RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 NEK2P51955 445 aa20.85■□□□□ 0.93
SMARCD2-206ENST00000577990 BTG2P78543 158 aa20.85■□□□□ 0.93
SMARCD2-206ENST00000577990 IFT88Q13099 833 aa20.85■□□□□ 0.93
SMARCD2-206ENST00000577990 RCN2Q14257 317 aa20.85■□□□□ 0.93
SMARCD2-206ENST00000577990 ACOT4Q8N9L9 421 aa20.85■□□□□ 0.93
SMARCD2-206ENST00000577990 TEX19Q8NA77 164 aa20.85■□□□□ 0.93
SMARCD2-206ENST00000577990 RDH11Q8TC12 318 aa20.85■□□□□ 0.93
SMARCD2-206ENST00000577990 APOPT1Q96IL0 206 aa20.85■□□□□ 0.93
SMARCD2-206ENST00000577990 ZNF382Q96SR6 550 aa20.85■□□□□ 0.93
SMARCD2-206ENST00000577990 WDR77Q9BQA1 342 aaPredicted RBP20.85■□□□□ 0.93
SMARCD2-206ENST00000577990 LYRM4Q9HD34 91 aa20.85■□□□□ 0.93
SMARCD2-206ENST00000577990 MKS1Q9NXB0 559 aa20.85■□□□□ 0.93
SMARCD2-206ENST00000577990 TRPS1Q9UHF7 1281 aa20.85■□□□□ 0.93
SMARCD2-206ENST00000577990 ANAPC2Q9UJX6 822 aa20.85■□□□□ 0.93
SMARCD2-206ENST00000577990 PPT2Q9UMR5 302 aa20.85■□□□□ 0.93
SMARCD2-206ENST00000577990 MRPS33Q9Y291 106 aaKnown RBP20.85■□□□□ 0.93
SMARCD2-206ENST00000577990 MMACHCQ9Y4U1 282 aa20.85■□□□□ 0.93
SMARCD2-206ENST00000577990 LRRK2Q5S007 2527 aa20.84■□□□□ 0.93
SMARCD2-206ENST00000577990 DPM1O60762 260 aa20.84■□□□□ 0.93
SMARCD2-206ENST00000577990 MLYCDO95822 493 aa20.84■□□□□ 0.93
SMARCD2-206ENST00000577990 PRR35P0CG20 571 aa20.84■□□□□ 0.93
SMARCD2-206ENST00000577990 ICAM2P13598 275 aa20.84■□□□□ 0.93
SMARCD2-206ENST00000577990 TSFMP43897 325 aaKnown RBP20.84■□□□□ 0.93
SMARCD2-206ENST00000577990 ARFIP1P53367 373 aa20.84■□□□□ 0.93
SMARCD2-206ENST00000577990 CUL3Q13618 768 aa20.84■□□□□ 0.93
SMARCD2-206ENST00000577990 SFT2D3Q587I9 215 aa20.84■□□□□ 0.93
SMARCD2-206ENST00000577990 AGAP7PQ5VUJ5 663 aa20.84■□□□□ 0.93
SMARCD2-206ENST00000577990 OR4C11Q6IEV9 310 aa20.84■□□□□ 0.93
SMARCD2-206ENST00000577990 RIPOR1Q6ZS17 1223 aa20.84■□□□□ 0.93
SMARCD2-206ENST00000577990 SRRM1Q8IYB3 904 aaKnown RBP20.84■□□□□ 0.93
SMARCD2-206ENST00000577990 CCDC63Q8NA47 563 aa20.84■□□□□ 0.93
SMARCD2-206ENST00000577990 FAM47BQ8NA70 645 aa20.84■□□□□ 0.93
SMARCD2-206ENST00000577990 ARMC2Q8NEN0 867 aa20.84■□□□□ 0.93
SMARCD2-206ENST00000577990 MYRIPQ8NFW9 859 aa20.84■□□□□ 0.93
SMARCD2-206ENST00000577990 MTFMTQ96DP5 389 aaKnown RBP20.84■□□□□ 0.93
SMARCD2-206ENST00000577990 IMMP1LQ96LU5 166 aa20.84■□□□□ 0.93
SMARCD2-206ENST00000577990 AGAP4Q96P64 663 aa20.84■□□□□ 0.93
SMARCD2-206ENST00000577990 SORBS1Q9BX66 1292 aaKnown RBP20.84■□□□□ 0.93
SMARCD2-206ENST00000577990 IQCGQ9H095 443 aaKnown RBP20.84■□□□□ 0.93
SMARCD2-206ENST00000577990 C12orf65Q9H3J6 166 aaKnown RBP20.84■□□□□ 0.93
SMARCD2-206ENST00000577990 ELOVL6Q9H5J4 265 aa20.84■□□□□ 0.93
SMARCD2-206ENST00000577990 MID2Q9UJV3 735 aa20.84■□□□□ 0.93
SMARCD2-206ENST00000577990 ZNF225Q9UK10 706 aa20.84■□□□□ 0.93
SMARCD2-206ENST00000577990 STK38LQ9Y2H1 464 aa20.84■□□□□ 0.93
SMARCD2-206ENST00000577990 DOPEY2Q9Y3R5 2298 aa20.84■□□□□ 0.93
SMARCD2-206ENST00000577990 RP1L1Q8IWN7 2480 aaPredicted RBP20.83■□□□□ 0.93
SMARCD2-206ENST00000577990 IGKV3D-11A0A0A0MRZ8 115 aa20.83■□□□□ 0.93
SMARCD2-206ENST00000577990 PLPP1O14494 284 aa20.83■□□□□ 0.93
SMARCD2-206ENST00000577990 OR4F21O95013 312 aa20.83■□□□□ 0.93
SMARCD2-206ENST00000577990 ETHE1O95571 254 aa20.83■□□□□ 0.93
SMARCD2-206ENST00000577990 CELA2AP08217 269 aa20.83■□□□□ 0.93
SMARCD2-206ENST00000577990 MAOAP21397 527 aa20.83■□□□□ 0.93
SMARCD2-206ENST00000577990 CASRP41180 1078 aa20.83■□□□□ 0.93
SMARCD2-206ENST00000577990 OR4D2P58180 307 aa20.83■□□□□ 0.93
SMARCD2-206ENST00000577990 AP2B1P63010 937 aa20.83■□□□□ 0.93
SMARCD2-206ENST00000577990 ACTN3Q08043 901 aaPredicted RBP20.83■□□□□ 0.93
SMARCD2-206ENST00000577990 LCP2Q13094 533 aa20.83■□□□□ 0.93
SMARCD2-206ENST00000577990 PAPD4Q6PIY7 484 aaKnown RBP20.83■□□□□ 0.93
SMARCD2-206ENST00000577990 GPRIN3Q6ZVF9 776 aa20.83■□□□□ 0.93
SMARCD2-206ENST00000577990 SCUBE1Q8IWY4 988 aa20.83■□□□□ 0.93
SMARCD2-206ENST00000577990 CCNYL1Q8N7R7 359 aa20.83■□□□□ 0.93
SMARCD2-206ENST00000577990 BANPQ8N9N5 519 aa20.83■□□□□ 0.93
SMARCD2-206ENST00000577990 CSF3RQ99062 836 aa20.83■□□□□ 0.93
SMARCD2-206ENST00000577990 SERPINI1Q99574 410 aa20.83■□□□□ 0.93
SMARCD2-206ENST00000577990 MAPKAP1Q9BPZ7 522 aa20.83■□□□□ 0.93
SMARCD2-206ENST00000577990 NECTIN3Q9NQS3 549 aa20.83■□□□□ 0.93
SMARCD2-206ENST00000577990 PRTFDC1Q9NRG1 225 aa20.83■□□□□ 0.93
SMARCD2-206ENST00000577990 KCMF1Q9P0J7 381 aa20.83■□□□□ 0.93
SMARCD2-206ENST00000577990 SNX6Q9UNH7 406 aa20.83■□□□□ 0.93
SMARCD2-206ENST00000577990 TCRBV16S1A1N1A0A5B0 115 aa20.82■□□□□ 0.92
SMARCD2-206ENST00000577990 CYR61O00622 381 aa20.82■□□□□ 0.92
SMARCD2-206ENST00000577990 CLDN4O14493 209 aa20.82■□□□□ 0.92
SMARCD2-206ENST00000577990 SEMA3DO95025 777 aa20.82■□□□□ 0.92
SMARCD2-206ENST00000577990 CPA3P15088 417 aa20.82■□□□□ 0.92
SMARCD2-206ENST00000577990 HNRNPFP52597 415 aaKnown RBP20.82■□□□□ 0.92
SMARCD2-206ENST00000577990 HSD17B7P56937 341 aa20.82■□□□□ 0.92
SMARCD2-206ENST00000577990 ZNF844Q08AG5 666 aa20.82■□□□□ 0.92
SMARCD2-206ENST00000577990 IGFBP7Q16270 282 aa20.82■□□□□ 0.92
SMARCD2-206ENST00000577990 KRT71Q3SY84 523 aa20.82■□□□□ 0.92
SMARCD2-206ENST00000577990 PLAG1Q6DJT9 500 aa20.82■□□□□ 0.92
SMARCD2-206ENST00000577990 JMJD6Q6NYC1 403 aaPredicted RBP20.82■□□□□ 0.92
SMARCD2-206ENST00000577990 ZNF595Q8IYB9 648 aa20.82■□□□□ 0.92
SMARCD2-206ENST00000577990 ZCCHC7Q8N3Z6 543 aaKnown RBP20.82■□□□□ 0.92
SMARCD2-206ENST00000577990 TMEM52Q8NDY8 209 aa20.82■□□□□ 0.92
SMARCD2-206ENST00000577990 BRIX1Q8TDN6 353 aaKnown RBP20.82■□□□□ 0.92
SMARCD2-206ENST00000577990 TM9SF4Q92544 642 aa20.82■□□□□ 0.92
SMARCD2-206ENST00000577990 LPAR4Q99677 370 aa20.82■□□□□ 0.92
SMARCD2-206ENST00000577990 ZNF717Q9BY31 904 aaPredicted RBP20.82■□□□□ 0.92
SMARCD2-206ENST00000577990 GSTO2Q9H4Y5 243 aa20.82■□□□□ 0.92
SMARCD2-206ENST00000577990 PLLPQ9Y342 182 aa20.82■□□□□ 0.92
SMARCD2-206ENST00000577990 SPACA6W5XKT8 324 aa20.82■□□□□ 0.92
SMARCD2-206ENST00000577990 DNAJB13P59910 316 aa20.81■□□□□ 0.92
SMARCD2-206ENST00000577990 NAA20P61599 178 aa20.81■□□□□ 0.92
SMARCD2-206ENST00000577990 SLC13A2Q13183 592 aa20.81■□□□□ 0.92
SMARCD2-206ENST00000577990 EXT1Q16394 746 aa20.81■□□□□ 0.92
SMARCD2-206ENST00000577990 BTBD16Q32M84 506 aa20.81■□□□□ 0.92
SMARCD2-206ENST00000577990 SGO1Q5FBB7 561 aa20.81■□□□□ 0.92
SMARCD2-206ENST00000577990 IGFL3Q6UXB1 125 aa20.81■□□□□ 0.92
SMARCD2-206ENST00000577990 RBMXL3Q8N7X1 1067 aaKnown RBP20.81■□□□□ 0.92
SMARCD2-206ENST00000577990 CDYL2Q8N8U2 506 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms