 GUCA1CO95843 209 aa8.2□□□□□ -1.1
SNX11-205ENST00000578861 HRGP04196 525 aa8.2□□□□□ -1.1
SNX11-205ENST00000578861 BMP5P22003 454 aa8.2□□□□□ -1.1
SNX11-205ENST00000578861 NR0B1P51843 470 aaKnown RBP8.2□□□□□ -1.1
SNX11-205ENST00000578861 GPR85P60893 370 aa8.2□□□□□ -1.1
SNX11-205ENST00000578861 RGS1Q08116 209 aa8.2□□□□□ -1.1
SNX11-205ENST00000578861 PWP1Q13610 501 aa8.2□□□□□ -1.1
SNX11-205ENST00000578861 CSHL1Q14406 222 aa8.2□□□□□ -1.1
SNX11-205ENST00000578861 CMPK2Q5EBM0 449 aa8.2□□□□□ -1.1
SNX11-205ENST00000578861 ARMC3Q5W041 872 aa8.2□□□□□ -1.1
SNX11-205ENST00000578861 LRRC8EQ6NSJ5 796 aa8.2□□□□□ -1.1
SNX11-205ENST00000578861 ABHD13Q7L211 337 aa8.2□□□□□ -1.1
SNX11-205ENST00000578861 CTAGE6Q86UF2 777 aa8.2□□□□□ -1.1
SNX11-205ENST00000578861 LMNTD2Q8IXW0 634 aa8.2□□□□□ -1.1
SNX11-205ENST00000578861 TBC1D19Q8N5T2 526 aa8.2□□□□□ -1.1
SNX11-205ENST00000578861 MCUQ8NE86 351 aa8.2□□□□□ -1.1
SNX11-205ENST00000578861 NFAM1Q8NET5 270 aaPredicted RBP8.2□□□□□ -1.1
SNX11-205ENST00000578861 ABHD11Q8NFV4 315 aa8.2□□□□□ -1.1
SNX11-205ENST00000578861 OR4K1Q8NGD4 311 aa8.2□□□□□ -1.1
SNX11-205ENST00000578861 UTP15Q8TED0 518 aaKnown RBP8.2□□□□□ -1.1
SNX11-205ENST00000578861 NEIL2Q969S2 332 aa8.2□□□□□ -1.1
SNX11-205ENST00000578861 MAGOHBQ96A72 148 aaKnown RBP8.2□□□□□ -1.1
SNX11-205ENST00000578861 MS4A14Q96JA4 679 aa8.2□□□□□ -1.1
SNX11-205ENST00000578861 LCORQ96JN0 433 aaPredicted RBP8.2□□□□□ -1.1
SNX11-205ENST00000578861 SIGLEC10Q96LC7 697 aa8.2□□□□□ -1.1
SNX11-205ENST00000578861 OR4K3Q96R72 315 aa8.2□□□□□ -1.1
SNX11-205ENST00000578861 TRIM54Q9BYV2 358 aa8.2□□□□□ -1.1
SNX11-205ENST00000578861 SPNS1Q9H2V7 528 aa8.2□□□□□ -1.1
SNX11-205ENST00000578861 KLHL31Q9H511 634 aa8.2□□□□□ -1.1
SNX11-205ENST00000578861 UBTD1Q9HAC8 227 aa8.2□□□□□ -1.1
SNX11-205ENST00000578861 ZFATQ9P243 1243 aa8.2□□□□□ -1.1
SNX11-205ENST00000578861 SLC17A6Q9P2U8 582 aa8.2□□□□□ -1.1
SNX11-205ENST00000578861 FBXW2Q9UKT8 454 aa8.2□□□□□ -1.1
SNX11-205ENST00000578861 KLF13Q9Y2Y9 288 aaPredicted RBP8.2□□□□□ -1.1
SNX11-205ENST00000578861 ARHGAP21Q5T5U3 1957 aa8.2□□□□□ -1.1
SNX11-205ENST00000578861 ANK3Q12955 4377 aaKnown RBP8.19□□□□□ -1.1
SNX11-205ENST00000578861 NCKAP5O14513 1909 aa8.19□□□□□ -1.1
SNX11-205ENST00000578861 FIGNL2A6NMB9 653 aa8.19□□□□□ -1.1
SNX11-205ENST00000578861 GOLGA6L6A8MZA4 724 aa8.19□□□□□ -1.1
SNX11-205ENST00000578861 KLRC4-KLRK1H3BQV0 150 aa8.19□□□□□ -1.1
SNX11-205ENST00000578861 SLC16A5O15375 505 aa8.19□□□□□ -1.1
SNX11-205ENST00000578861 BANF1O75531 89 aa8.19□□□□□ -1.1
SNX11-205ENST00000578861 MYO1DO94832 1006 aa8.19□□□□□ -1.1
SNX11-205ENST00000578861 RNH1P13489 461 aaKnown RBP8.19□□□□□ -1.1
SNX11-205ENST00000578861 EGR1P18146 543 aa8.19□□□□□ -1.1
SNX11-205ENST00000578861 GABRB3P28472 473 aa8.19□□□□□ -1.1
SNX11-205ENST00000578861 CDC25BP30305 580 aa8.19□□□□□ -1.1
SNX11-205ENST00000578861 TRHRP34981 398 aaPredicted RBP8.19□□□□□ -1.1
SNX11-205ENST00000578861 IL2P60568 153 aa8.19□□□□□ -1.1
SNX11-205ENST00000578861 SKP1P63208 163 aa8.19□□□□□ -1.1
SNX11-205ENST00000578861 SP140Q13342 867 aa8.19□□□□□ -1.1
SNX11-205ENST00000578861 RBBP5Q15291 538 aaKnown RBP8.19□□□□□ -1.1
SNX11-205ENST00000578861 TOR1AIP1Q5JTV8 583 aa8.19□□□□□ -1.1
SNX11-205ENST00000578861 DUPD1Q68J44 220 aa8.19□□□□□ -1.1
SNX11-205ENST00000578861 MDGA2Q7Z553 956 aa8.19□□□□□ -1.1
SNX11-205ENST00000578861 CYP4Z2PQ8N1L4 340 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms