RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 CATSPEREQ5SY80 951 aa12.38□□□□□ -0.43
COPS3-214ENST00000577246 OPN5Q6U736 354 aa12.38□□□□□ -0.43
COPS3-214ENST00000577246 ZNF595Q8IYB9 648 aa12.38□□□□□ -0.43
COPS3-214ENST00000577246 FBXW8Q8N3Y1 598 aa12.38□□□□□ -0.43
COPS3-214ENST00000577246 TTLQ8NG68 377 aa12.38□□□□□ -0.43
COPS3-214ENST00000577246 OR5L2Q8NGL0 311 aa12.38□□□□□ -0.43
COPS3-214ENST00000577246 OR8K3Q8NH51 312 aa12.38□□□□□ -0.43
COPS3-214ENST00000577246 RNASE6Q93091 150 aaKnown RBP12.38□□□□□ -0.43
COPS3-214ENST00000577246 NEIL2Q969S2 332 aa12.38□□□□□ -0.43
COPS3-214ENST00000577246 GAL3ST3Q96A11 431 aa12.38□□□□□ -0.43
COPS3-214ENST00000577246 FBXL8Q96CD0 374 aa12.38□□□□□ -0.43
COPS3-214ENST00000577246 LINGO1Q96FE5 620 aa12.38□□□□□ -0.43
COPS3-214ENST00000577246 SMIM10Q96HG1 83 aa12.38□□□□□ -0.43
COPS3-214ENST00000577246 PELI2Q9HAT8 420 aa12.38□□□□□ -0.43
COPS3-214ENST00000577246 NEUROD4Q9HD90 331 aa12.38□□□□□ -0.43
COPS3-214ENST00000577246 DMRT3Q9NQL9 472 aa12.38□□□□□ -0.43
COPS3-214ENST00000577246 ALKBH4Q9NXW9 302 aa12.38□□□□□ -0.43
COPS3-214ENST00000577246 LIPGQ9Y5X9 500 aa12.38□□□□□ -0.43
COPS3-214ENST00000577246 DNHD1Q96M86 4753 aa12.37□□□□□ -0.43
COPS3-214ENST00000577246 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.37□□□□□ -0.43
COPS3-214ENST00000577246 TRGV5A0A0B4J1U4 118 aa12.37□□□□□ -0.43
COPS3-214ENST00000577246 G3V3Y1 287 aa12.37□□□□□ -0.43
COPS3-214ENST00000577246 WWP2O00308 870 aa12.37□□□□□ -0.43
COPS3-214ENST00000577246 HAUS5O94927 633 aa12.37□□□□□ -0.43
COPS3-214ENST00000577246 IFNA16P05015 189 aa12.37□□□□□ -0.43
COPS3-214ENST00000577246 ENO2P09104 434 aaPredicted RBP12.37□□□□□ -0.43
COPS3-214ENST00000577246 INHBBP09529 407 aa12.37□□□□□ -0.43
COPS3-214ENST00000577246 GSTM2P28161 218 aa12.37□□□□□ -0.43
COPS3-214ENST00000577246 NR0B1P51843 470 aaKnown RBP12.37□□□□□ -0.43
COPS3-214ENST00000577246 IL2P60568 153 aa12.37□□□□□ -0.43
COPS3-214ENST00000577246 BTN3A2P78410 334 aa12.37□□□□□ -0.43
COPS3-214ENST00000577246 RBBP5Q15291 538 aaKnown RBP12.37□□□□□ -0.43
COPS3-214ENST00000577246 SIX1Q15475 284 aaPredicted RBP12.37□□□□□ -0.43
COPS3-214ENST00000577246 FBXL19-AS1Q494R0 122 aa12.37□□□□□ -0.43
COPS3-214ENST00000577246 XKR6Q5GH73 641 aa12.37□□□□□ -0.43
COPS3-214ENST00000577246 TOR1AIP1Q5JTV8 583 aa12.37□□□□□ -0.43
COPS3-214ENST00000577246 CLEC9AQ6UXN8 241 aa12.37□□□□□ -0.43
COPS3-214ENST00000577246 CAND1Q86VP6 1230 aaKnown RBP12.37□□□□□ -0.43
COPS3-214ENST00000577246 KIF18BQ86Y91 864 aa12.37□□□□□ -0.43
COPS3-214ENST00000577246 MORN4Q8NDC4 146 aa12.37□□□□□ -0.43
COPS3-214ENST00000577246 C7orf57Q8NEG2 295 aa12.37□□□□□ -0.43
COPS3-214ENST00000577246 OR14A16Q8NHC5 309 aa12.37□□□□□ -0.43
COPS3-214ENST00000577246 OR4K3Q96R72 315 aa12.37□□□□□ -0.43
COPS3-214ENST00000577246 CBLCQ9ULV8 474 aa12.37□□□□□ -0.43
COPS3-214ENST00000577246 KCNE2Q9Y6J6 123 aa12.37□□□□□ -0.43
COPS3-214ENST00000577246 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.37□□□□□ -0.43
COPS3-214ENST00000577246 ABCA4P78363 2273 aa12.37□□□□□ -0.43
COPS3-214ENST00000577246 FBN3Q75N90 2809 aa12.36□□□□□ -0.43
COPS3-214ENST00000577246 A0A0G2JMM0 328 aa12.36□□□□□ -0.43
COPS3-214ENST00000577246 A0A1W2PPB8 328 aa12.36□□□□□ -0.43
COPS3-214ENST00000577246 A0A1W2PRS3 328 aa12.36□□□□□ -0.43
COPS3-214ENST00000577246 KIR3DP1A8MWS1 328 aa12.36□□□□□ -0.43
COPS3-214ENST00000577246 B3GALT2O43825 422 aa12.36□□□□□ -0.43
COPS3-214ENST00000577246 PRKNO60260 465 aaPredicted RBP12.36□□□□□ -0.43
COPS3-214ENST00000577246 ATE1O95260 518 aa12.36□□□□□ -0.43
COPS3-214ENST00000577246 F7P08709 466 aaPredicted RBP12.36□□□□□ -0.43
COPS3-214ENST00000577246 SAT1P21673 171 aa12.36□□□□□ -0.43
COPS3-214ENST00000577246 BMP5P22003 454 aa12.36□□□□□ -0.43
COPS3-214ENST00000577246 TERF1P54274 439 aa12.36□□□□□ -0.43
COPS3-214ENST00000577246 RAB38P57729 211 aa12.36□□□□□ -0.43
COPS3-214ENST00000577246 CCZ1BP86790 482 aa12.36□□□□□ -0.43
COPS3-214ENST00000577246 CCZ1P86791 482 aaPredicted RBP12.36□□□□□ -0.43
COPS3-214ENST00000577246 GPS1Q13098 491 aa12.36□□□□□ -0.43
COPS3-214ENST00000577246 SNTB1Q13884 538 aaKnown RBP12.36□□□□□ -0.43
COPS3-214ENST00000577246 EFTUD2Q15029 972 aaKnown RBP eCLIP12.36□□□□□ -0.432e-6■■■■■ 32.8
COPS3-214ENST00000577246 SF3B4Q15427 424 aaKnown RBP eCLIP12.36□□□□□ -0.432e-6■■■□□ 16.9
COPS3-214ENST00000577246 ZNF750Q32MQ0 723 aa12.36□□□□□ -0.43
COPS3-214ENST00000577246 PAQR3Q6TCH7 311 aa12.36□□□□□ -0.43
COPS3-214ENST00000577246 NXPE4Q6UWF7 544 aa12.36□□□□□ -0.43
COPS3-214ENST00000577246 C16orf47Q6ZP98 133 aaPredicted RBP12.36□□□□□ -0.43
COPS3-214ENST00000577246 MAATS1Q7Z4T9 603 aa12.36□□□□□ -0.43
COPS3-214ENST00000577246 TMPRSS11BQ86T26 416 aa12.36□□□□□ -0.43
COPS3-214ENST00000577246 ANKRD53Q8N9V6 530 aa12.36□□□□□ -0.43
COPS3-214ENST00000577246 WFDC11Q8NEX6 87 aa12.36□□□□□ -0.43
COPS3-214ENST00000577246 SLCO2A1Q92959 643 aa12.36□□□□□ -0.43
COPS3-214ENST00000577246 SCYL1Q96KG9 808 aa12.36□□□□□ -0.43
COPS3-214ENST00000577246 TSNARE1Q96NA8 513 aa12.36□□□□□ -0.43
COPS3-214ENST00000577246 NDNQ99608 321 aa12.36□□□□□ -0.43
COPS3-214ENST00000577246 COPS7AQ9UBW8 275 aa12.36□□□□□ -0.43
COPS3-214ENST00000577246 ZNF629Q9UEG4 869 aaPredicted RBP12.36□□□□□ -0.43
COPS3-214ENST00000577246 BOKQ9UMX3 212 aaPredicted RBP12.36□□□□□ -0.43
COPS3-214ENST00000577246 PHF3Q92576 2039 aaKnown RBP12.35□□□□□ -0.43
COPS3-214ENST00000577246 SCN3AQ9NY46 2000 aa12.35□□□□□ -0.43
COPS3-214ENST00000577246 TUBAL3A6NHL2 446 aa12.35□□□□□ -0.43
COPS3-214ENST00000577246 NRDCO43847 1150 aa12.35□□□□□ -0.43
COPS3-214ENST00000577246 FGGP02679 453 aa12.35□□□□□ -0.43
COPS3-214ENST00000577246 HEXAP06865 529 aa12.35□□□□□ -0.43
COPS3-214ENST00000577246 EPXP11678 715 aa12.35□□□□□ -0.43
COPS3-214ENST00000577246 TACR1P25103 407 aa12.35□□□□□ -0.43
COPS3-214ENST00000577246 PPP2R1BP30154 601 aa12.35□□□□□ -0.43
COPS3-214ENST00000577246 HOXC12P31275 282 aa12.35□□□□□ -0.43
COPS3-214ENST00000577246 KCNJ1P48048 391 aa12.35□□□□□ -0.43
COPS3-214ENST00000577246 VPS41P49754 854 aa12.35□□□□□ -0.43
COPS3-214ENST00000577246 HK2P52789 917 aa12.35□□□□□ -0.43
COPS3-214ENST00000577246 FOXO1Q12778 655 aa12.35□□□□□ -0.43
COPS3-214ENST00000577246 PDAP1Q13442 181 aaKnown RBP12.35□□□□□ -0.43
COPS3-214ENST00000577246 HSP90AA5PQ58FG0 334 aa12.35□□□□□ -0.43
COPS3-214ENST00000577246 SHEQ5VZ18 495 aa12.35□□□□□ -0.43
COPS3-214ENST00000577246 LIX1Q8N485 282 aa12.35□□□□□ -0.43
COPS3-214ENST00000577246 C2CD4AQ8NCU7 369 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms