RNA–Protein interactions for RNA: ENST00000569062.1

ABCA3-206, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 5

Gene ABCA3, Length 900 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-206ENST00000569062 MAPKAP1Q9BPZ7 522 aa18.84■□□□□ 0.61
ABCA3-206ENST00000569062 RHOXF2Q9BQY4 288 aa18.84■□□□□ 0.61
ABCA3-206ENST00000569062 OR51B5Q9H339 312 aa18.84■□□□□ 0.61
ABCA3-206ENST00000569062 PNO1Q9NRX1 252 aaKnown RBP18.84■□□□□ 0.61
ABCA3-206ENST00000569062 KCMF1Q9P0J7 381 aa18.84■□□□□ 0.61
ABCA3-206ENST00000569062 ERRFI1Q9UJM3 462 aaPredicted RBP18.84■□□□□ 0.61
ABCA3-206ENST00000569062 ZNF180Q9UJW8 692 aa18.84■□□□□ 0.61
ABCA3-206ENST00000569062 USP9YO00507 2555 aaPredicted RBP18.84■□□□□ 0.61
ABCA3-206ENST00000569062 NBPF19A0A087WUL8 3843 aa18.83■□□□□ 0.6
ABCA3-206ENST00000569062 MYOCOSA0A1B0GUC4 107 aa18.83■□□□□ 0.6
ABCA3-206ENST00000569062 GABRR3A8MPY1 467 aa18.83■□□□□ 0.6
ABCA3-206ENST00000569062 CLDN4O14493 209 aa18.83■□□□□ 0.6
ABCA3-206ENST00000569062 MYO1DO94832 1006 aa18.83■□□□□ 0.6
ABCA3-206ENST00000569062 RASAL1O95294 804 aa18.83■□□□□ 0.6
ABCA3-206ENST00000569062 ATP5A1P25705 553 aaKnown RBP18.83■□□□□ 0.6
ABCA3-206ENST00000569062 ZNF766Q5HY98 468 aa18.83■□□□□ 0.6
ABCA3-206ENST00000569062 LIPJQ5W064 366 aa18.83■□□□□ 0.6
ABCA3-206ENST00000569062 SPINK14Q6IE38 97 aa18.83■□□□□ 0.6
ABCA3-206ENST00000569062 RPS19BP1Q86WX3 136 aaKnown RBP18.83■□□□□ 0.6
ABCA3-206ENST00000569062 IFT20Q8IY31 132 aa18.83■□□□□ 0.6
ABCA3-206ENST00000569062 PTGR2Q8N8N7 351 aaPredicted RBP18.83■□□□□ 0.6
ABCA3-206ENST00000569062 ACOT4Q8N9L9 421 aa18.83■□□□□ 0.6
ABCA3-206ENST00000569062 LRRN4CLQ8ND94 238 aa18.83■□□□□ 0.6
ABCA3-206ENST00000569062 MDS2Q8NDY4 140 aa18.83■□□□□ 0.6
ABCA3-206ENST00000569062 SRFBP1Q8NEF9 429 aaKnown RBP18.83■□□□□ 0.6
ABCA3-206ENST00000569062 HUS1BQ8NHY5 278 aa18.83■□□□□ 0.6
ABCA3-206ENST00000569062 PHF21BQ96EK2 531 aa18.83■□□□□ 0.6
ABCA3-206ENST00000569062 CMTM7Q96FZ5 175 aa18.83■□□□□ 0.6
ABCA3-206ENST00000569062 UTP23Q9BRU9 249 aaKnown RBP18.83■□□□□ 0.6
ABCA3-206ENST00000569062 TBCDQ9BTW9 1192 aa18.83■□□□□ 0.6
ABCA3-206ENST00000569062 SORBS1Q9BX66 1292 aaKnown RBP18.83■□□□□ 0.6
ABCA3-206ENST00000569062 HES7Q9BYE0 225 aa18.83■□□□□ 0.6
ABCA3-206ENST00000569062 IPPKQ9H8X2 491 aa18.83■□□□□ 0.6
ABCA3-206ENST00000569062 ACTR8Q9H981 624 aa18.83■□□□□ 0.6
ABCA3-206ENST00000569062 ABI3Q9P2A4 366 aa18.83■□□□□ 0.6
ABCA3-206ENST00000569062 XPR1Q9UBH6 696 aa18.83■□□□□ 0.6
ABCA3-206ENST00000569062 MRPS33Q9Y291 106 aaKnown RBP18.83■□□□□ 0.6
ABCA3-206ENST00000569062 EXOC1LA0A1B0GW35 172 aa18.82■□□□□ 0.6
ABCA3-206ENST00000569062 RBP1P09455 135 aa18.82■□□□□ 0.6
ABCA3-206ENST00000569062 FAM153BP0C7A2 387 aa18.82■□□□□ 0.6
ABCA3-206ENST00000569062 CNTFP26441 200 aa18.82■□□□□ 0.6
ABCA3-206ENST00000569062 GCAP28676 217 aa18.82■□□□□ 0.6
ABCA3-206ENST00000569062 EEF1DP29692 281 aaKnown RBP18.82■□□□□ 0.6
ABCA3-206ENST00000569062 SERPINB1P30740 379 aa18.82■□□□□ 0.6
ABCA3-206ENST00000569062 TDGF1P3P51864 188 aa18.82■□□□□ 0.6
ABCA3-206ENST00000569062 PMP22Q01453 160 aa18.82■□□□□ 0.6
ABCA3-206ENST00000569062 OR1C1Q15619 314 aa18.82■□□□□ 0.6
ABCA3-206ENST00000569062 FAM153CQ494X1 144 aa18.82■□□□□ 0.6
ABCA3-206ENST00000569062 TMEM35AQ53FP2 167 aa18.82■□□□□ 0.6
ABCA3-206ENST00000569062 DEPDC1Q5TB30 811 aa18.82■□□□□ 0.6
ABCA3-206ENST00000569062 ZNF468Q5VIY5 522 aaPredicted RBP18.82■□□□□ 0.6
ABCA3-206ENST00000569062 KHDRBS2Q5VWX1 349 aaKnown RBP18.82■□□□□ 0.6
ABCA3-206ENST00000569062 CHSY3Q70JA7 882 aa18.82■□□□□ 0.6
ABCA3-206ENST00000569062 APCDD1LQ8NCL9 501 aa18.82■□□□□ 0.6
ABCA3-206ENST00000569062 B3GNT7Q8NFL0 401 aa18.82■□□□□ 0.6
ABCA3-206ENST00000569062 NR4A3Q92570 626 aa18.82■□□□□ 0.6
ABCA3-206ENST00000569062 SCYL1Q96KG9 808 aa18.82■□□□□ 0.6
ABCA3-206ENST00000569062 MTERF1Q99551 399 aaKnown RBP18.82■□□□□ 0.6
ABCA3-206ENST00000569062 ROGDIQ9GZN7 287 aa18.82■□□□□ 0.6
ABCA3-206ENST00000569062 DMRT3Q9NQL9 472 aa18.82■□□□□ 0.6
ABCA3-206ENST00000569062 KLHL1Q9NR64 748 aa18.82■□□□□ 0.6
ABCA3-206ENST00000569062 RNF11Q9Y3C5 154 aa18.82■□□□□ 0.6
ABCA3-206ENST00000569062 TNPO3Q9Y5L0 923 aaKnown RBP18.82■□□□□ 0.6
ABCA3-206ENST00000569062 ABHD2P08910 425 aa18.81■□□□□ 0.6
ABCA3-206ENST00000569062 MYBL2P10244 700 aa18.81■□□□□ 0.6
ABCA3-206ENST00000569062 HIST1H1TP22492 207 aaPredicted RBP18.81■□□□□ 0.6
ABCA3-206ENST00000569062 TPP2P29144 1249 aaPredicted RBP18.81■□□□□ 0.6
ABCA3-206ENST00000569062 PIK3CBP42338 1070 aa18.81■□□□□ 0.6
ABCA3-206ENST00000569062 SSR2P43308 183 aa18.81■□□□□ 0.6
ABCA3-206ENST00000569062 RPS13P62277 151 aaKnown RBP18.81■□□□□ 0.6
ABCA3-206ENST00000569062 OC90Q02509 493 aaPredicted RBP18.81■□□□□ 0.6
ABCA3-206ENST00000569062 CPSF6Q16630 551 aaKnown RBP eCLIP18.81■□□□□ 0.6
ABCA3-206ENST00000569062 AP5B1Q2VPB7 878 aa18.81■□□□□ 0.6
ABCA3-206ENST00000569062 LGI4Q8N135 537 aa18.81■□□□□ 0.6
ABCA3-206ENST00000569062 CDK15Q96Q40 435 aa18.81■□□□□ 0.6
ABCA3-206ENST00000569062 DEFB126Q9BYW3 111 aa18.81■□□□□ 0.6
ABCA3-206ENST00000569062 NOL11Q9H8H0 719 aaKnown RBP18.81■□□□□ 0.6
ABCA3-206ENST00000569062 LYRM4Q9HD34 91 aa18.81■□□□□ 0.6
ABCA3-206ENST00000569062 ADGRE2Q9UHX3 823 aa18.81■□□□□ 0.6
ABCA3-206ENST00000569062 ZNF223Q9UK11 482 aaPredicted RBP18.81■□□□□ 0.6
ABCA3-206ENST00000569062 FBXW2Q9UKT8 454 aa18.81■□□□□ 0.6
ABCA3-206ENST00000569062 OSGIN2Q9Y236 505 aa18.81■□□□□ 0.6
ABCA3-206ENST00000569062 TSC22D4Q9Y3Q8 395 aa18.81■□□□□ 0.6
ABCA3-206ENST00000569062 PCDHGA11Q9Y5H2 935 aa18.81■□□□□ 0.6
ABCA3-206ENST00000569062 TRBV11-1A0A0K0K1C0 115 aa18.8■□□□□ 0.6
ABCA3-206ENST00000569062 H0YIV9 168 aa18.8■□□□□ 0.6
ABCA3-206ENST00000569062 OR7A17O14581 309 aa18.8■□□□□ 0.6
ABCA3-206ENST00000569062 RIPK2O43353 540 aa18.8■□□□□ 0.6
ABCA3-206ENST00000569062 UGDHO60701 494 aa18.8■□□□□ 0.6
ABCA3-206ENST00000569062 CTNSO60931 367 aa18.8■□□□□ 0.6
ABCA3-206ENST00000569062 LDB3O75112 727 aa18.8■□□□□ 0.6
ABCA3-206ENST00000569062 NEURL1O76050 574 aa18.8■□□□□ 0.6
ABCA3-206ENST00000569062 SCELO95171 688 aa18.8■□□□□ 0.6
ABCA3-206ENST00000569062 SNRPAP09012 282 aaKnown RBP18.8■□□□□ 0.6
ABCA3-206ENST00000569062 COL6A2P12110 1019 aa18.8■□□□□ 0.6
ABCA3-206ENST00000569062 MST1P26927 711 aa18.8■□□□□ 0.6
ABCA3-206ENST00000569062 PIK3CGP48736 1102 aa18.8■□□□□ 0.6
ABCA3-206ENST00000569062 CLCN2P51788 898 aa18.8■□□□□ 0.6
ABCA3-206ENST00000569062 GPR143P51810 404 aa18.8■□□□□ 0.6
ABCA3-206ENST00000569062 MLF1P58340 268 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms