RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 FRG2BQ96QU4 278 aa16.1■□□□□ 0.17
LITAF-209ENST00000571688 GFM1Q96RP9 751 aaKnown RBP16.1■□□□□ 0.17
LITAF-209ENST00000571688 KCNJ15Q99712 375 aa16.1■□□□□ 0.17
LITAF-209ENST00000571688 TCF25Q9BQ70 676 aa16.1■□□□□ 0.17
LITAF-209ENST00000571688 NMNAT1Q9HAN9 279 aaPredicted RBP16.1■□□□□ 0.17
LITAF-209ENST00000571688 ST3GAL5Q9UNP4 418 aa16.1■□□□□ 0.17
LITAF-209ENST00000571688 KCNE2Q9Y6J6 123 aa16.1■□□□□ 0.17
LITAF-209ENST00000571688 I3L521 148 aa16.09■□□□□ 0.17
LITAF-209ENST00000571688 BTN3A3O00478 584 aa16.09■□□□□ 0.17
LITAF-209ENST00000571688 GADD45GO95257 159 aa16.09■□□□□ 0.17
LITAF-209ENST00000571688 ZNF250P15622 560 aa16.09■□□□□ 0.17
LITAF-209ENST00000571688 CPEP16870 476 aa16.09■□□□□ 0.17
LITAF-209ENST00000571688 ATF6P18850 670 aa16.09■□□□□ 0.17
LITAF-209ENST00000571688 POU1F1P28069 291 aa16.09■□□□□ 0.17
LITAF-209ENST00000571688 CDKL4Q5MAI5 379 aa16.09■□□□□ 0.17
LITAF-209ENST00000571688 PDZD3Q86UT5 571 aa16.09■□□□□ 0.17
LITAF-209ENST00000571688 ZNF680Q8NEM1 530 aa16.09■□□□□ 0.17
LITAF-209ENST00000571688 KCTD7Q96MP8 289 aa16.09■□□□□ 0.17
LITAF-209ENST00000571688 ZSCAN5AQ9BUG6 496 aa16.09■□□□□ 0.17
LITAF-209ENST00000571688 SPNS1Q9H2V7 528 aa16.09■□□□□ 0.17
LITAF-209ENST00000571688 MRPL39Q9NYK5 338 aaKnown RBP16.09■□□□□ 0.17
LITAF-209ENST00000571688 F5H5T6 163 aa16.09■□□□□ 0.17
LITAF-209ENST00000571688 SCAMP2O15127 329 aaKnown RBP16.09■□□□□ 0.17
LITAF-209ENST00000571688 PRAMEF4O60810 478 aa16.09■□□□□ 0.17
LITAF-209ENST00000571688 PRAMEF1O95521 474 aa16.09■□□□□ 0.17
LITAF-209ENST00000571688 HMGCLP35914 325 aa16.09■□□□□ 0.17
LITAF-209ENST00000571688 RPIAP49247 311 aa16.09■□□□□ 0.17
LITAF-209ENST00000571688 STK19P49842 368 aaPredicted RBP16.09■□□□□ 0.17
LITAF-209ENST00000571688 MVDP53602 400 aa16.09■□□□□ 0.17
LITAF-209ENST00000571688 PURAQ00577 322 aaKnown RBP16.09■□□□□ 0.17
LITAF-209ENST00000571688 NFE2L1Q14494 772 aa16.09■□□□□ 0.17
LITAF-209ENST00000571688 P2RY14Q15391 338 aa16.09■□□□□ 0.17
LITAF-209ENST00000571688 SF3A2Q15428 464 aaKnown RBP16.09■□□□□ 0.17
LITAF-209ENST00000571688 DALRD3Q5D0E6 543 aaKnown RBP16.09■□□□□ 0.17
LITAF-209ENST00000571688 C10orf120Q5SQS8 335 aa16.09■□□□□ 0.17
LITAF-209ENST00000571688 PRAMEF9Q5VWM5 478 aa16.09■□□□□ 0.17
LITAF-209ENST00000571688 ZNF770Q6IQ21 691 aaPredicted RBP16.09■□□□□ 0.17
LITAF-209ENST00000571688 CNIH2Q6PI25 160 aa16.09■□□□□ 0.17
LITAF-209ENST00000571688 METAP1DQ6UB28 335 aaPredicted RBP16.09■□□□□ 0.17
LITAF-209ENST00000571688 GHDCQ8N2G8 530 aa16.09■□□□□ 0.17
LITAF-209ENST00000571688 CDC26Q8NHZ8 85 aa16.09■□□□□ 0.17
LITAF-209ENST00000571688 GEMIN6Q8WXD5 167 aaKnown RBP16.09■□□□□ 0.17
LITAF-209ENST00000571688 SUSD3Q96L08 255 aa16.09■□□□□ 0.17
LITAF-209ENST00000571688 TMEM43Q9BTV4 400 aa16.09■□□□□ 0.17
LITAF-209ENST00000571688 GPATCH2Q9NW75 528 aa16.09■□□□□ 0.17
LITAF-209ENST00000571688 ARL15Q9NXU5 204 aa16.09■□□□□ 0.17
LITAF-209ENST00000571688 RPL36Q9Y3U8 105 aaKnown RBP16.09■□□□□ 0.17
LITAF-209ENST00000571688 CDH10Q9Y6N8 788 aa16.09■□□□□ 0.17
LITAF-209ENST00000571688 FABP7O15540 132 aa16.08■□□□□ 0.17
LITAF-209ENST00000571688 TYMPP19971 482 aa16.08■□□□□ 0.17
LITAF-209ENST00000571688 ENPP1P22413 925 aa16.08■□□□□ 0.17
LITAF-209ENST00000571688 TALDO1P37837 337 aa16.08■□□□□ 0.17
LITAF-209ENST00000571688 CPT1AP50416 773 aa16.08■□□□□ 0.17
LITAF-209ENST00000571688 DGKEP52429 567 aa16.08■□□□□ 0.17
LITAF-209ENST00000571688 CYP27C1Q4G0S4 372 aa16.08■□□□□ 0.17
LITAF-209ENST00000571688 CCSAPQ6IQ19 270 aaPredicted RBP16.08■□□□□ 0.17
LITAF-209ENST00000571688 ANKS3Q6ZW76 656 aa16.08■□□□□ 0.17
LITAF-209ENST00000571688 NPAS3Q8IXF0 933 aa16.08■□□□□ 0.17
LITAF-209ENST00000571688 OR8H3Q8N146 312 aa16.08■□□□□ 0.17
LITAF-209ENST00000571688 GPR63Q9BZJ6 419 aa16.08■□□□□ 0.17
LITAF-209ENST00000571688 PPIL3Q9H2H8 161 aaKnown RBP16.08■□□□□ 0.17
LITAF-209ENST00000571688 LOC102723532A0A0G2JNH3 316 aa16.08■□□□□ 0.16
LITAF-209ENST00000571688 F8W810 466 aa16.08■□□□□ 0.16
LITAF-209ENST00000571688 INMT-MINDY4F8WBC2 141 aa16.08■□□□□ 0.16
LITAF-209ENST00000571688 TPPPO94811 219 aa16.08■□□□□ 0.16
LITAF-209ENST00000571688 TRBC1P01850 177 aa16.08■□□□□ 0.16
LITAF-209ENST00000571688 IRS1P35568 1242 aa16.08■□□□□ 0.16
LITAF-209ENST00000571688 SOX9P48436 509 aa16.08■□□□□ 0.16
LITAF-209ENST00000571688 RING1Q06587 406 aa16.08■□□□□ 0.16
LITAF-209ENST00000571688 GANABQ14697 944 aaKnown RBP16.08■□□□□ 0.16
LITAF-209ENST00000571688 FLYWCH1Q4VC44 716 aa16.08■□□□□ 0.16
LITAF-209ENST00000571688 GPR65Q8IYL9 337 aa16.08■□□□□ 0.16
LITAF-209ENST00000571688 IL17RCQ8NAC3 791 aa16.08■□□□□ 0.16
LITAF-209ENST00000571688 LSM14AQ8ND56 463 aaKnown RBP16.08■□□□□ 0.16
LITAF-209ENST00000571688 LHFPL5Q8TAF8 219 aa16.08■□□□□ 0.16
LITAF-209ENST00000571688 TMEM163Q8TC26 289 aa16.08■□□□□ 0.16
LITAF-209ENST00000571688 TSSK6Q9BXA6 273 aa16.08■□□□□ 0.16
LITAF-209ENST00000571688 COQ3Q9NZJ6 369 aa16.08■□□□□ 0.16
LITAF-209ENST00000571688 SMIM30A4D0T7 59 aa16.07■□□□□ 0.16
LITAF-209ENST00000571688 PRR23AA6NEV1 266 aa16.07■□□□□ 0.16
LITAF-209ENST00000571688 SGK494L7N484 410 aa16.07■□□□□ 0.16
LITAF-209ENST00000571688 QSOX1O00391 747 aa16.07■□□□□ 0.16
LITAF-209ENST00000571688 ZNF865P0CJ78 1059 aaPredicted RBP16.07■□□□□ 0.16
LITAF-209ENST00000571688 ETFAP13804 333 aa16.07■□□□□ 0.16
LITAF-209ENST00000571688 PTBP1P26599 531 aaKnown RBP eCLIP16.07■□□□□ 0.161e-6■■■■□ 22.8
LITAF-209ENST00000571688 SLC6A4P31645 630 aa16.07■□□□□ 0.16
LITAF-209ENST00000571688 FEN1P39748 380 aaKnown RBP16.07■□□□□ 0.16
LITAF-209ENST00000571688 RIN1Q13671 783 aa16.07■□□□□ 0.16
LITAF-209ENST00000571688 COX20Q5RI15 118 aa16.07■□□□□ 0.16
LITAF-209ENST00000571688 MACC1Q6ZN28 852 aa16.07■□□□□ 0.16
LITAF-209ENST00000571688 WDR53Q7Z5U6 358 aaPredicted RBP16.07■□□□□ 0.16
LITAF-209ENST00000571688 TMEM203Q969S6 136 aa16.07■□□□□ 0.16
LITAF-209ENST00000571688 PIGUQ9H490 435 aa16.07■□□□□ 0.16
LITAF-209ENST00000571688 ASB8Q9H765 288 aa16.07■□□□□ 0.16
LITAF-209ENST00000571688 COMMD3Q9UBI1 195 aa16.07■□□□□ 0.16
LITAF-209ENST00000571688 REV1Q9UBZ9 1251 aa16.07■□□□□ 0.16
LITAF-209ENST00000571688 DNMT3AQ9Y6K1 912 aaPredicted RBP16.07■□□□□ 0.16
LITAF-209ENST00000571688 ENPP4Q9Y6X5 453 aa16.07■□□□□ 0.16
LITAF-209ENST00000571688 GABRR3A8MPY1 467 aa16.07■□□□□ 0.16
LITAF-209ENST00000571688 H3BNC9 293 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms