RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 LYARQ9NX58 379 aaKnown RBP22.76■■□□□ 1.23
ATPAF1-213ENST00000574428 RARRES3Q9UL19 164 aa22.76■■□□□ 1.23
ATPAF1-213ENST00000574428 A0A1W2PR48 441 aa22.75■■□□□ 1.23
ATPAF1-213ENST00000574428 FBP2O00757 339 aa22.75■■□□□ 1.23
ATPAF1-213ENST00000574428 ZNF749O43361 778 aa22.75■■□□□ 1.23
ATPAF1-213ENST00000574428 FURINP09958 794 aa22.75■■□□□ 1.23
ATPAF1-213ENST00000574428 GSTM5P46439 218 aa22.75■■□□□ 1.23
ATPAF1-213ENST00000574428 ALDH9A1P49189 494 aa22.75■■□□□ 1.23
ATPAF1-213ENST00000574428 UCN3Q969E3 161 aa22.75■■□□□ 1.23
ATPAF1-213ENST00000574428 RCN3Q96D15 328 aa22.75■■□□□ 1.23
ATPAF1-213ENST00000574428 NPAS2Q99743 824 aa22.75■■□□□ 1.23
ATPAF1-213ENST00000574428 NDC1Q9BTX1 674 aa22.75■■□□□ 1.23
ATPAF1-213ENST00000574428 TUBB6Q9BUF5 446 aa22.75■■□□□ 1.23
ATPAF1-213ENST00000574428 APMAPQ9HDC9 416 aa22.75■■□□□ 1.23
ATPAF1-213ENST00000574428 DHCR7Q9UBM7 475 aaKnown RBP22.75■■□□□ 1.23
ATPAF1-213ENST00000574428 ASPDHA6ND91 283 aa22.74■■□□□ 1.23
ATPAF1-213ENST00000574428 GABRR3A8MPY1 467 aa22.74■■□□□ 1.23
ATPAF1-213ENST00000574428 TIAF1O95411 115 aa22.74■■□□□ 1.23
ATPAF1-213ENST00000574428 PIM1P11309 404 aaPredicted RBP22.74■■□□□ 1.23
ATPAF1-213ENST00000574428 CCL4P13236 92 aa22.74■■□□□ 1.23
ATPAF1-213ENST00000574428 GCGRP47871 477 aa22.74■■□□□ 1.23
ATPAF1-213ENST00000574428 LIM2P55344 173 aa22.74■■□□□ 1.23
ATPAF1-213ENST00000574428 FAM214AQ32MH5 1076 aa22.74■■□□□ 1.23
ATPAF1-213ENST00000574428 C18orf63Q68DL7 685 aa22.74■■□□□ 1.23
ATPAF1-213ENST00000574428 BMPERQ8N8U9 685 aa22.74■■□□□ 1.23
ATPAF1-213ENST00000574428 FBXO27Q8NI29 283 aa22.74■■□□□ 1.23
ATPAF1-213ENST00000574428 NETO1Q8TDF5 533 aa22.74■■□□□ 1.23
ATPAF1-213ENST00000574428 MIEF1Q9NQG6 463 aa22.74■■□□□ 1.23
ATPAF1-213ENST00000574428 KCMF1Q9P0J7 381 aa22.74■■□□□ 1.23
ATPAF1-213ENST00000574428 NDOR1Q9UHB4 597 aa22.74■■□□□ 1.23
ATPAF1-213ENST00000574428 WBP11Q9Y2W2 641 aaKnown RBP22.74■■□□□ 1.23
ATPAF1-213ENST00000574428 GVINP1Q7Z2Y8 2422 aa22.74■■□□□ 1.23
ATPAF1-213ENST00000574428 ANGPT2O15123 496 aa22.73■■□□□ 1.23
ATPAF1-213ENST00000574428 HNRNPCL1O60812 293 aaKnown RBP22.73■■□□□ 1.23
ATPAF1-213ENST00000574428 AIFM1O95831 613 aa22.73■■□□□ 1.23
ATPAF1-213ENST00000574428 PGRP06401 933 aa22.73■■□□□ 1.23
ATPAF1-213ENST00000574428 ATXN8OSP0DMR3 200 aa22.73■■□□□ 1.23
ATPAF1-213ENST00000574428 LAMP1P11279 417 aa22.73■■□□□ 1.23
ATPAF1-213ENST00000574428 DDCP20711 480 aa22.73■■□□□ 1.23
ATPAF1-213ENST00000574428 ALAS2P22557 587 aa22.73■■□□□ 1.23
ATPAF1-213ENST00000574428 PDE7AQ13946 482 aa22.73■■□□□ 1.23
ATPAF1-213ENST00000574428 HEPACAMQ14CZ8 416 aa22.73■■□□□ 1.23
ATPAF1-213ENST00000574428 ISXQ2M1V0 245 aa22.73■■□□□ 1.23
ATPAF1-213ENST00000574428 FBXW10Q5XX13 1052 aa22.73■■□□□ 1.23
ATPAF1-213ENST00000574428 STARD8Q92502 1023 aa22.73■■□□□ 1.23
ATPAF1-213ENST00000574428 CTRCQ99895 268 aa22.73■■□□□ 1.23
ATPAF1-213ENST00000574428 SH3BP4Q9P0V3 963 aa22.73■■□□□ 1.23
ATPAF1-213ENST00000574428 HCN3Q9P1Z3 774 aa22.73■■□□□ 1.23
ATPAF1-213ENST00000574428 C5AR2Q9P296 337 aa22.73■■□□□ 1.23
ATPAF1-213ENST00000574428 ATP6V1HQ9UI12 483 aa22.73■■□□□ 1.23
ATPAF1-213ENST00000574428 DAPP1Q9UN19 280 aa22.73■■□□□ 1.23
ATPAF1-213ENST00000574428 A0A1W2PP18 115 aa22.73■■□□□ 1.23
ATPAF1-213ENST00000574428 GLOD5A6NK44 160 aa22.73■■□□□ 1.23
ATPAF1-213ENST00000574428 AIM2O14862 343 aa22.73■■□□□ 1.23
ATPAF1-213ENST00000574428 PROM1O43490 865 aa22.73■■□□□ 1.23
ATPAF1-213ENST00000574428 GFRA3O60609 400 aa22.73■■□□□ 1.23
ATPAF1-213ENST00000574428 GUCY1B2O75343 617 aa22.73■■□□□ 1.23
ATPAF1-213ENST00000574428 CSO75390 466 aaKnown RBP22.73■■□□□ 1.23
ATPAF1-213ENST00000574428 NSA2O95478 260 aaKnown RBP22.73■■□□□ 1.23
ATPAF1-213ENST00000574428 MT-CO3P00414 261 aa22.73■■□□□ 1.23
ATPAF1-213ENST00000574428 IL6P05231 212 aa22.73■■□□□ 1.23
ATPAF1-213ENST00000574428 FTH1P19P0C7X4 201 aa22.73■■□□□ 1.23
ATPAF1-213ENST00000574428 S100A3P33764 101 aa22.73■■□□□ 1.23
ATPAF1-213ENST00000574428 RASSF2P50749 326 aa22.73■■□□□ 1.23
ATPAF1-213ENST00000574428 PHC1P78364 1004 aa22.73■■□□□ 1.23
ATPAF1-213ENST00000574428 STX5Q13190 355 aa22.73■■□□□ 1.23
ATPAF1-213ENST00000574428 PRSS53Q2L4Q9 553 aa22.73■■□□□ 1.23
ATPAF1-213ENST00000574428 MMEL1Q495T6 779 aa22.73■■□□□ 1.23
ATPAF1-213ENST00000574428 ZNF385BQ569K4 471 aa22.73■■□□□ 1.23
ATPAF1-213ENST00000574428 CPTPQ5TA50 214 aa22.73■■□□□ 1.23
ATPAF1-213ENST00000574428 HES3Q5TGS1 186 aa22.73■■□□□ 1.23
ATPAF1-213ENST00000574428 REP15Q6BDI9 236 aa22.73■■□□□ 1.23
ATPAF1-213ENST00000574428 PWWP2BQ6NUJ5 590 aa22.73■■□□□ 1.23
ATPAF1-213ENST00000574428 RETREG3Q86VR2 466 aa22.73■■□□□ 1.23
ATPAF1-213ENST00000574428 TICAM1Q8IUC6 712 aa22.73■■□□□ 1.23
ATPAF1-213ENST00000574428 CA13Q8N1Q1 262 aa22.73■■□□□ 1.23
ATPAF1-213ENST00000574428 PPCDCQ96CD2 204 aa22.73■■□□□ 1.23
ATPAF1-213ENST00000574428 MMABQ96EY8 250 aaPredicted RBP22.73■■□□□ 1.23
ATPAF1-213ENST00000574428 CSF3RQ99062 836 aa22.73■■□□□ 1.23
ATPAF1-213ENST00000574428 FAIM2Q9BWQ8 316 aa22.73■■□□□ 1.23
ATPAF1-213ENST00000574428 STRADBQ9C0K7 418 aa22.73■■□□□ 1.23
ATPAF1-213ENST00000574428 LYRM4Q9HD34 91 aa22.73■■□□□ 1.23
ATPAF1-213ENST00000574428 PHF11Q9UIL8 331 aa22.73■■□□□ 1.23
ATPAF1-213ENST00000574428 MAPRE3Q9UPY8 281 aa22.73■■□□□ 1.23
ATPAF1-213ENST00000574428 NDUFAF1Q9Y375 327 aa22.73■■□□□ 1.23
ATPAF1-213ENST00000574428 DMXL1Q9Y485 3027 aa22.73■■□□□ 1.23
ATPAF1-213ENST00000574428 WASHC1A8K0Z3 465 aa22.72■■□□□ 1.23
ATPAF1-213ENST00000574428 KRT16P08779 473 aa22.72■■□□□ 1.23
ATPAF1-213ENST00000574428 KIR3DL1P43629 444 aa22.72■■□□□ 1.23
ATPAF1-213ENST00000574428 AVPR1BP47901 424 aa22.72■■□□□ 1.23
ATPAF1-213ENST00000574428 SKP1P63208 163 aa22.72■■□□□ 1.23
ATPAF1-213ENST00000574428 SIM1P81133 766 aaPredicted RBP22.72■■□□□ 1.23
ATPAF1-213ENST00000574428 OR4F3Q6IEY1 312 aa22.72■■□□□ 1.23
ATPAF1-213ENST00000574428 R3HCC1LQ7Z5L2 792 aaKnown RBP22.72■■□□□ 1.23
ATPAF1-213ENST00000574428 PPP1R3BQ86XI6 285 aa22.72■■□□□ 1.23
ATPAF1-213ENST00000574428 TMEM126BQ8IUX1 230 aa22.72■■□□□ 1.23
ATPAF1-213ENST00000574428 TSPEARQ8WU66 669 aa22.72■■□□□ 1.23
ATPAF1-213ENST00000574428 OR52E6Q96RD3 313 aa22.72■■□□□ 1.23
ATPAF1-213ENST00000574428 PRPF18Q99633 342 aaKnown RBP22.72■■□□□ 1.23
ATPAF1-213ENST00000574428 CMKLR1Q99788 373 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms