RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 GABRA4P48169 554 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 ALDH9A1P49189 494 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 ATP4BP51164 291 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 DIO3P55073 304 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 NME5P56597 212 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 KCNK10P57789 538 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 TRA2BP62995 288 aaKnown RBP6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 SHC2P98077 582 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 MC2RQ01718 297 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 TBL3Q12788 808 aaKnown RBP6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 FAM53BQ14153 422 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 HEPACAMQ14CZ8 416 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 DPY19L1Q2PZI1 675 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 PRTGQ2VWP7 1150 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 RFTN2Q52LD8 501 aaPredicted RBP6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 PDCD4Q53EL6 469 aaKnown RBP6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 MFSD4BQ5TF39 518 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 C1orf189Q5VU69 101 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 CDCP2Q5VXM1 449 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 TMEM198Q66K66 360 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 PRMT9Q6P2P2 845 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 GALNT18Q6P9A2 607 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 R3HCC1LQ7Z5L2 792 aaKnown RBP6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 PIGWQ7Z7B1 504 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 MTDHQ86UE4 582 aaKnown RBP6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 SLCO6A1Q86UG4 719 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 DSELQ8IZU8 1212 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 ZCCHC7Q8N3Z6 543 aaKnown RBP6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 METTL27Q8N6F8 245 aaPredicted RBP6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 ACOT4Q8N9L9 421 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 OR9A4Q8NGU2 314 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 CLHC1Q8NHS4 586 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 CHTF18Q8WVB6 975 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 ZNF775Q96BV0 537 aaPredicted RBP6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 PPCDCQ96CD2 204 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 ERP27Q96DN0 273 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 MMABQ96EY8 250 aaPredicted RBP6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 C10orf90Q96M02 699 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 ZNF285Q96NJ3 590 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 PRPF18Q99633 342 aaKnown RBP6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 DDA1Q9BW61 102 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 NMUR2Q9GZQ4 415 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 SPRTNQ9H040 489 aaPredicted RBP6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 KLHL31Q9H511 634 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 KCNK13Q9HB14 408 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 MYNNQ9NPC7 610 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 ATAD3AQ9NVI7 634 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 OCIAD1Q9NX40 245 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 MS4A12Q9NXJ0 267 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 HCN3Q9P1Z3 774 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 DHCR7Q9UBM7 475 aaKnown RBP6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 GPN3Q9UHW5 284 aaPredicted RBP6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 FBXW2Q9UKT8 454 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 ENTPD4Q9Y227 616 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 DLGAP4Q9Y2H0 992 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 MRPS2Q9Y399 296 aaKnown RBP6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 CCL27Q9Y4X3 112 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 COPG1Q9Y678 874 aaKnown RBP6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 ADAMTS9Q9P2N4 1935 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 GPR179Q6PRD1 2367 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 CACNA1EQ15878 2313 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 C1orf226A1L170 272 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 BLACEA4D250 179 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 FAM149AA5PLN7 773 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 C4orf51C9J302 202 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 H0YIG0 161 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 SGK494L7N484 410 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 ANGPT2O15123 496 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 SCAMP2O15127 329 aaKnown RBP6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 AKAP10O43572 662 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 HCRTR1O43613 425 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 SLC22A3O75751 556 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 KIAA0754O94854 1291 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 SCELO95171 688 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 LRATO95237 230 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 B3GALT4O96024 378 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 KLK3P07288 261 aaPredicted RBP6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 IL3P08700 152 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 ALDOCP09972 364 aaKnown RBP6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 G6PDP11413 515 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 FGF5P12034 268 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 CCL4P13236 92 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 RNH1P13489 461 aaKnown RBP6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 ITIH1P19827 911 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 PRPS1L1P21108 318 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 TPP2P29144 1249 aaPredicted RBP6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 RBMS1P29558 406 aaKnown RBP6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 PPP2R1BP30154 601 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 BSGP35613 385 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 RAB38P57729 211 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 TAS2R50P59544 299 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 GABREP78334 506 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 OLR1P78380 273 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 TNFRSF17Q02223 184 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 KLC1Q07866 573 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 ACTN3Q08043 901 aaPredicted RBP6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 ABHD18Q0P651 414 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 HYAL2Q12891 473 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 TARDBPQ13148 414 aaKnown RBP eCLIP6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 SLAMF1Q13291 335 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms