RNA–Protein interactions for RNA: ENST00000568881.1

NEIL1-220, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 3

Gene NEIL1, Length 587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-220ENST00000568881 A0A1B0GTL3 188 aa12.98□□□□□ -0.33
NEIL1-220ENST00000568881 LRIT2A6NDA9 550 aa12.98□□□□□ -0.33
NEIL1-220ENST00000568881 SGK494L7N484 410 aa12.98□□□□□ -0.33
NEIL1-220ENST00000568881 PSMD12O00232 456 aaPredicted RBP12.98□□□□□ -0.33
NEIL1-220ENST00000568881 FOXE1O00358 373 aaPredicted RBP12.98□□□□□ -0.33
NEIL1-220ENST00000568881 UBFD1O14562 309 aaKnown RBP12.98□□□□□ -0.33
NEIL1-220ENST00000568881 ALOX12BO75342 701 aa12.98□□□□□ -0.33
NEIL1-220ENST00000568881 PDGFAP04085 211 aa12.98□□□□□ -0.33
NEIL1-220ENST00000568881 SERPINE1P05121 402 aa12.98□□□□□ -0.33
NEIL1-220ENST00000568881 PTX3P26022 381 aaPredicted RBP12.98□□□□□ -0.33
NEIL1-220ENST00000568881 MAT1AQ00266 395 aaKnown RBP12.98□□□□□ -0.33
NEIL1-220ENST00000568881 TMEM35AQ53FP2 167 aa12.98□□□□□ -0.33
NEIL1-220ENST00000568881 ARL13AQ5H913 290 aaPredicted RBP12.98□□□□□ -0.33
NEIL1-220ENST00000568881 TOR1AIP1Q5JTV8 583 aa12.98□□□□□ -0.33
NEIL1-220ENST00000568881 ADNP2Q6IQ32 1131 aa12.98□□□□□ -0.33
NEIL1-220ENST00000568881 IGFL3Q6UXB1 125 aa12.98□□□□□ -0.33
NEIL1-220ENST00000568881 RIPOR1Q6ZS17 1223 aa12.98□□□□□ -0.33
NEIL1-220ENST00000568881 VN1R5Q7Z5H4 357 aa12.98□□□□□ -0.33
NEIL1-220ENST00000568881 ZC3H7AQ8IWR0 971 aaKnown RBP12.98□□□□□ -0.33
NEIL1-220ENST00000568881 PARP9Q8IXQ6 854 aa12.98□□□□□ -0.33
NEIL1-220ENST00000568881 SRFBP1Q8NEF9 429 aaKnown RBP12.98□□□□□ -0.33
NEIL1-220ENST00000568881 WDR20Q8TBZ3 569 aa12.98□□□□□ -0.33
NEIL1-220ENST00000568881 PNPLA2Q96AD5 504 aa12.98□□□□□ -0.33
NEIL1-220ENST00000568881 MTFMTQ96DP5 389 aaKnown RBP12.98□□□□□ -0.33
NEIL1-220ENST00000568881 THOC3Q96J01 351 aaKnown RBP12.98□□□□□ -0.33
NEIL1-220ENST00000568881 TUBB6Q9BUF5 446 aa12.98□□□□□ -0.33
NEIL1-220ENST00000568881 SHCBP1LQ9BZQ2 653 aa12.98□□□□□ -0.33
NEIL1-220ENST00000568881 REXO4Q9GZR2 422 aaKnown RBP12.98□□□□□ -0.33
NEIL1-220ENST00000568881 CLMPQ9H6B4 373 aa12.98□□□□□ -0.33
NEIL1-220ENST00000568881 ZNF552Q9H707 407 aaPredicted RBP12.98□□□□□ -0.33
NEIL1-220ENST00000568881 ZNF160Q9HCG1 818 aa12.98□□□□□ -0.33
NEIL1-220ENST00000568881 DMRT3Q9NQL9 472 aa12.98□□□□□ -0.33
NEIL1-220ENST00000568881 PSD3Q9NYI0 1048 aa12.98□□□□□ -0.33
NEIL1-220ENST00000568881 HCN3Q9P1Z3 774 aa12.98□□□□□ -0.33
NEIL1-220ENST00000568881 ZNF225Q9UK10 706 aa12.98□□□□□ -0.33
NEIL1-220ENST00000568881 HELZ2Q9BYK8 2649 aaKnown RBP12.98□□□□□ -0.33
NEIL1-220ENST00000568881 CCDC88CQ9P219 2028 aa12.98□□□□□ -0.33
NEIL1-220ENST00000568881 A0A1W2PQ72 361 aa12.97□□□□□ -0.33
NEIL1-220ENST00000568881 MAGEB17A8MXT2 336 aa12.97□□□□□ -0.33
NEIL1-220ENST00000568881 TMEM114B3SHH9 223 aa12.97□□□□□ -0.33
NEIL1-220ENST00000568881 MASP2O00187 686 aa12.97□□□□□ -0.33
NEIL1-220ENST00000568881 MANBAO00462 879 aa12.97□□□□□ -0.33
NEIL1-220ENST00000568881 GALR3O60755 368 aaPredicted RBP12.97□□□□□ -0.33
NEIL1-220ENST00000568881 ULK1O75385 1050 aa12.97□□□□□ -0.33
NEIL1-220ENST00000568881 RDH16O75452 317 aa12.97□□□□□ -0.33
NEIL1-220ENST00000568881 SNUPNO95149 360 aaKnown RBP12.97□□□□□ -0.33
NEIL1-220ENST00000568881 TGFB1P01137 390 aa12.97□□□□□ -0.33
NEIL1-220ENST00000568881 CHRNGP07510 517 aa12.97□□□□□ -0.33
NEIL1-220ENST00000568881 ZNF888P0CJ79 500 aaPredicted RBP12.97□□□□□ -0.33
NEIL1-220ENST00000568881 UROSP10746 265 aa12.97□□□□□ -0.33
NEIL1-220ENST00000568881 BGNP21810 368 aa12.97□□□□□ -0.33
NEIL1-220ENST00000568881 NEK2P51955 445 aa12.97□□□□□ -0.33
NEIL1-220ENST00000568881 ZNF33BQ06732 778 aa12.97□□□□□ -0.33
NEIL1-220ENST00000568881 HYAL2Q12891 473 aa12.97□□□□□ -0.33
NEIL1-220ENST00000568881 STX3Q13277 289 aa12.97□□□□□ -0.33
NEIL1-220ENST00000568881 SYT16Q17RD7 645 aa12.97□□□□□ -0.33
NEIL1-220ENST00000568881 ADPRMQ3LIE5 342 aa12.97□□□□□ -0.33
NEIL1-220ENST00000568881 DEFB134Q4QY38 66 aa12.97□□□□□ -0.33
NEIL1-220ENST00000568881 SGO1Q5FBB7 561 aa12.97□□□□□ -0.33
NEIL1-220ENST00000568881 FAAH2Q6GMR7 532 aa12.97□□□□□ -0.33
NEIL1-220ENST00000568881 JMJD6Q6NYC1 403 aaPredicted RBP12.97□□□□□ -0.33
NEIL1-220ENST00000568881 TRIM40Q6P9F5 258 aa12.97□□□□□ -0.33
NEIL1-220ENST00000568881 CUZD1Q86UP6 607 aa12.97□□□□□ -0.33
NEIL1-220ENST00000568881 LAPTM4BQ86VI4 370 aa12.97□□□□□ -0.33
NEIL1-220ENST00000568881 AFAP1L2Q8N4X5 818 aa12.97□□□□□ -0.33
NEIL1-220ENST00000568881 OR2L5Q8NG80 312 aa12.97□□□□□ -0.33
NEIL1-220ENST00000568881 OR6Y1Q8NGX8 325 aa12.97□□□□□ -0.33
NEIL1-220ENST00000568881 RAB3IL1Q8TBN0 382 aa12.97□□□□□ -0.33
NEIL1-220ENST00000568881 UTP15Q8TED0 518 aaKnown RBP12.97□□□□□ -0.33
NEIL1-220ENST00000568881 SELENOMQ8WWX9 145 aa12.97□□□□□ -0.33
NEIL1-220ENST00000568881 GAL3ST3Q96A11 431 aa12.97□□□□□ -0.33
NEIL1-220ENST00000568881 MS4A6EQ96DS6 147 aa12.97□□□□□ -0.33
NEIL1-220ENST00000568881 F2RL3Q96RI0 385 aa12.97□□□□□ -0.33
NEIL1-220ENST00000568881 MS4A8Q9BY19 250 aa12.97□□□□□ -0.33
NEIL1-220ENST00000568881 ILKAPQ9H0C8 392 aaPredicted RBP12.97□□□□□ -0.33
NEIL1-220ENST00000568881 KLHL31Q9H511 634 aa12.97□□□□□ -0.33
NEIL1-220ENST00000568881 NMRK1Q9NWW6 199 aa12.97□□□□□ -0.33
NEIL1-220ENST00000568881 TEKT2Q9UIF3 430 aa12.97□□□□□ -0.33
NEIL1-220ENST00000568881 PPT2Q9UMR5 302 aa12.97□□□□□ -0.33
NEIL1-220ENST00000568881 B3GNT3Q9Y2A9 372 aa12.97□□□□□ -0.33
NEIL1-220ENST00000568881 MRPS2Q9Y399 296 aaKnown RBP12.97□□□□□ -0.33
NEIL1-220ENST00000568881 NUP210LQ5VU65 1888 aa12.97□□□□□ -0.33
NEIL1-220ENST00000568881 LOC102723996A0A087X1L8 192 aa12.96□□□□□ -0.33
NEIL1-220ENST00000568881 IGHV1-45A0A0A0MS14 117 aa12.96□□□□□ -0.33
NEIL1-220ENST00000568881 SYNDIG1LA6NDD5 238 aa12.96□□□□□ -0.33
NEIL1-220ENST00000568881 AZIN1O14977 448 aa12.96□□□□□ -0.33
NEIL1-220ENST00000568881 ERI3O43414 337 aaKnown RBP12.96□□□□□ -0.33
NEIL1-220ENST00000568881 VPS4BO75351 444 aa12.96□□□□□ -0.33
NEIL1-220ENST00000568881 HSPA4LO95757 839 aa12.96□□□□□ -0.33
NEIL1-220ENST00000568881 CHEK2O96017 543 aa12.96□□□□□ -0.33
NEIL1-220ENST00000568881 SERPINA7P05543 415 aa12.96□□□□□ -0.33
NEIL1-220ENST00000568881 COX6A1P12074 109 aa12.96□□□□□ -0.33
NEIL1-220ENST00000568881 RNH1P13489 461 aaKnown RBP12.96□□□□□ -0.33
NEIL1-220ENST00000568881 HNRNPH1P31943 449 aaKnown RBP12.96□□□□□ -0.33
NEIL1-220ENST00000568881 RAP1GDS1P52306 607 aa12.96□□□□□ -0.33
NEIL1-220ENST00000568881 RAB8AP61006 207 aa12.96□□□□□ -0.33
NEIL1-220ENST00000568881 ABCE1P61221 599 aaKnown RBP12.96□□□□□ -0.33
NEIL1-220ENST00000568881 RPS13P62277 151 aaKnown RBP12.96□□□□□ -0.33
NEIL1-220ENST00000568881 EEF1A2Q05639 463 aaKnown RBP12.96□□□□□ -0.33
NEIL1-220ENST00000568881 CUL3Q13618 768 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms