RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 EXOSC8Q96B26 276 aaKnown RBP22.54■■□□□ 1.2
NPLOC4-217ENST00000574897 GABRG3Q99928 467 aa22.54■■□□□ 1.2
NPLOC4-217ENST00000574897 EPS8L2Q9H6S3 715 aa22.54■■□□□ 1.2
NPLOC4-217ENST00000574897 KLHL20Q9Y2M5 609 aa22.54■■□□□ 1.2
NPLOC4-217ENST00000574897 PTGES3LE9PB15 166 aa22.53■■□□□ 1.2
NPLOC4-217ENST00000574897 H0Y8X5 98 aa22.53■■□□□ 1.2
NPLOC4-217ENST00000574897 SLC1A7O00341 560 aa22.53■■□□□ 1.2
NPLOC4-217ENST00000574897 PRDX1Q06830 199 aaKnown RBP22.53■■□□□ 1.2
NPLOC4-217ENST00000574897 HSPB3Q12988 150 aa22.53■■□□□ 1.2
NPLOC4-217ENST00000574897 TRIM40Q6P9F5 258 aa22.53■■□□□ 1.2
NPLOC4-217ENST00000574897 TEFMQ96QE5 360 aaKnown RBP22.53■■□□□ 1.2
NPLOC4-217ENST00000574897 DCUN1D5Q9BTE7 237 aa22.53■■□□□ 1.2
NPLOC4-217ENST00000574897 KLHL31Q9H511 634 aa22.53■■□□□ 1.2
NPLOC4-217ENST00000574897 SYNPO2LQ9H987 977 aa22.53■■□□□ 1.2
NPLOC4-217ENST00000574897 KIF17Q9P2E2 1029 aa22.53■■□□□ 1.2
NPLOC4-217ENST00000574897 ARHGEF17Q96PE2 2063 aaPredicted RBP22.53■■□□□ 1.2
NPLOC4-217ENST00000574897 PRR19A6NJB7 356 aa22.53■■□□□ 1.2
NPLOC4-217ENST00000574897 C4orf51C9J302 202 aa22.53■■□□□ 1.2
NPLOC4-217ENST00000574897 PRKRAO75569 313 aaKnown RBP22.53■■□□□ 1.2
NPLOC4-217ENST00000574897 ATE1O95260 518 aa22.53■■□□□ 1.2
NPLOC4-217ENST00000574897 CPNE6O95741 557 aa22.53■■□□□ 1.2
NPLOC4-217ENST00000574897 EML2O95834 649 aa22.53■■□□□ 1.2
NPLOC4-217ENST00000574897 PKLRP30613 574 aa22.53■■□□□ 1.2
NPLOC4-217ENST00000574897 CTHP32929 405 aa22.53■■□□□ 1.2
NPLOC4-217ENST00000574897 FADDQ13158 208 aa22.53■■□□□ 1.2
NPLOC4-217ENST00000574897 CDK5R2Q13319 367 aa22.53■■□□□ 1.2
NPLOC4-217ENST00000574897 C17orf62Q9BQA9 187 aa22.53■■□□□ 1.2
NPLOC4-217ENST00000574897 SPHK1Q9NYA1 384 aa22.53■■□□□ 1.2
NPLOC4-217ENST00000574897 PNMA8BQ9ULN7 279 aaPredicted RBP22.53■■□□□ 1.2
NPLOC4-217ENST00000574897 PADI2Q9Y2J8 665 aa22.53■■□□□ 1.2
NPLOC4-217ENST00000574897 FANCMQ8IYD8 2048 aa22.53■■□□□ 1.2
NPLOC4-217ENST00000574897 A0A1B0GVG6 124 aa22.52■■□□□ 1.2
NPLOC4-217ENST00000574897 B4GALT2O60909 372 aa22.52■■□□□ 1.2
NPLOC4-217ENST00000574897 ABCB7O75027 752 aa22.52■■□□□ 1.2
NPLOC4-217ENST00000574897 MATN1P21941 496 aa22.52■■□□□ 1.2
NPLOC4-217ENST00000574897 FMO3P31513 532 aa22.52■■□□□ 1.2
NPLOC4-217ENST00000574897 FOXD4Q12950 439 aaPredicted RBP22.52■■□□□ 1.2
NPLOC4-217ENST00000574897 TNFAIP8L2Q6P589 184 aaPredicted RBP22.52■■□□□ 1.2
NPLOC4-217ENST00000574897 ERI1Q8IV48 349 aaKnown RBP22.52■■□□□ 1.2
NPLOC4-217ENST00000574897 SPARTQ8N0X7 666 aa22.52■■□□□ 1.2
NPLOC4-217ENST00000574897 FBXL6Q8N531 539 aa22.52■■□□□ 1.2
NPLOC4-217ENST00000574897 OR52J3Q8NH60 311 aa22.52■■□□□ 1.2
NPLOC4-217ENST00000574897 UBE2FQ969M7 185 aa22.52■■□□□ 1.2
NPLOC4-217ENST00000574897 FAM131CQ96AQ9 280 aa22.52■■□□□ 1.2
NPLOC4-217ENST00000574897 TMEM38AQ9H6F2 299 aa22.52■■□□□ 1.2
NPLOC4-217ENST00000574897 SLC6A20Q9NP91 592 aa22.52■■□□□ 1.2
NPLOC4-217ENST00000574897 KRT84Q9NSB2 600 aa22.52■■□□□ 1.2
NPLOC4-217ENST00000574897 J3KTA2 159 aa22.52■■□□□ 1.19
NPLOC4-217ENST00000574897 C9P02748 559 aa22.52■■□□□ 1.19
NPLOC4-217ENST00000574897 PEBP1P30086 187 aaKnown RBP22.52■■□□□ 1.19
NPLOC4-217ENST00000574897 PTGER1P34995 402 aa22.52■■□□□ 1.19
NPLOC4-217ENST00000574897 MANFP55145 182 aaKnown RBP22.52■■□□□ 1.19
NPLOC4-217ENST00000574897 RPS26P11Q5JNZ5 115 aaPredicted RBP22.52■■□□□ 1.19
NPLOC4-217ENST00000574897 TPRG1LQ5T0D9 272 aa22.52■■□□□ 1.19
NPLOC4-217ENST00000574897 ZNF793Q6ZN11 406 aa22.52■■□□□ 1.19
NPLOC4-217ENST00000574897 NUDT13Q86X67 352 aa22.52■■□□□ 1.19
NPLOC4-217ENST00000574897 TTC29Q8NA56 475 aaPredicted RBP22.52■■□□□ 1.19
NPLOC4-217ENST00000574897 CREB3L4Q8TEY5 395 aa22.52■■□□□ 1.19
NPLOC4-217ENST00000574897 PRAMEF10O60809 474 aa22.51■■□□□ 1.19
NPLOC4-217ENST00000574897 UQCRC2P22695 453 aa22.51■■□□□ 1.19
NPLOC4-217ENST00000574897 BCL6P41182 706 aa22.51■■□□□ 1.19
NPLOC4-217ENST00000574897 TFF2Q03403 129 aa22.51■■□□□ 1.19
NPLOC4-217ENST00000574897 SKIV2LQ15477 1246 aaKnown RBP22.51■■□□□ 1.19
NPLOC4-217ENST00000574897 PAGE2Q7Z2X7 111 aa22.51■■□□□ 1.19
NPLOC4-217ENST00000574897 HORMAD2Q8N7B1 307 aa22.51■■□□□ 1.19
NPLOC4-217ENST00000574897 RGMAQ96B86 450 aa22.51■■□□□ 1.19
NPLOC4-217ENST00000574897 PDXPQ96GD0 296 aa22.51■■□□□ 1.19
NPLOC4-217ENST00000574897 RHNO1Q9BSD3 238 aa22.51■■□□□ 1.19
NPLOC4-217ENST00000574897 LHPPQ9H008 270 aa22.51■■□□□ 1.19
NPLOC4-217ENST00000574897 H3BMQ9 156 aa22.5■■□□□ 1.19
NPLOC4-217ENST00000574897 PDPK1O15530 556 aa22.5■■□□□ 1.19
NPLOC4-217ENST00000574897 ARAFP10398 606 aa22.5■■□□□ 1.19
NPLOC4-217ENST00000574897 RYKP34925 604 aa22.5■■□□□ 1.19
NPLOC4-217ENST00000574897 RPE65Q16518 533 aa22.5■■□□□ 1.19
NPLOC4-217ENST00000574897 UAP1L1Q3KQV9 507 aa22.5■■□□□ 1.19
NPLOC4-217ENST00000574897 SDE2Q6IQ49 451 aa22.5■■□□□ 1.19
NPLOC4-217ENST00000574897 Q6ZPB1 254 aaPredicted RBP22.5■■□□□ 1.19
NPLOC4-217ENST00000574897 SLC44A2Q8IWA5 706 aaPredicted RBP22.5■■□□□ 1.19
NPLOC4-217ENST00000574897 RAB42Q8N4Z0 105 aa22.5■■□□□ 1.19
NPLOC4-217ENST00000574897 OR2L8Q8NGY9 312 aa22.5■■□□□ 1.19
NPLOC4-217ENST00000574897 COG8Q96MW5 612 aa22.5■■□□□ 1.19
NPLOC4-217ENST00000574897 NLNQ9BYT8 704 aa22.5■■□□□ 1.19
NPLOC4-217ENST00000574897 RAB23Q9ULC3 237 aa22.5■■□□□ 1.19
NPLOC4-217ENST00000574897 LYVE1Q9Y5Y7 322 aa22.5■■□□□ 1.19
NPLOC4-217ENST00000574897 SCN2AQ99250 2005 aa22.5■■□□□ 1.19
NPLOC4-217ENST00000574897 JRKO75564 520 aa22.5■■□□□ 1.19
NPLOC4-217ENST00000574897 AK4P27144 223 aaPredicted RBP22.5■■□□□ 1.19
NPLOC4-217ENST00000574897 DSTNP60981 165 aa22.5■■□□□ 1.19
NPLOC4-217ENST00000574897 RBBP4Q09028 425 aa22.5■■□□□ 1.19
NPLOC4-217ENST00000574897 DYNC1I2Q13409 638 aaKnown RBP22.5■■□□□ 1.19
NPLOC4-217ENST00000574897 RAB30Q15771 203 aa22.5■■□□□ 1.19
NPLOC4-217ENST00000574897 FAHD1Q6P587 224 aa22.5■■□□□ 1.19
NPLOC4-217ENST00000574897 CEACAM20Q6UY09 585 aa22.5■■□□□ 1.19
NPLOC4-217ENST00000574897 RD3Q7Z3Z2 195 aa22.5■■□□□ 1.19
NPLOC4-217ENST00000574897 CCDC71Q8IV32 467 aaPredicted RBP22.5■■□□□ 1.19
NPLOC4-217ENST00000574897 OR13F1Q8NGS4 319 aa22.5■■□□□ 1.19
NPLOC4-217ENST00000574897 FBLIM1Q8WUP2 373 aa22.5■■□□□ 1.19
NPLOC4-217ENST00000574897 RAB8BQ92930 207 aa22.5■■□□□ 1.19
NPLOC4-217ENST00000574897 NT5DC2Q9H857 520 aa22.5■■□□□ 1.19
NPLOC4-217ENST00000574897 SIRT3Q9NTG7 399 aaPredicted RBP22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms