RNA–Protein interactions for RNA: ENST00000575507.1

EDC4-210, Transcript of enhancer of mRNA decapping 4, human

TSL 2

Gene EDC4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EDC4-210	ENST00000575507	NPL	Q9BXD5	320 aa	Predicted RBP	13.26	□□□□□ -0.29
EDC4-210	ENST00000575507	MS4A8	Q9BY19	250 aa		13.26	□□□□□ -0.29
EDC4-210	ENST00000575507	VPS11	Q9H270	941 aa		13.26	□□□□□ -0.29
EDC4-210	ENST00000575507	OPTC	Q9UBM4	332 aa		13.26	□□□□□ -0.29
EDC4-210	ENST00000575507	ZNF223	Q9UK11	482 aa	Predicted RBP	13.26	□□□□□ -0.29
EDC4-210	ENST00000575507	DAPP1	Q9UN19	280 aa		13.26	□□□□□ -0.29
EDC4-210	ENST00000575507	FLNB	O75369	2602 aa	Known RBP	13.26	□□□□□ -0.29
EDC4-210	ENST00000575507	NBAS	A2RRP1	2371 aa		13.25	□□□□□ -0.29
EDC4-210	ENST00000575507	SAGE2P	A6NJ88	616 aa		13.25	□□□□□ -0.29
EDC4-210	ENST00000575507	PSMD12	O00232	456 aa	Predicted RBP	13.25	□□□□□ -0.29
EDC4-210	ENST00000575507	SAP18	O00422	153 aa	Known RBP	13.25	□□□□□ -0.29
EDC4-210	ENST00000575507	PRAMEF2	O60811	474 aa		13.25	□□□□□ -0.29
EDC4-210	ENST00000575507	SNRPA	P09012	282 aa	Known RBP	13.25	□□□□□ -0.29
EDC4-210	ENST00000575507	GPR143	P51810	404 aa		13.25	□□□□□ -0.29
EDC4-210	ENST00000575507	TDGF1P3	P51864	188 aa		13.25	□□□□□ -0.29
EDC4-210	ENST00000575507	MTTP	P55157	894 aa		13.25	□□□□□ -0.29
EDC4-210	ENST00000575507	RAB38	P57729	211 aa		13.25	□□□□□ -0.29
EDC4-210	ENST00000575507	AP2B1	P63010	937 aa		13.25	□□□□□ -0.29
EDC4-210	ENST00000575507	LAPTM5	Q13571	262 aa		13.25	□□□□□ -0.29
EDC4-210	ENST00000575507	MEP1A	Q16819	746 aa		13.25	□□□□□ -0.29
EDC4-210	ENST00000575507	FAM83E	Q2M2I3	478 aa		13.25	□□□□□ -0.29
EDC4-210	ENST00000575507	TECRL	Q5HYJ1	363 aa		13.25	□□□□□ -0.29
EDC4-210	ENST00000575507	FAM219B	Q5XKK7	198 aa		13.25	□□□□□ -0.29
EDC4-210	ENST00000575507	CCDC91	Q7Z6B0	441 aa		13.25	□□□□□ -0.29
EDC4-210	ENST00000575507	CLNK	Q7Z7G1	428 aa		13.25	□□□□□ -0.29
EDC4-210	ENST00000575507	APCDD1L	Q8NCL9	501 aa		13.25	□□□□□ -0.29
EDC4-210	ENST00000575507	OR2W6P	Q8NHA6	318 aa		13.25	□□□□□ -0.29
EDC4-210	ENST00000575507	ISL2	Q96A47	359 aa		13.25	□□□□□ -0.29
EDC4-210	ENST00000575507	PKNOX2	Q96KN3	472 aa		13.25	□□□□□ -0.29
EDC4-210	ENST00000575507	SERINC2	Q96SA4	455 aa		13.25	□□□□□ -0.29
EDC4-210	ENST00000575507	MAPKAP1	Q9BPZ7	522 aa		13.25	□□□□□ -0.29
EDC4-210	ENST00000575507	OR51B5	Q9H339	312 aa		13.25	□□□□□ -0.29
EDC4-210	ENST00000575507	VIPAS39	Q9H9C1	493 aa		13.25	□□□□□ -0.29
EDC4-210	ENST00000575507	PRTFDC1	Q9NRG1	225 aa		13.25	□□□□□ -0.29
EDC4-210	ENST00000575507	GABRR3	A8MPY1	467 aa		13.24	□□□□□ -0.29
EDC4-210	ENST00000575507	B3GALT2	O43825	422 aa		13.24	□□□□□ -0.29
EDC4-210	ENST00000575507	PRKN	O60260	465 aa	Predicted RBP	13.24	□□□□□ -0.29
EDC4-210	ENST00000575507	NEURL1	O76050	574 aa		13.24	□□□□□ -0.29
EDC4-210	ENST00000575507	LDLR	P01130	860 aa		13.24	□□□□□ -0.29
EDC4-210	ENST00000575507	SBK3	P0C264	359 aa		13.24	□□□□□ -0.29
EDC4-210	ENST00000575507	PCNA	P12004	261 aa		13.24	□□□□□ -0.29
EDC4-210	ENST00000575507	GP1BB	P13224	206 aa		13.24	□□□□□ -0.29
EDC4-210	ENST00000575507	EPB42	P16452	691 aa		13.24	□□□□□ -0.29
EDC4-210	ENST00000575507	ATP5A1	P25705	553 aa	Known RBP	13.24	□□□□□ -0.29
EDC4-210	ENST00000575507	SERPINB8	P50452	374 aa		13.24	□□□□□ -0.29
EDC4-210	ENST00000575507	ALDH18A1	P54886	795 aa	Known RBP	13.24	□□□□□ -0.29
EDC4-210	ENST00000575507	HSD17B7	P56937	341 aa		13.24	□□□□□ -0.29
EDC4-210	ENST00000575507	PCBP2	Q15366	365 aa	Known RBP eCLIP	13.24	□□□□□ -0.29
EDC4-210	ENST00000575507	HIST2H2AC	Q16777	129 aa	Predicted RBP	13.24	□□□□□ -0.29
EDC4-210	ENST00000575507	ZNF766	Q5HY98	468 aa		13.24	□□□□□ -0.29
EDC4-210	ENST00000575507	PAGE2B	Q5JRK9	111 aa		13.24	□□□□□ -0.29
EDC4-210	ENST00000575507	HIST2H2AA3	Q6FI13	130 aa		13.24	□□□□□ -0.29
EDC4-210	ENST00000575507	GRHL2	Q6ISB3	625 aa		13.24	□□□□□ -0.29
EDC4-210	ENST00000575507	MED27	Q6P2C8	311 aa		13.24	□□□□□ -0.29
EDC4-210	ENST00000575507	TRIM40	Q6P9F5	258 aa		13.24	□□□□□ -0.29
EDC4-210	ENST00000575507	FAM180A	Q6UWF9	173 aa		13.24	□□□□□ -0.29
EDC4-210	ENST00000575507	RPS19BP1	Q86WX3	136 aa	Known RBP	13.24	□□□□□ -0.29
EDC4-210	ENST00000575507	TMEM151A	Q8N4L1	468 aa		13.24	□□□□□ -0.29
EDC4-210	ENST00000575507	BCORP1	Q8N888	145 aa		13.24	□□□□□ -0.29
EDC4-210	ENST00000575507	ACOT4	Q8N9L9	421 aa		13.24	□□□□□ -0.29
EDC4-210	ENST00000575507	EPS8L3	Q8TE67	593 aa	Known RBP	13.24	□□□□□ -0.29
EDC4-210	ENST00000575507	ZIM3	Q96PE6	472 aa		13.24	□□□□□ -0.29
EDC4-210	ENST00000575507	PNO1	Q9NRX1	252 aa	Known RBP	13.24	□□□□□ -0.29
EDC4-210	ENST00000575507	OLAH	Q9NV23	265 aa		13.24	□□□□□ -0.29
EDC4-210	ENST00000575507	TEKT2	Q9UIF3	430 aa		13.24	□□□□□ -0.29
EDC4-210	ENST00000575507	OSGIN2	Q9Y236	505 aa		13.24	□□□□□ -0.29
EDC4-210	ENST00000575507	RNF11	Q9Y3C5	154 aa		13.24	□□□□□ -0.29
EDC4-210	ENST00000575507	MMACHC	Q9Y4U1	282 aa		13.24	□□□□□ -0.29
EDC4-210	ENST00000575507	COL12A1	Q99715	3063 aa		13.24	□□□□□ -0.29
EDC4-210	ENST00000575507	HECTD1	Q9ULT8	2610 aa		13.23	□□□□□ -0.29
EDC4-210	ENST00000575507	WASHC1	A8K0Z3	465 aa		13.23	□□□□□ -0.29
EDC4-210	ENST00000575507	SYCE1L	A8MT33	242 aa		13.23	□□□□□ -0.29
EDC4-210	ENST00000575507	TRIM49D1	C9J1S8	452 aa		13.23	□□□□□ -0.29
EDC4-210	ENST00000575507	DYNC1I1	O14576	645 aa		13.23	□□□□□ -0.29
EDC4-210	ENST00000575507	MYO1D	O94832	1006 aa		13.23	□□□□□ -0.29
EDC4-210	ENST00000575507	RASAL1	O95294	804 aa		13.23	□□□□□ -0.29
EDC4-210	ENST00000575507	GFAP	P14136	432 aa		13.23	□□□□□ -0.29
EDC4-210	ENST00000575507	EDN3	P14138	238 aa		13.23	□□□□□ -0.29
EDC4-210	ENST00000575507	TPP2	P29144	1249 aa	Predicted RBP	13.23	□□□□□ -0.29
EDC4-210	ENST00000575507	SLCO1A2	P46721	670 aa		13.23	□□□□□ -0.29
EDC4-210	ENST00000575507	NEK2	P51955	445 aa		13.23	□□□□□ -0.29
EDC4-210	ENST00000575507	KCNK10	P57789	538 aa		13.23	□□□□□ -0.29
EDC4-210	ENST00000575507	MLF1	P58340	268 aa		13.23	□□□□□ -0.29
EDC4-210	ENST00000575507	ZNF844	Q08AG5	666 aa		13.23	□□□□□ -0.29
EDC4-210	ENST00000575507	OR1C1	Q15619	314 aa		13.23	□□□□□ -0.29
EDC4-210	ENST00000575507	KRT71	Q3SY84	523 aa		13.23	□□□□□ -0.29
EDC4-210	ENST00000575507	DEPDC1	Q5TB30	811 aa		13.23	□□□□□ -0.29
EDC4-210	ENST00000575507	TIFAB	Q6ZNK6	161 aa		13.23	□□□□□ -0.29
EDC4-210	ENST00000575507	C16orf47	Q6ZP98	133 aa	Predicted RBP	13.23	□□□□□ -0.29
EDC4-210	ENST00000575507	RPS27L	Q71UM5	84 aa	Known RBP	13.23	□□□□□ -0.29
EDC4-210	ENST00000575507	GOLGA7	Q7Z5G4	137 aa		13.23	□□□□□ -0.29
EDC4-210	ENST00000575507	ARMC10	Q8N2F6	343 aa		13.23	□□□□□ -0.29
EDC4-210	ENST00000575507	HUS1B	Q8NHY5	278 aa		13.23	□□□□□ -0.29
EDC4-210	ENST00000575507	THAP3	Q8WTV1	239 aa	Predicted RBP	13.23	□□□□□ -0.29
EDC4-210	ENST00000575507	NR4A3	Q92570	626 aa		13.23	□□□□□ -0.29
EDC4-210	ENST00000575507	MTERF1	Q99551	399 aa	Known RBP	13.23	□□□□□ -0.29
EDC4-210	ENST00000575507	TBCD	Q9BTW9	1192 aa		13.23	□□□□□ -0.29
EDC4-210	ENST00000575507	IPPK	Q9H8X2	491 aa		13.23	□□□□□ -0.29
EDC4-210	ENST00000575507	KLHL1	Q9NR64	748 aa		13.23	□□□□□ -0.29
EDC4-210	ENST00000575507	CPSF2	Q9P2I0	782 aa	Known RBP	13.23	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms