RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 TMIGD1Q6UXZ0 262 aa13.65□□□□□ -0.22
COMMD4-225ENST00000569245 LINC00696Q6ZRV3 163 aa13.65□□□□□ -0.22
COMMD4-225ENST00000569245 CUZD1Q86UP6 607 aa13.65□□□□□ -0.22
COMMD4-225ENST00000569245 AFAP1L2Q8N4X5 818 aa13.65□□□□□ -0.22
COMMD4-225ENST00000569245 TEX9Q8N6V9 391 aa13.65□□□□□ -0.22
COMMD4-225ENST00000569245 TTLQ8NG68 377 aa13.65□□□□□ -0.22
COMMD4-225ENST00000569245 OR5T3Q8NGG3 340 aa13.65□□□□□ -0.22
COMMD4-225ENST00000569245 PIWIL2Q8TC59 973 aaKnown RBP13.65□□□□□ -0.22
COMMD4-225ENST00000569245 TRPC4APQ8TEL6 797 aa13.65□□□□□ -0.22
COMMD4-225ENST00000569245 AGAP11Q8TF27 550 aa13.65□□□□□ -0.22
COMMD4-225ENST00000569245 NTMT1Q9BV86 223 aa13.65□□□□□ -0.22
COMMD4-225ENST00000569245 NSRP1Q9H0G5 558 aaKnown RBP13.65□□□□□ -0.22
COMMD4-225ENST00000569245 NOL11Q9H8H0 719 aaKnown RBP13.65□□□□□ -0.22
COMMD4-225ENST00000569245 IPPKQ9H8X2 491 aa13.65□□□□□ -0.22
COMMD4-225ENST00000569245 ZBTB20Q9HC78 741 aaPredicted RBP13.65□□□□□ -0.22
COMMD4-225ENST00000569245 RIC8BQ9NVN3 520 aa13.65□□□□□ -0.22
COMMD4-225ENST00000569245 GPRC5BQ9NZH0 403 aa13.65□□□□□ -0.22
COMMD4-225ENST00000569245 C19orf25Q9UFG5 118 aaPredicted RBP13.65□□□□□ -0.22
COMMD4-225ENST00000569245 B3GNT3Q9Y2A9 372 aa13.65□□□□□ -0.22
COMMD4-225ENST00000569245 ANGPTL3Q9Y5C1 460 aa13.65□□□□□ -0.22
COMMD4-225ENST00000569245 PRRC2CQ9Y520 2896 aaKnown RBP13.65□□□□□ -0.22
COMMD4-225ENST00000569245 CCDC88CQ9P219 2028 aa13.64□□□□□ -0.23
COMMD4-225ENST00000569245 ANKDD1BA6NHY2 528 aa13.64□□□□□ -0.23
COMMD4-225ENST00000569245 PPP6CO00743 305 aa13.64□□□□□ -0.23
COMMD4-225ENST00000569245 OR7A17O14581 309 aa13.64□□□□□ -0.23
COMMD4-225ENST00000569245 CHST10O43529 356 aa13.64□□□□□ -0.23
COMMD4-225ENST00000569245 VPS4BO75351 444 aa13.64□□□□□ -0.23
COMMD4-225ENST00000569245 WFS1O76024 890 aa13.64□□□□□ -0.23
COMMD4-225ENST00000569245 SORBS2O94875 1100 aaKnown RBP13.64□□□□□ -0.23
COMMD4-225ENST00000569245 ESRRBO95718 433 aa13.64□□□□□ -0.23
COMMD4-225ENST00000569245 OTCP00480 354 aa13.64□□□□□ -0.23
COMMD4-225ENST00000569245 SERPINA6P08185 405 aa13.64□□□□□ -0.23
COMMD4-225ENST00000569245 FGF4P08620 206 aa13.64□□□□□ -0.23
COMMD4-225ENST00000569245 ICAM2P13598 275 aa13.64□□□□□ -0.23
COMMD4-225ENST00000569245 EPORP19235 508 aa13.64□□□□□ -0.23
COMMD4-225ENST00000569245 IL10P22301 178 aa13.64□□□□□ -0.23
COMMD4-225ENST00000569245 RPL14P50914 215 aaKnown RBP13.64□□□□□ -0.23
COMMD4-225ENST00000569245 HK2P52789 917 aa13.64□□□□□ -0.23
COMMD4-225ENST00000569245 STXBP1P61764 594 aaKnown RBP13.64□□□□□ -0.23
COMMD4-225ENST00000569245 ACTN3Q08043 901 aaPredicted RBP13.64□□□□□ -0.23
COMMD4-225ENST00000569245 TMEM205Q6UW68 189 aa13.64□□□□□ -0.23
COMMD4-225ENST00000569245 ISLR2Q6UXK2 745 aa13.64□□□□□ -0.23
COMMD4-225ENST00000569245 HOMEZQ8IX15 550 aa13.64□□□□□ -0.23
COMMD4-225ENST00000569245 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.64□□□□□ -0.23
COMMD4-225ENST00000569245 SHISA5Q8N114 240 aa13.64□□□□□ -0.23
COMMD4-225ENST00000569245 ZNF781Q8N8C0 355 aa13.64□□□□□ -0.23
COMMD4-225ENST00000569245 UTP15Q8TED0 518 aaKnown RBP13.64□□□□□ -0.23
COMMD4-225ENST00000569245 MIB2Q96AX9 1013 aa13.64□□□□□ -0.23
COMMD4-225ENST00000569245 FAR2Q96K12 515 aa13.64□□□□□ -0.23
COMMD4-225ENST00000569245 CCT8L2Q96SF2 557 aa13.64□□□□□ -0.23
COMMD4-225ENST00000569245 SLC6A16Q9GZN6 736 aa13.64□□□□□ -0.23
COMMD4-225ENST00000569245 ZNF700Q9H0M5 742 aa13.64□□□□□ -0.23
COMMD4-225ENST00000569245 RHBGQ9H310 441 aa13.64□□□□□ -0.23
COMMD4-225ENST00000569245 KLHL31Q9H511 634 aa13.64□□□□□ -0.23
COMMD4-225ENST00000569245 EPS8L2Q9H6S3 715 aa13.64□□□□□ -0.23
COMMD4-225ENST00000569245 MID1IP1Q9NPA3 183 aa13.64□□□□□ -0.23
COMMD4-225ENST00000569245 PTGFRNQ9P2B2 879 aa13.64□□□□□ -0.23
COMMD4-225ENST00000569245 ZDHHC2Q9UIJ5 367 aa13.64□□□□□ -0.23
COMMD4-225ENST00000569245 VPS4AQ9UN37 437 aa13.64□□□□□ -0.23
COMMD4-225ENST00000569245 TNRC6AQ8NDV7 1962 aaKnown RBP13.63□□□□□ -0.23
COMMD4-225ENST00000569245 LOC102723996A0A087X1L8 192 aa13.63□□□□□ -0.23
COMMD4-225ENST00000569245 IGHV3-20A0A0C4DH32 117 aa13.63□□□□□ -0.23
COMMD4-225ENST00000569245 PSMD12O00232 456 aaPredicted RBP13.63□□□□□ -0.23
COMMD4-225ENST00000569245 B4GALT2O60909 372 aa13.63□□□□□ -0.23
COMMD4-225ENST00000569245 SEC24DO94855 1032 aaPredicted RBP13.63□□□□□ -0.23
COMMD4-225ENST00000569245 FAM107AO95990 144 aa13.63□□□□□ -0.23
COMMD4-225ENST00000569245 SERPINA7P05543 415 aa13.63□□□□□ -0.23
COMMD4-225ENST00000569245 FHP07954 510 aa13.63□□□□□ -0.23
COMMD4-225ENST00000569245 PRR35P0CG20 571 aa13.63□□□□□ -0.23
COMMD4-225ENST00000569245 TSPAN8P19075 237 aa13.63□□□□□ -0.23
COMMD4-225ENST00000569245 AP2B1P63010 937 aa13.63□□□□□ -0.23
COMMD4-225ENST00000569245 BTN3A2P78410 334 aa13.63□□□□□ -0.23
COMMD4-225ENST00000569245 IRF8Q02556 426 aa13.63□□□□□ -0.23
COMMD4-225ENST00000569245 TRAF3Q13114 568 aa13.63□□□□□ -0.23
COMMD4-225ENST00000569245 DOC2AQ14183 400 aa13.63□□□□□ -0.23
COMMD4-225ENST00000569245 E2F2Q14209 437 aa13.63□□□□□ -0.23
COMMD4-225ENST00000569245 ABRAXAS2Q15018 415 aa13.63□□□□□ -0.23
COMMD4-225ENST00000569245 INPP5JQ15735 1006 aaPredicted RBP13.63□□□□□ -0.23
COMMD4-225ENST00000569245 NSDHLQ15738 373 aa13.63□□□□□ -0.23
COMMD4-225ENST00000569245 HIST2H2ACQ16777 129 aaPredicted RBP13.63□□□□□ -0.23
COMMD4-225ENST00000569245 PAGE2BQ5JRK9 111 aa13.63□□□□□ -0.23
COMMD4-225ENST00000569245 HIST2H2AA3Q6FI13 130 aa13.63□□□□□ -0.23
COMMD4-225ENST00000569245 CGB2Q6NT52 195 aa13.63□□□□□ -0.23
COMMD4-225ENST00000569245 LANCL3Q6ZV70 420 aa13.63□□□□□ -0.23
COMMD4-225ENST00000569245 GPRIN3Q6ZVF9 776 aa13.63□□□□□ -0.23
COMMD4-225ENST00000569245 CPEB2Q7Z5Q1 589 aaKnown RBP13.63□□□□□ -0.23
COMMD4-225ENST00000569245 CPLX4Q7Z7G2 160 aa13.63□□□□□ -0.23
COMMD4-225ENST00000569245 CLYBLQ8N0X4 340 aa13.63□□□□□ -0.23
COMMD4-225ENST00000569245 SIRT6Q8N6T7 355 aa13.63□□□□□ -0.23
COMMD4-225ENST00000569245 Q8NA96 180 aa13.63□□□□□ -0.23
COMMD4-225ENST00000569245 OR52B6Q8NGF0 335 aa13.63□□□□□ -0.23
COMMD4-225ENST00000569245 DNAJB14Q8TBM8 379 aa13.63□□□□□ -0.23
COMMD4-225ENST00000569245 BRIX1Q8TDN6 353 aaKnown RBP13.63□□□□□ -0.23
COMMD4-225ENST00000569245 CREB3L4Q8TEY5 395 aa13.63□□□□□ -0.23
COMMD4-225ENST00000569245 ATP6V1E2Q96A05 226 aa13.63□□□□□ -0.23
COMMD4-225ENST00000569245 TBC1D20Q96BZ9 403 aa13.63□□□□□ -0.23
COMMD4-225ENST00000569245 PTCD3Q96EY7 689 aaKnown RBP13.63□□□□□ -0.23
COMMD4-225ENST00000569245 MAGEB10Q96LZ2 347 aaPredicted RBP13.63□□□□□ -0.23
COMMD4-225ENST00000569245 OR1F2PQ96R84 312 aa13.63□□□□□ -0.23
COMMD4-225ENST00000569245 SIKE1Q9BRV8 207 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms