RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 LCP2Q13094 533 aa14.24□□□□□ -0.13
RAB40B-203ENST00000570676 EIF2S3LQ2VIR3 472 aaKnown RBP14.24□□□□□ -0.13
RAB40B-203ENST00000570676 ARL13AQ5H913 290 aaPredicted RBP14.24□□□□□ -0.13
RAB40B-203ENST00000570676 RGS9BPQ6ZS82 235 aa14.24□□□□□ -0.13
RAB40B-203ENST00000570676 AFAP1L2Q8N4X5 818 aa14.24□□□□□ -0.13
RAB40B-203ENST00000570676 ZNF740Q8NDX6 193 aa14.24□□□□□ -0.13
RAB40B-203ENST00000570676 OR51Q1Q8NH59 317 aa14.24□□□□□ -0.13
RAB40B-203ENST00000570676 DNAJB14Q8TBM8 379 aa14.24□□□□□ -0.13
RAB40B-203ENST00000570676 SLC13A3Q8WWT9 602 aa14.24□□□□□ -0.13
RAB40B-203ENST00000570676 SLC5A11Q8WWX8 675 aa14.24□□□□□ -0.13
RAB40B-203ENST00000570676 NEIL2Q969S2 332 aa14.24□□□□□ -0.13
RAB40B-203ENST00000570676 ATP6V1E2Q96A05 226 aa14.24□□□□□ -0.13
RAB40B-203ENST00000570676 IMMP1LQ96LU5 166 aa14.24□□□□□ -0.13
RAB40B-203ENST00000570676 LMF1Q96S06 567 aa14.24□□□□□ -0.13
RAB40B-203ENST00000570676 CAPS2Q9BXY5 557 aa14.24□□□□□ -0.13
RAB40B-203ENST00000570676 ZNF395Q9H8N7 513 aaPredicted RBP14.24□□□□□ -0.13
RAB40B-203ENST00000570676 EML4Q9HC35 981 aaKnown RBP14.24□□□□□ -0.13
RAB40B-203ENST00000570676 ANKHQ9HCJ1 492 aa14.24□□□□□ -0.13
RAB40B-203ENST00000570676 GPRC5BQ9NZH0 403 aa14.24□□□□□ -0.13
RAB40B-203ENST00000570676 STK38LQ9Y2H1 464 aa14.24□□□□□ -0.13
RAB40B-203ENST00000570676 COPG1Q9Y678 874 aaKnown RBP14.24□□□□□ -0.13
RAB40B-203ENST00000570676 SLC22A7Q9Y694 548 aa14.24□□□□□ -0.13
RAB40B-203ENST00000570676 KCNE2Q9Y6J6 123 aa14.24□□□□□ -0.13
RAB40B-203ENST00000570676 SPTAN1Q13813 2472 aaKnown RBP14.23□□□□□ -0.13
RAB40B-203ENST00000570676 TRBC2A0A5B9 178 aa14.23□□□□□ -0.13
RAB40B-203ENST00000570676 PPP6CO00743 305 aa14.23□□□□□ -0.13
RAB40B-203ENST00000570676 OR7A17O14581 309 aa14.23□□□□□ -0.13
RAB40B-203ENST00000570676 CLGNO14967 610 aa14.23□□□□□ -0.13
RAB40B-203ENST00000570676 NDUFS4O43181 175 aa14.23□□□□□ -0.13
RAB40B-203ENST00000570676 SNNO75324 88 aaPredicted RBP14.23□□□□□ -0.13
RAB40B-203ENST00000570676 OTCP00480 354 aa14.23□□□□□ -0.13
RAB40B-203ENST00000570676 ITGAMP11215 1152 aa14.23□□□□□ -0.13
RAB40B-203ENST00000570676 GNAZP19086 355 aa14.23□□□□□ -0.13
RAB40B-203ENST00000570676 ARRB2P32121 409 aa14.23□□□□□ -0.13
RAB40B-203ENST00000570676 CCNG1P51959 295 aa14.23□□□□□ -0.13
RAB40B-203ENST00000570676 TLR1Q15399 786 aa14.23□□□□□ -0.13
RAB40B-203ENST00000570676 RIPOR1Q6ZS17 1223 aa14.23□□□□□ -0.13
RAB40B-203ENST00000570676 SIRT6Q8N6T7 355 aa14.23□□□□□ -0.13
RAB40B-203ENST00000570676 CATSPER1Q8NEC5 780 aa14.23□□□□□ -0.13
RAB40B-203ENST00000570676 OR52B6Q8NGF0 335 aa14.23□□□□□ -0.13
RAB40B-203ENST00000570676 SSC4DQ8WTU2 575 aa14.23□□□□□ -0.13
RAB40B-203ENST00000570676 ZNF382Q96SR6 550 aa14.23□□□□□ -0.13
RAB40B-203ENST00000570676 TUBB6Q9BUF5 446 aa14.23□□□□□ -0.13
RAB40B-203ENST00000570676 SHCBP1LQ9BZQ2 653 aa14.23□□□□□ -0.13
RAB40B-203ENST00000570676 CCDC134Q9H6E4 229 aa14.23□□□□□ -0.13
RAB40B-203ENST00000570676 THAP1Q9NVV9 213 aa14.23□□□□□ -0.13
RAB40B-203ENST00000570676 PTGFRNQ9P2B2 879 aa14.23□□□□□ -0.13
RAB40B-203ENST00000570676 NAALAD2Q9Y3Q0 740 aa14.23□□□□□ -0.13
RAB40B-203ENST00000570676 RP1L1Q8IWN7 2480 aaPredicted RBP14.23□□□□□ -0.13
RAB40B-203ENST00000570676 IGHV3-20A0A0C4DH32 117 aa14.22□□□□□ -0.13
RAB40B-203ENST00000570676 OR2W5A6NFC9 320 aa14.22□□□□□ -0.13
RAB40B-203ENST00000570676 ZNF860A6NHJ4 632 aa14.22□□□□□ -0.13
RAB40B-203ENST00000570676 UBFD1O14562 309 aaKnown RBP14.22□□□□□ -0.13
RAB40B-203ENST00000570676 OR1F1O43749 312 aa14.22□□□□□ -0.13
RAB40B-203ENST00000570676 SCTRP47872 440 aa14.22□□□□□ -0.13
RAB40B-203ENST00000570676 PKNOX1P55347 436 aa14.22□□□□□ -0.13
RAB40B-203ENST00000570676 GNGT1P63211 74 aa14.22□□□□□ -0.13
RAB40B-203ENST00000570676 IRF8Q02556 426 aa14.22□□□□□ -0.13
RAB40B-203ENST00000570676 CHIT1Q13231 466 aa14.22□□□□□ -0.13
RAB40B-203ENST00000570676 PWP1Q13610 501 aa14.22□□□□□ -0.13
RAB40B-203ENST00000570676 MINDY4Q4G0A6 757 aa14.22□□□□□ -0.13
RAB40B-203ENST00000570676 GPRIN3Q6ZVF9 776 aa14.22□□□□□ -0.13
RAB40B-203ENST00000570676 TMPRSS11BQ86T26 416 aa14.22□□□□□ -0.13
RAB40B-203ENST00000570676 OR5T3Q8NGG3 340 aa14.22□□□□□ -0.13
RAB40B-203ENST00000570676 NT5CQ8TCD5 201 aa14.22□□□□□ -0.13
RAB40B-203ENST00000570676 GRHL3Q8TE85 626 aa14.22□□□□□ -0.13
RAB40B-203ENST00000570676 AGAP11Q8TF27 550 aa14.22□□□□□ -0.13
RAB40B-203ENST00000570676 CDK15Q96Q40 435 aa14.22□□□□□ -0.13
RAB40B-203ENST00000570676 RBCK1Q9BYM8 510 aa14.22□□□□□ -0.13
RAB40B-203ENST00000570676 C20orf27Q9GZN8 174 aa14.22□□□□□ -0.13
RAB40B-203ENST00000570676 ACTR8Q9H981 624 aa14.22□□□□□ -0.13
RAB40B-203ENST00000570676 PELI2Q9HAT8 420 aa14.22□□□□□ -0.13
RAB40B-203ENST00000570676 MID1IP1Q9NPA3 183 aa14.22□□□□□ -0.13
RAB40B-203ENST00000570676 LANCL2Q9NS86 450 aa14.22□□□□□ -0.13
RAB40B-203ENST00000570676 ERRFI1Q9UJM3 462 aaPredicted RBP14.22□□□□□ -0.13
RAB40B-203ENST00000570676 SPTBN1Q01082 2364 aaKnown RBP14.21□□□□□ -0.13
RAB40B-203ENST00000570676 ANKUB1A6NFN9 424 aa14.21□□□□□ -0.13
RAB40B-203ENST00000570676 C4orf51C9J302 202 aa14.21□□□□□ -0.13
RAB40B-203ENST00000570676 GALR3O60755 368 aaPredicted RBP14.21□□□□□ -0.13
RAB40B-203ENST00000570676 SEC24DO94855 1032 aaPredicted RBP14.21□□□□□ -0.13
RAB40B-203ENST00000570676 SNUPNO95149 360 aaKnown RBP14.21□□□□□ -0.13
RAB40B-203ENST00000570676 ESRRBO95718 433 aa14.21□□□□□ -0.13
RAB40B-203ENST00000570676 B3GALT4O96024 378 aa14.21□□□□□ -0.13
RAB40B-203ENST00000570676 VIMP08670 466 aaKnown RBP14.21□□□□□ -0.13
RAB40B-203ENST00000570676 TNFSF10P50591 281 aa14.21□□□□□ -0.13
RAB40B-203ENST00000570676 OCRLQ01968 901 aa14.21□□□□□ -0.13
RAB40B-203ENST00000570676 RHAGQ02094 409 aa14.21□□□□□ -0.13
RAB40B-203ENST00000570676 GALNT1Q10472 559 aaPredicted RBP14.21□□□□□ -0.13
RAB40B-203ENST00000570676 HYAL2Q12891 473 aa14.21□□□□□ -0.13
RAB40B-203ENST00000570676 TRAF3Q13114 568 aa14.21□□□□□ -0.13
RAB40B-203ENST00000570676 HERC3Q15034 1050 aa14.21□□□□□ -0.13
RAB40B-203ENST00000570676 XKR6Q5GH73 641 aa14.21□□□□□ -0.13
RAB40B-203ENST00000570676 MFSD4BQ5TF39 518 aa14.21□□□□□ -0.13
RAB40B-203ENST00000570676 RPUSD3Q6P087 351 aaKnown RBP14.21□□□□□ -0.13
RAB40B-203ENST00000570676 NXPE4Q6UWF7 544 aa14.21□□□□□ -0.13
RAB40B-203ENST00000570676 SLCO4C1Q6ZQN7 724 aa14.21□□□□□ -0.13
RAB40B-203ENST00000570676 FAM47EQ6ZV65 393 aa14.21□□□□□ -0.13
RAB40B-203ENST00000570676 CPEB2Q7Z5Q1 589 aaKnown RBP14.21□□□□□ -0.13
RAB40B-203ENST00000570676 MILR1Q7Z6M3 343 aa14.21□□□□□ -0.13
RAB40B-203ENST00000570676 ANKRD37Q7Z713 158 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms