RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 CAPS2Q9BXY5 557 aa16.87■□□□□ 0.29
CHD3-214ENST00000572579 CD244Q9BZW8 370 aa16.87■□□□□ 0.29
CHD3-214ENST00000572579 PITHD1Q9GZP4 211 aaPredicted RBP16.87■□□□□ 0.29
CHD3-214ENST00000572579 ALG9Q9H6U8 611 aa16.87■□□□□ 0.29
CHD3-214ENST00000572579 DEPPQ9NTK1 212 aa16.87■□□□□ 0.29
CHD3-214ENST00000572579 CD274Q9NZQ7 290 aa16.87■□□□□ 0.29
CHD3-214ENST00000572579 DAPP1Q9UN19 280 aa16.87■□□□□ 0.29
CHD3-214ENST00000572579 MEMO1Q9Y316 297 aa16.87■□□□□ 0.29
CHD3-214ENST00000572579 ANKDD1BA6NHY2 528 aa16.86■□□□□ 0.29
CHD3-214ENST00000572579 CDK2AP1O14519 115 aa16.86■□□□□ 0.29
CHD3-214ENST00000572579 CLGNO14967 610 aa16.86■□□□□ 0.29
CHD3-214ENST00000572579 B3GALT2O43825 422 aa16.86■□□□□ 0.29
CHD3-214ENST00000572579 ZNF354AO60765 605 aaPredicted RBP16.86■□□□□ 0.29
CHD3-214ENST00000572579 ITGA10O75578 1167 aa16.86■□□□□ 0.29
CHD3-214ENST00000572579 GSTM2P28161 218 aa16.86■□□□□ 0.29
CHD3-214ENST00000572579 HTR1EP28566 365 aa16.86■□□□□ 0.29
CHD3-214ENST00000572579 MAGEA4P43358 317 aa16.86■□□□□ 0.29
CHD3-214ENST00000572579 CLCN2P51788 898 aa16.86■□□□□ 0.29
CHD3-214ENST00000572579 MTTPP55157 894 aa16.86■□□□□ 0.29
CHD3-214ENST00000572579 RBPJQ06330 500 aa16.86■□□□□ 0.29
CHD3-214ENST00000572579 CHIT1Q13231 466 aa16.86■□□□□ 0.29
CHD3-214ENST00000572579 TERF2Q15554 542 aa16.86■□□□□ 0.29
CHD3-214ENST00000572579 TBCCQ15814 346 aa16.86■□□□□ 0.29
CHD3-214ENST00000572579 PDK4Q16654 411 aa16.86■□□□□ 0.29
CHD3-214ENST00000572579 GRTP1Q5TC63 336 aa16.86■□□□□ 0.29
CHD3-214ENST00000572579 C3P1Q6ZMU1 363 aa16.86■□□□□ 0.29
CHD3-214ENST00000572579 BNC2Q6ZN30 1099 aaPredicted RBP16.86■□□□□ 0.29
CHD3-214ENST00000572579 MAATS1Q7Z4T9 603 aa16.86■□□□□ 0.29
CHD3-214ENST00000572579 CTAGE3PQ8IX95 158 aa16.86■□□□□ 0.29
CHD3-214ENST00000572579 HORMAD2Q8N7B1 307 aa16.86■□□□□ 0.29
CHD3-214ENST00000572579 ARMC2Q8NEN0 867 aa16.86■□□□□ 0.29
CHD3-214ENST00000572579 CDKL2Q92772 493 aa16.86■□□□□ 0.29
CHD3-214ENST00000572579 EXT2Q93063 718 aa16.86■□□□□ 0.29
CHD3-214ENST00000572579 SERINC2Q96SA4 455 aa16.86■□□□□ 0.29
CHD3-214ENST00000572579 MAPKAP1Q9BPZ7 522 aa16.86■□□□□ 0.29
CHD3-214ENST00000572579 FBXW2Q9UKT8 454 aa16.86■□□□□ 0.29
CHD3-214ENST00000572579 PDZD2O15018 2839 aa16.86■□□□□ 0.29
CHD3-214ENST00000572579 PINLYPA6NC86 204 aa16.85■□□□□ 0.29
CHD3-214ENST00000572579 UBXN8O00124 270 aa16.85■□□□□ 0.29
CHD3-214ENST00000572579 CCNT2O60583 730 aaKnown RBP16.85■□□□□ 0.29
CHD3-214ENST00000572579 CTNSO60931 367 aa16.85■□□□□ 0.29
CHD3-214ENST00000572579 SH3BGRLO75368 114 aa16.85■□□□□ 0.29
CHD3-214ENST00000572579 GSTA2P09210 222 aa16.85■□□□□ 0.29
CHD3-214ENST00000572579 TFEBP19484 476 aa16.85■□□□□ 0.29
CHD3-214ENST00000572579 PCDH1Q08174 1060 aa16.85■□□□□ 0.29
CHD3-214ENST00000572579 SLC13A2Q13183 592 aa16.85■□□□□ 0.29
CHD3-214ENST00000572579 MCEMP1Q8IX19 187 aa16.85■□□□□ 0.29
CHD3-214ENST00000572579 ZNF595Q8IYB9 648 aa16.85■□□□□ 0.29
CHD3-214ENST00000572579 CENPLQ8N0S6 344 aaPredicted RBP16.85■□□□□ 0.29
CHD3-214ENST00000572579 ANKRD9Q96BM1 317 aaPredicted RBP16.85■□□□□ 0.29
CHD3-214ENST00000572579 NXNL1Q96CM4 212 aa16.85■□□□□ 0.29
CHD3-214ENST00000572579 SORBS1Q9BX66 1292 aaKnown RBP16.85■□□□□ 0.29
CHD3-214ENST00000572579 MS4A8Q9BY19 250 aa16.85■□□□□ 0.29
CHD3-214ENST00000572579 CNOT10Q9H9A5 744 aaKnown RBP16.85■□□□□ 0.29
CHD3-214ENST00000572579 SUCOQ9UBS9 1254 aaKnown RBP16.85■□□□□ 0.29
CHD3-214ENST00000572579 VTI1BQ9UEU0 232 aa16.85■□□□□ 0.29
CHD3-214ENST00000572579 RNF112Q9ULX5 631 aa16.85■□□□□ 0.29
CHD3-214ENST00000572579 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.85■□□□□ 0.29
CHD3-214ENST00000572579 OTOGQ6ZRI0 2925 aa16.84■□□□□ 0.29
CHD3-214ENST00000572579 A0A0G2JMM0 328 aa16.84■□□□□ 0.29
CHD3-214ENST00000572579 A0A1W2PPB8 328 aa16.84■□□□□ 0.29
CHD3-214ENST00000572579 A0A1W2PRS3 328 aa16.84■□□□□ 0.29
CHD3-214ENST00000572579 ESYT3A0FGR9 886 aa16.84■□□□□ 0.29
CHD3-214ENST00000572579 LRRC14BA6NHZ5 514 aa16.84■□□□□ 0.29
CHD3-214ENST00000572579 KIR3DP1A8MWS1 328 aa16.84■□□□□ 0.29
CHD3-214ENST00000572579 PEX1O43933 1283 aa16.84■□□□□ 0.29
CHD3-214ENST00000572579 ZNF24P17028 368 aa16.84■□□□□ 0.29
CHD3-214ENST00000572579 ATP5A1P25705 553 aaKnown RBP16.84■□□□□ 0.29
CHD3-214ENST00000572579 TNFRSF8P28908 595 aa16.84■□□□□ 0.29
CHD3-214ENST00000572579 SPRP35270 261 aaPredicted RBP16.84■□□□□ 0.29
CHD3-214ENST00000572579 MSH2P43246 934 aa16.84■□□□□ 0.29
CHD3-214ENST00000572579 MEOX1P50221 254 aa16.84■□□□□ 0.29
CHD3-214ENST00000572579 GPR85P60893 370 aa16.84■□□□□ 0.29
CHD3-214ENST00000572579 IRF9Q00978 393 aa16.84■□□□□ 0.29
CHD3-214ENST00000572579 ID2Q02363 134 aa16.84■□□□□ 0.29
CHD3-214ENST00000572579 IRF8Q02556 426 aa16.84■□□□□ 0.29
CHD3-214ENST00000572579 ILF2Q12905 390 aaKnown RBP16.84■□□□□ 0.29
CHD3-214ENST00000572579 CMPK2Q5EBM0 449 aa16.84■□□□□ 0.29
CHD3-214ENST00000572579 TRIM40Q6P9F5 258 aa16.84■□□□□ 0.29
CHD3-214ENST00000572579 RPTNQ6XPR3 784 aa16.84■□□□□ 0.29
CHD3-214ENST00000572579 SYT10Q6XYQ8 523 aa16.84■□□□□ 0.29
CHD3-214ENST00000572579 ZNF572Q7Z3I7 529 aaPredicted RBP16.84■□□□□ 0.29
CHD3-214ENST00000572579 LAS2Q8IYD9 372 aa16.84■□□□□ 0.29
CHD3-214ENST00000572579 ACOT4Q8N9L9 421 aa16.84■□□□□ 0.29
CHD3-214ENST00000572579 AGAP11Q8TF27 550 aa16.84■□□□□ 0.29
CHD3-214ENST00000572579 VMP1Q96GC9 406 aa16.84■□□□□ 0.29
CHD3-214ENST00000572579 MAGED4Q96JG8 741 aa16.84■□□□□ 0.29
CHD3-214ENST00000572579 DMRTA2Q96SC8 542 aa16.84■□□□□ 0.29
CHD3-214ENST00000572579 EFCAB11Q9BUY7 163 aa16.84■□□□□ 0.29
CHD3-214ENST00000572579 ALOXE3Q9BYJ1 711 aa16.84■□□□□ 0.29
CHD3-214ENST00000572579 TXNDC16Q9P2K2 825 aa16.84■□□□□ 0.29
CHD3-214ENST00000572579 PKDREJQ9NTG1 2253 aa16.84■□□□□ 0.29
CHD3-214ENST00000572579 WASHC1A8K0Z3 465 aa16.83■□□□□ 0.28
CHD3-214ENST00000572579 SAP18O00422 153 aaKnown RBP16.83■□□□□ 0.28
CHD3-214ENST00000572579 CLDN4O14493 209 aa16.83■□□□□ 0.28
CHD3-214ENST00000572579 FCHO1O14526 889 aa16.83■□□□□ 0.28
CHD3-214ENST00000572579 LDB3O75112 727 aa16.83■□□□□ 0.28
CHD3-214ENST00000572579 OR2J2O76002 312 aa16.83■□□□□ 0.28
CHD3-214ENST00000572579 OR6B1O95007 311 aa16.83■□□□□ 0.28
CHD3-214ENST00000572579 ETHE1O95571 254 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms