RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 HSPB2A8KAH6 182 aa9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 SUSD5O60279 629 aa9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 C8GP07360 202 aa9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 HIST1H2AGP0C0S8 130 aaPredicted RBP9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 RFPL3SP0C7P2 107 aa9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 CCL3P10147 92 aa9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 EPXP11678 715 aa9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 PAMP19021 973 aa9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 TPSB2P20231 275 aa9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 HIST1H2ADP20671 130 aa9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 PIGAP37287 484 aa9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 PEX19P40855 299 aa9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 SLC1A2P43004 574 aa9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 HK2P52789 917 aa9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 PGGT1BP53609 377 aa9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 DHX9Q08211 1270 aaKnown RBP9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 SLC13A2Q13183 592 aa9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 CSHL1Q14406 222 aa9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 RBBP5Q15291 538 aaKnown RBP9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 TERF2Q15554 542 aa9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 TRIP13Q15645 432 aaPredicted RBP9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 TPSAB1Q15661 275 aa9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 HSPB2Q16082 182 aa9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 CCNG2Q16589 344 aa9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 HYAL4Q2M3T9 481 aa9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 TOR1AIP1Q5JTV8 583 aa9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 UGT3A1Q6NUS8 523 aa9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 POMZP3Q6PJE2 187 aa9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 PAQR3Q6TCH7 311 aa9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 RTL4Q6ZR62 310 aa9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 GK5Q6ZS86 529 aa9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 GSTA5Q7RTV2 222 aa9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 STRA8Q7Z7C7 330 aa9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 CLNKQ7Z7G1 428 aa9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 CAND1Q86VP6 1230 aaKnown RBP9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 SCUBE1Q8IWY4 988 aa9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 PALM2Q8IXS6 379 aa9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 CIARTQ8N365 385 aaPredicted RBP9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 VWA5B2Q8N398 1253 aa9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 LRRN4CLQ8ND94 238 aa9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 TNIP2Q8NFZ5 429 aa9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 OR56A3Q8NH54 315 aa9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 SLC5A11Q8WWX8 675 aa9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 NANOS1Q8WY41 292 aaKnown RBP9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 RNASE6Q93091 150 aaKnown RBP9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 NEIL2Q969S2 332 aa9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 HIST1H2AHQ96KK5 128 aa9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 HIST1H2AJQ99878 128 aa9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 AARSD1Q9BTE6 412 aaKnown RBP9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 H2AFJQ9BTM1 129 aa9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 TRIM5Q9C035 493 aa9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 EPB41L4BQ9H329 900 aa9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 CLK4Q9HAZ1 481 aaKnown RBP9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 NEUROD4Q9HD90 331 aa9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 B4GALT7Q9UBV7 327 aa9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 TRMT6Q9UJA5 497 aaKnown RBP9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 MMACHCQ9Y4U1 282 aa9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 CAPN6Q9Y6Q1 641 aa9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 CSPG4Q6UVK1 2322 aa9.34□□□□□ -0.91
NPLOC4-220ENST00000576940 ARHGAP21Q5T5U3 1957 aa9.34□□□□□ -0.91
NPLOC4-220ENST00000576940 URADA6NGE7 173 aa9.34□□□□□ -0.91
NPLOC4-220ENST00000576940 TUBAL3A6NHL2 446 aa9.34□□□□□ -0.91
NPLOC4-220ENST00000576940 EIF3FO00303 357 aaPredicted RBP9.34□□□□□ -0.91
NPLOC4-220ENST00000576940 GUCA1CO95843 209 aa9.34□□□□□ -0.91
NPLOC4-220ENST00000576940 P04436 131 aa9.34□□□□□ -0.91
NPLOC4-220ENST00000576940 IFNA16P05015 189 aa9.34□□□□□ -0.91
NPLOC4-220ENST00000576940 GABRA1P14867 456 aa9.34□□□□□ -0.91
NPLOC4-220ENST00000576940 CD53P19397 219 aa9.34□□□□□ -0.91
NPLOC4-220ENST00000576940 AHRP35869 848 aa9.34□□□□□ -0.91
NPLOC4-220ENST00000576940 AGFG1P52594 562 aaKnown RBP9.34□□□□□ -0.91
NPLOC4-220ENST00000576940 KIF5AQ12840 1032 aa9.34□□□□□ -0.91
NPLOC4-220ENST00000576940 POU4F3Q15319 338 aa9.34□□□□□ -0.91
NPLOC4-220ENST00000576940 ANKRD22Q5VYY1 191 aa9.34□□□□□ -0.91
NPLOC4-220ENST00000576940 DUPD1Q68J44 220 aa9.34□□□□□ -0.91
NPLOC4-220ENST00000576940 HSDL2Q6YN16 418 aa9.34□□□□□ -0.91
NPLOC4-220ENST00000576940 ULK2Q8IYT8 1036 aa9.34□□□□□ -0.91
NPLOC4-220ENST00000576940 TBC1D19Q8N5T2 526 aa9.34□□□□□ -0.91
NPLOC4-220ENST00000576940 TSNARE1Q96NA8 513 aa9.34□□□□□ -0.91
NPLOC4-220ENST00000576940 SACM1LQ9NTJ5 587 aa9.34□□□□□ -0.91
NPLOC4-220ENST00000576940 C20orf96Q9NUD7 363 aaPredicted RBP9.34□□□□□ -0.91
NPLOC4-220ENST00000576940 ARL15Q9NXU5 204 aa9.34□□□□□ -0.91
NPLOC4-220ENST00000576940 FBXO5Q9UKT4 447 aa9.34□□□□□ -0.91
NPLOC4-220ENST00000576940 ATG4BQ9Y4P1 393 aa9.34□□□□□ -0.91
NPLOC4-220ENST00000576940 COMMD10Q9Y6G5 202 aa9.34□□□□□ -0.91
NPLOC4-220ENST00000576940 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.34□□□□□ -0.91
NPLOC4-220ENST00000576940 FBN1P35555 2871 aaKnown RBP9.33□□□□□ -0.92
NPLOC4-220ENST00000576940 A0A1W2PPR1 153 aa9.33□□□□□ -0.92
NPLOC4-220ENST00000576940 MAGEB16A2A368 324 aa9.33□□□□□ -0.92
NPLOC4-220ENST00000576940 FAM47E-STBD1D6RA91 191 aa9.33□□□□□ -0.92
NPLOC4-220ENST00000576940 CLDN4O14493 209 aa9.33□□□□□ -0.92
NPLOC4-220ENST00000576940 DVL2O14641 736 aa9.33□□□□□ -0.92
NPLOC4-220ENST00000576940 NRDCO43847 1150 aa9.33□□□□□ -0.92
NPLOC4-220ENST00000576940 HCN1O60741 890 aa9.33□□□□□ -0.92
NPLOC4-220ENST00000576940 SERPINA6P08185 405 aa9.33□□□□□ -0.92
NPLOC4-220ENST00000576940 TNNI3P19429 210 aa9.33□□□□□ -0.92
NPLOC4-220ENST00000576940 SAT1P21673 171 aa9.33□□□□□ -0.92
NPLOC4-220ENST00000576940 CEACAM8P31997 349 aaPredicted RBP9.33□□□□□ -0.92
NPLOC4-220ENST00000576940 TRPC1P48995 793 aa9.33□□□□□ -0.92
NPLOC4-220ENST00000576940 VPS41P49754 854 aa9.33□□□□□ -0.92
NPLOC4-220ENST00000576940 RGS4P49798 205 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms