RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 B3GNT7Q8NFL0 401 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 UBE2E3Q969T4 207 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 ESAMQ96AP7 390 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 SCMH1Q96GD3 660 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 QRFPRQ96P65 431 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 SIGLEC12Q96PQ1 595 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 KCNC2Q96PR1 638 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 SERINC2Q96SA4 455 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 NPAS2Q99743 824 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 UTP23Q9BRU9 249 aaKnown RBP4.48□□□□□ -1.69
CLK3-219ENST00000567805 ROGDIQ9GZN7 287 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 CDCP1Q9H5V8 836 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 COPS7BQ9H9Q2 264 aaPredicted RBP4.48□□□□□ -1.69
CLK3-219ENST00000567805 NECTIN3Q9NQS3 549 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 PRTFDC1Q9NRG1 225 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 IGSF5Q9NSI5 407 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 OPTCQ9UBM4 332 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 ADGRE2Q9UHX3 823 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 ZNF490Q9ULM2 529 aaPredicted RBP4.48□□□□□ -1.69
CLK3-219ENST00000567805 DAPP1Q9UN19 280 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 OSGIN2Q9Y236 505 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 ADGRG4Q8IZF6 3080 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 DCHS2Q6V1P9 2916 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 A0A096LPK6 155 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 A1L4Q6 167 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 HMX2A2RU54 273 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 ASPDHA6ND91 283 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 KIF2AO00139 706 aaPredicted RBP4.47□□□□□ -1.69
CLK3-219ENST00000567805 CYR61O00622 381 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 LRRTM2O43300 516 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 KLK8O60259 260 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 MAN1A2O60476 641 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 UGDHO60701 494 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 NEURL1O76050 574 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 MYO1DO94832 1006 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 SCELO95171 688 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 UNC5CO95185 931 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 MLYCDO95822 493 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 CLDN1O95832 211 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 ALDOAP04075 364 aaKnown RBP4.47□□□□□ -1.69
CLK3-219ENST00000567805 SP1P08047 785 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 FBXO45P0C2W1 286 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 PCNAP12004 261 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 MTHFD2P13995 350 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 GFAPP14136 432 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 SNRPBP14678 240 aaKnown RBP4.47□□□□□ -1.69
CLK3-219ENST00000567805 HIST1H1TP22492 207 aaPredicted RBP4.47□□□□□ -1.69
CLK3-219ENST00000567805 ATP5A1P25705 553 aaKnown RBP4.47□□□□□ -1.69
CLK3-219ENST00000567805 CNTFP26441 200 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 MST1P26927 711 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 CERS1P27544 350 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 TPP2P29144 1249 aaPredicted RBP4.47□□□□□ -1.69
CLK3-219ENST00000567805 TYK2P29597 1187 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 EEF1DP29692 281 aaKnown RBP4.47□□□□□ -1.69
CLK3-219ENST00000567805 TRHRP34981 398 aaPredicted RBP4.47□□□□□ -1.69
CLK3-219ENST00000567805 PIK3CBP42338 1070 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 MSH2P43246 934 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 PIK3CGP48736 1102 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 CYB561P49447 251 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 SERPINB8P50452 374 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 CLCN2P51788 898 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 HNRNPFP52597 415 aaKnown RBP4.47□□□□□ -1.69
CLK3-219ENST00000567805 ARFIP1P53367 373 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 ALDH18A1P54886 795 aaKnown RBP4.47□□□□□ -1.69
CLK3-219ENST00000567805 KCNK10P57789 538 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 MLF1P58340 268 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 IRF9Q00978 393 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 PMP22Q01453 160 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 OC90Q02509 493 aaPredicted RBP4.47□□□□□ -1.69
CLK3-219ENST00000567805 RBPJQ06330 500 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 GTF3C1Q12789 2109 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 SLC13A2Q13183 592 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 BMPR2Q13873 1038 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 SERTAD2Q14140 314 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 NAA30Q147X3 362 aaPredicted RBP4.47□□□□□ -1.69
CLK3-219ENST00000567805 SETDB1Q15047 1291 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 ELAVL1Q15717 326 aaKnown RBP4.47□□□□□ -1.69
CLK3-219ENST00000567805 UAP1Q16222 522 aaPredicted RBP4.47□□□□□ -1.69
CLK3-219ENST00000567805 PFKFB4Q16877 469 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.47□□□□□ -1.69
CLK3-219ENST00000567805 GLE1Q53GS7 698 aaKnown RBP4.47□□□□□ -1.69
CLK3-219ENST00000567805 LIPJQ5W064 366 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 SPINK14Q6IE38 97 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 ADNP2Q6IQ32 1131 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 GRHL2Q6ISB3 625 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 METTL2BQ6P1Q9 378 aaKnown RBP4.47□□□□□ -1.69
CLK3-219ENST00000567805 GFRALQ6UXV0 394 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 CHSY3Q70JA7 882 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 TAOK1Q7L7X3 1001 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 RETREG3Q86VR2 466 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 TMEM132CQ8N3T6 1108 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 KIF2BQ8N4N8 673 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 TEX9Q8N6V9 391 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 FAM47BQ8NA70 645 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 NOA1Q8NC60 698 aaKnown RBP4.47□□□□□ -1.69
CLK3-219ENST00000567805 APCDD1LQ8NCL9 501 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 TMEM52Q8NDY8 209 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 C7orf57Q8NEG2 295 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 NFAM1Q8NET5 270 aaPredicted RBP4.47□□□□□ -1.69
CLK3-219ENST00000567805 OR7G3Q8NG95 312 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms