RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 IMMP1LQ96LU5 166 aa9.09□□□□□ -0.95
NPLOC4-216ENST00000574344 ZNF354BQ96LW1 612 aa9.09□□□□□ -0.95
NPLOC4-216ENST00000574344 PTCHD1Q96NR3 888 aa9.09□□□□□ -0.95
NPLOC4-216ENST00000574344 BARD1Q99728 777 aaKnown RBP9.09□□□□□ -0.95
NPLOC4-216ENST00000574344 SIKE1Q9BRV8 207 aa9.09□□□□□ -0.95
NPLOC4-216ENST00000574344 SARGQ9BW04 601 aa9.09□□□□□ -0.95
NPLOC4-216ENST00000574344 RNF32Q9H0A6 362 aa9.09□□□□□ -0.95
NPLOC4-216ENST00000574344 CAB39LQ9H9S4 337 aa9.09□□□□□ -0.95
NPLOC4-216ENST00000574344 POPDC3Q9HBV1 291 aa9.09□□□□□ -0.95
NPLOC4-216ENST00000574344 SMYD2Q9NRG4 433 aa9.09□□□□□ -0.95
NPLOC4-216ENST00000574344 STMN3Q9NZ72 180 aa9.09□□□□□ -0.95
NPLOC4-216ENST00000574344 SLC17A7Q9P2U7 560 aa9.09□□□□□ -0.95
NPLOC4-216ENST00000574344 MTO1Q9Y2Z2 717 aaKnown RBP9.09□□□□□ -0.95
NPLOC4-216ENST00000574344 CACNA1DQ01668 2161 aa9.09□□□□□ -0.95
NPLOC4-216ENST00000574344 DOPEY1Q5JWR5 2465 aa9.08□□□□□ -0.96
NPLOC4-216ENST00000574344 WDR91A4D1P6 747 aa9.08□□□□□ -0.96
NPLOC4-216ENST00000574344 CFAP73A6NFT4 308 aa9.08□□□□□ -0.96
NPLOC4-216ENST00000574344 MAGEB17A8MXT2 336 aa9.08□□□□□ -0.96
NPLOC4-216ENST00000574344 CLGNO14967 610 aa9.08□□□□□ -0.96
NPLOC4-216ENST00000574344 PHGDHO43175 533 aaKnown RBP9.08□□□□□ -0.96
NPLOC4-216ENST00000574344 LRRTM2O43300 516 aa9.08□□□□□ -0.96
NPLOC4-216ENST00000574344 CHST10O43529 356 aa9.08□□□□□ -0.96
NPLOC4-216ENST00000574344 PRMT3O60678 531 aa9.08□□□□□ -0.96
NPLOC4-216ENST00000574344 PRAMEF2O60811 474 aa9.08□□□□□ -0.96
NPLOC4-216ENST00000574344 HNRNPCL1O60812 293 aaKnown RBP9.08□□□□□ -0.96
NPLOC4-216ENST00000574344 ATP5HO75947 161 aa9.08□□□□□ -0.96
NPLOC4-216ENST00000574344 CRYABP02511 175 aaKnown RBP9.08□□□□□ -0.96
NPLOC4-216ENST00000574344 C1QAP02745 245 aa9.08□□□□□ -0.96
NPLOC4-216ENST00000574344 DHRS4L1P0CG22 281 aa9.08□□□□□ -0.96
NPLOC4-216ENST00000574344 CCDC166P0CW27 439 aa9.08□□□□□ -0.96
NPLOC4-216ENST00000574344 RNH1P13489 461 aaKnown RBP9.08□□□□□ -0.96
NPLOC4-216ENST00000574344 STMN1P16949 149 aa9.08□□□□□ -0.96
NPLOC4-216ENST00000574344 GNAZP19086 355 aa9.08□□□□□ -0.96
NPLOC4-216ENST00000574344 TYK2P29597 1187 aa9.08□□□□□ -0.96
NPLOC4-216ENST00000574344 GDF5P43026 501 aa9.08□□□□□ -0.96
NPLOC4-216ENST00000574344 ST13P50502 369 aaKnown RBP9.08□□□□□ -0.96
NPLOC4-216ENST00000574344 KCNK10P57789 538 aa9.08□□□□□ -0.96
NPLOC4-216ENST00000574344 STXBP1P61764 594 aaKnown RBP9.08□□□□□ -0.96
NPLOC4-216ENST00000574344 RHAGQ02094 409 aa9.08□□□□□ -0.96
NPLOC4-216ENST00000574344 SLBPQ14493 270 aaKnown RBP eCLIP9.08□□□□□ -0.96
NPLOC4-216ENST00000574344 TGFBIQ15582 683 aa9.08□□□□□ -0.96
NPLOC4-216ENST00000574344 MEP1AQ16819 746 aa9.08□□□□□ -0.96
NPLOC4-216ENST00000574344 C18orf21Q32NC0 220 aaPredicted RBP9.08□□□□□ -0.96
NPLOC4-216ENST00000574344 ZNF766Q5HY98 468 aa9.08□□□□□ -0.96
NPLOC4-216ENST00000574344 ACER2Q5QJU3 275 aa9.08□□□□□ -0.96
NPLOC4-216ENST00000574344 RAPH1Q70E73 1250 aa9.08□□□□□ -0.96
NPLOC4-216ENST00000574344 MAMDC2Q7Z304 686 aaPredicted RBP9.08□□□□□ -0.96
NPLOC4-216ENST00000574344 CRLF3Q8IUI8 442 aa9.08□□□□□ -0.96
NPLOC4-216ENST00000574344 NUDCD3Q8IVD9 361 aa9.08□□□□□ -0.96
NPLOC4-216ENST00000574344 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.08□□□□□ -0.96
NPLOC4-216ENST00000574344 C10orf67Q8IYJ2 551 aa9.08□□□□□ -0.96
NPLOC4-216ENST00000574344 BEST3Q8N1M1 668 aa9.08□□□□□ -0.96
NPLOC4-216ENST00000574344 KRT78Q8N1N4 520 aa9.08□□□□□ -0.96
NPLOC4-216ENST00000574344 TCAIMQ8N3R3 496 aa9.08□□□□□ -0.96
NPLOC4-216ENST00000574344 SPATA6LQ8N4H0 392 aa9.08□□□□□ -0.96
NPLOC4-216ENST00000574344 AFAP1L2Q8N4X5 818 aa9.08□□□□□ -0.96
NPLOC4-216ENST00000574344 SLC5A8Q8N695 610 aa9.08□□□□□ -0.96
NPLOC4-216ENST00000574344 SNX31Q8N9S9 440 aa9.08□□□□□ -0.96
NPLOC4-216ENST00000574344 PLPP5Q8NEB5 264 aa9.08□□□□□ -0.96
NPLOC4-216ENST00000574344 ARMC2Q8NEN0 867 aa9.08□□□□□ -0.96
NPLOC4-216ENST00000574344 M1APQ8TC57 530 aa9.08□□□□□ -0.96
NPLOC4-216ENST00000574344 UTP15Q8TED0 518 aaKnown RBP9.08□□□□□ -0.96
NPLOC4-216ENST00000574344 NR4A3Q92570 626 aa9.08□□□□□ -0.96
NPLOC4-216ENST00000574344 SLX1AQ9BQ83 275 aa9.08□□□□□ -0.96
NPLOC4-216ENST00000574344 UTP23Q9BRU9 249 aaKnown RBP9.08□□□□□ -0.96
NPLOC4-216ENST00000574344 DERL2Q9GZP9 239 aa9.08□□□□□ -0.96
NPLOC4-216ENST00000574344 LANCL2Q9NS86 450 aa9.08□□□□□ -0.96
NPLOC4-216ENST00000574344 ANKRD10Q9NXR5 420 aa9.08□□□□□ -0.96
NPLOC4-216ENST00000574344 CD274Q9NZQ7 290 aa9.08□□□□□ -0.96
NPLOC4-216ENST00000574344 RNF112Q9ULX5 631 aa9.08□□□□□ -0.96
NPLOC4-216ENST00000574344 PLLPQ9Y342 182 aa9.08□□□□□ -0.96
NPLOC4-216ENST00000574344 CENPEQ02224 2701 aa9.08□□□□□ -0.96
NPLOC4-216ENST00000574344 POLEQ07864 2286 aa9.07□□□□□ -0.96
NPLOC4-216ENST00000574344 A0A088AWK7 358 aa9.07□□□□□ -0.96
NPLOC4-216ENST00000574344 A0A0G2JN53 185 aa9.07□□□□□ -0.96
NPLOC4-216ENST00000574344 ANKDD1BA6NHY2 528 aa9.07□□□□□ -0.96
NPLOC4-216ENST00000574344 GABRR3A8MPY1 467 aa9.07□□□□□ -0.96
NPLOC4-216ENST00000574344 A8MUA0 341 aa9.07□□□□□ -0.96
NPLOC4-216ENST00000574344 FAM227AF5H4B4 570 aa9.07□□□□□ -0.96
NPLOC4-216ENST00000574344 DNAJC8O75937 253 aaPredicted RBP9.07□□□□□ -0.96
NPLOC4-216ENST00000574344 TGDSO95455 350 aa9.07□□□□□ -0.96
NPLOC4-216ENST00000574344 SERPINA6P08185 405 aa9.07□□□□□ -0.96
NPLOC4-216ENST00000574344 C1GALT1C1LP0DN25 315 aa9.07□□□□□ -0.96
NPLOC4-216ENST00000574344 MAOAP21397 527 aa9.07□□□□□ -0.96
NPLOC4-216ENST00000574344 ZNF10P21506 573 aaPredicted RBP9.07□□□□□ -0.96
NPLOC4-216ENST00000574344 BGNP21810 368 aa9.07□□□□□ -0.96
NPLOC4-216ENST00000574344 ETV4P43268 484 aa9.07□□□□□ -0.96
NPLOC4-216ENST00000574344 SLC6A12P48065 614 aa9.07□□□□□ -0.96
NPLOC4-216ENST00000574344 HSPA7P48741 367 aa9.07□□□□□ -0.96
NPLOC4-216ENST00000574344 RASSF2P50749 326 aa9.07□□□□□ -0.96
NPLOC4-216ENST00000574344 SLC26A5P58743 744 aa9.07□□□□□ -0.96
NPLOC4-216ENST00000574344 PMP22Q01453 160 aa9.07□□□□□ -0.96
NPLOC4-216ENST00000574344 OC90Q02509 493 aaPredicted RBP9.07□□□□□ -0.96
NPLOC4-216ENST00000574344 SRSF11Q05519 484 aaKnown RBP9.07□□□□□ -0.96
NPLOC4-216ENST00000574344 ASPHQ12797 758 aa9.07□□□□□ -0.96
NPLOC4-216ENST00000574344 FBXO48Q5FWF7 155 aa9.07□□□□□ -0.96
NPLOC4-216ENST00000574344 SPDYAQ5MJ70 313 aa9.07□□□□□ -0.96
NPLOC4-216ENST00000574344 C1QL3Q5VWW1 255 aa9.07□□□□□ -0.96
NPLOC4-216ENST00000574344 GFRALQ6UXV0 394 aa9.07□□□□□ -0.96
NPLOC4-216ENST00000574344 TMIGD1Q6UXZ0 262 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms