RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 HRH2P25021 359 aa12.61□□□□□ -0.39
PCDHGB3-201ENST00000576222 ARFIP1P53367 373 aa12.61□□□□□ -0.39
PCDHGB3-201ENST00000576222 SP140Q13342 867 aa12.61□□□□□ -0.39
PCDHGB3-201ENST00000576222 PTGES3Q15185 160 aaKnown RBP12.61□□□□□ -0.39
PCDHGB3-201ENST00000576222 SWI5Q1ZZU3 235 aa12.61□□□□□ -0.39
PCDHGB3-201ENST00000576222 SLC25A25Q6KCM7 469 aa12.61□□□□□ -0.39
PCDHGB3-201ENST00000576222 TPRG1Q6ZUI0 275 aa12.61□□□□□ -0.39
PCDHGB3-201ENST00000576222 NUDT13Q86X67 352 aa12.61□□□□□ -0.39
PCDHGB3-201ENST00000576222 DNMT3AQ9Y6K1 912 aaPredicted RBP12.61□□□□□ -0.39
PCDHGB3-201ENST00000576222 ADAP00813 363 aa12.61□□□□□ -0.39
PCDHGB3-201ENST00000576222 H2AFB2P0C5Z0 115 aa12.61□□□□□ -0.39
PCDHGB3-201ENST00000576222 EIF2DP41214 584 aaKnown RBP12.61□□□□□ -0.39
PCDHGB3-201ENST00000576222 RPS5P46782 204 aaKnown RBP12.61□□□□□ -0.39
PCDHGB3-201ENST00000576222 MLLT10P55197 1068 aa12.61□□□□□ -0.39
PCDHGB3-201ENST00000576222 SREBF2Q12772 1141 aa12.61□□□□□ -0.39
PCDHGB3-201ENST00000576222 VEZF1Q14119 521 aa12.61□□□□□ -0.39
PCDHGB3-201ENST00000576222 SF1Q15637 639 aaKnown RBP12.61□□□□□ -0.39
PCDHGB3-201ENST00000576222 BCL2L15Q5TBC7 163 aa12.61□□□□□ -0.39
PCDHGB3-201ENST00000576222 PGBD3Q8N328 593 aa12.61□□□□□ -0.39
PCDHGB3-201ENST00000576222 TMIEQ8NEW7 156 aa12.61□□□□□ -0.39
PCDHGB3-201ENST00000576222 OR51G2Q8NGK0 314 aa12.61□□□□□ -0.39
PCDHGB3-201ENST00000576222 KHSRPQ92945 711 aaKnown RBP eCLIP12.61□□□□□ -0.39
PCDHGB3-201ENST00000576222 TAS2R10Q9NYW0 307 aa12.61□□□□□ -0.39
PCDHGB3-201ENST00000576222 SLC16A6O15403 523 aa12.6□□□□□ -0.39
PCDHGB3-201ENST00000576222 PRKYO43930 277 aa12.6□□□□□ -0.39
PCDHGB3-201ENST00000576222 RFPL3O75679 317 aa12.6□□□□□ -0.39
PCDHGB3-201ENST00000576222 SNAPC5O75971 98 aa12.6□□□□□ -0.39
PCDHGB3-201ENST00000576222 JUPP14923 745 aa12.6□□□□□ -0.39
PCDHGB3-201ENST00000576222 BDKRB1P46663 353 aa12.6□□□□□ -0.39
PCDHGB3-201ENST00000576222 INHBEP58166 350 aa12.6□□□□□ -0.39
PCDHGB3-201ENST00000576222 SNTB2Q13425 540 aaKnown RBP12.6□□□□□ -0.39
PCDHGB3-201ENST00000576222 SLC9A5Q14940 896 aa12.6□□□□□ -0.39
PCDHGB3-201ENST00000576222 ZNF782Q6ZMW2 699 aaPredicted RBP12.6□□□□□ -0.39
PCDHGB3-201ENST00000576222 SERPINA11Q86U17 422 aa12.6□□□□□ -0.39
PCDHGB3-201ENST00000576222 TSEN15Q8WW01 171 aaKnown RBP12.6□□□□□ -0.39
PCDHGB3-201ENST00000576222 SECISBP2Q96T21 854 aaKnown RBP12.6□□□□□ -0.39
PCDHGB3-201ENST00000576222 WRAP53Q9BUR4 548 aaKnown RBP12.6□□□□□ -0.39
PCDHGB3-201ENST00000576222 ASAH2Q9NR71 780 aa12.6□□□□□ -0.39
PCDHGB3-201ENST00000576222 NPAP1Q9NZP6 1156 aa12.6□□□□□ -0.39
PCDHGB3-201ENST00000576222 ENPP4Q9Y6X5 453 aa12.6□□□□□ -0.39
PCDHGB3-201ENST00000576222 KIF13AQ9H1H9 1805 aa12.6□□□□□ -0.39
PCDHGB3-201ENST00000576222 OR2AT4A6NND4 320 aa12.6□□□□□ -0.39
PCDHGB3-201ENST00000576222 RP2O75695 350 aa12.6□□□□□ -0.39
PCDHGB3-201ENST00000576222 APOC3P02656 99 aa12.6□□□□□ -0.39
PCDHGB3-201ENST00000576222 TIA1P31483 386 aaKnown RBP eCLIP12.6□□□□□ -0.39
PCDHGB3-201ENST00000576222 PSMD8P48556 350 aa12.6□□□□□ -0.39
PCDHGB3-201ENST00000576222 GPR19Q15760 415 aa12.6□□□□□ -0.39
PCDHGB3-201ENST00000576222 INAVAQ3KP66 663 aa12.6□□□□□ -0.39
PCDHGB3-201ENST00000576222 CNIH2Q6PI25 160 aa12.6□□□□□ -0.39
PCDHGB3-201ENST00000576222 YIPF7Q8N8F6 280 aa12.6□□□□□ -0.39
PCDHGB3-201ENST00000576222 APIPQ96GX9 242 aa12.6□□□□□ -0.39
PCDHGB3-201ENST00000576222 CKLFQ9UBR5 152 aa12.6□□□□□ -0.39
PCDHGB3-201ENST00000576222 PCDHGB2Q9Y5G2 931 aa12.6□□□□□ -0.39
PCDHGB3-201ENST00000576222 SPO11Q9Y5K1 396 aa12.6□□□□□ -0.39
PCDHGB3-201ENST00000576222 MYO10Q9HD67 2058 aa12.6□□□□□ -0.39
PCDHGB3-201ENST00000576222 A0A0X1KG70 313 aa12.6□□□□□ -0.39
PCDHGB3-201ENST00000576222 SELENOWP63302 87 aa12.6□□□□□ -0.39
PCDHGB3-201ENST00000576222 MLLT1Q03111 559 aaPredicted RBP12.6□□□□□ -0.39
PCDHGB3-201ENST00000576222 TATDN3Q17R31 274 aa12.6□□□□□ -0.39
PCDHGB3-201ENST00000576222 GPRC6AQ5T6X5 926 aa12.6□□□□□ -0.39
PCDHGB3-201ENST00000576222 GALNT7Q86SF2 657 aa12.6□□□□□ -0.39
PCDHGB3-201ENST00000576222 OR4K3Q96R72 315 aa12.6□□□□□ -0.39
PCDHGB3-201ENST00000576222 RC3H2Q9HBD1 1191 aaKnown RBP12.6□□□□□ -0.39
PCDHGB3-201ENST00000576222 COL14A1Q05707 1796 aaKnown RBP12.6□□□□□ -0.39
PCDHGB3-201ENST00000576222 METTL15A6NJ78 407 aa12.6□□□□□ -0.39
PCDHGB3-201ENST00000576222 CD8B2A6NJW9 211 aa12.6□□□□□ -0.39
PCDHGB3-201ENST00000576222 KMOO15229 486 aa12.6□□□□□ -0.39
PCDHGB3-201ENST00000576222 PROM1O43490 865 aa12.6□□□□□ -0.39
PCDHGB3-201ENST00000576222 MT-ND5P03915 603 aa12.6□□□□□ -0.39
PCDHGB3-201ENST00000576222 CD8BP10966 210 aa12.6□□□□□ -0.39
PCDHGB3-201ENST00000576222 EMP3P54852 163 aa12.6□□□□□ -0.39
PCDHGB3-201ENST00000576222 ADAM8P78325 824 aa12.6□□□□□ -0.39
PCDHGB3-201ENST00000576222 TOR1AIP2Q8NFQ8 470 aa12.6□□□□□ -0.39
PCDHGB3-201ENST00000576222 OR2AP1Q8NGE2 309 aa12.6□□□□□ -0.39
PCDHGB3-201ENST00000576222 CCDC107Q8WV48 283 aa12.6□□□□□ -0.39
PCDHGB3-201ENST00000576222 OSTF1Q92882 214 aa12.6□□□□□ -0.39
PCDHGB3-201ENST00000576222 GPR78Q96P69 363 aa12.6□□□□□ -0.39
PCDHGB3-201ENST00000576222 ACTR6Q9GZN1 396 aa12.6□□□□□ -0.39
PCDHGB3-201ENST00000576222 ITGA10O75578 1167 aa12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 RPL17P18621 184 aaKnown RBP12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 UQCRC2P22695 453 aa12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 UGT2B10P36537 528 aa12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 DAPP51397 102 aa12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 UAP1L1Q3KQV9 507 aa12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 JAZF1Q86VZ6 243 aa12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 NAGSQ8N159 534 aa12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 OR6K6Q8NGW6 343 aa12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 C15orf40Q8WUR7 153 aa12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 ZNF558Q96NG5 402 aa12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 ZNF300Q96RE9 604 aaPredicted RBP12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 PCDHGB7Q9Y5F8 929 aa12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 CDH10Q9Y6N8 788 aa12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 TNFRSF10AO00220 468 aa12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 FLRT2O43155 660 aa12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 OSMP13725 252 aa12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 ZXDBP98169 803 aa12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 CDK10Q15131 360 aa12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 LRRC26Q2I0M4 334 aa12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 FAM214AQ32MH5 1076 aa12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 FAM46CQ5VWP2 391 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms