RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 PINK1Q9BXM7 581 aa3.89□□□□□ -1.79
SHCBP1-206ENST00000567698 MTIF3Q9H2K0 278 aaKnown RBP3.89□□□□□ -1.79
SHCBP1-206ENST00000567698 GNB4Q9HAV0 340 aa3.89□□□□□ -1.79
SHCBP1-206ENST00000567698 MAGEF1Q9HAY2 307 aa3.89□□□□□ -1.79
SHCBP1-206ENST00000567698 CWC25Q9NXE8 425 aaPredicted RBP3.89□□□□□ -1.79
SHCBP1-206ENST00000567698 ZNF510Q9Y2H8 683 aa3.89□□□□□ -1.79
SHCBP1-206ENST00000567698 IGLV4-3A0A075B6K6 122 aa3.88□□□□□ -1.79
SHCBP1-206ENST00000567698 TMEM129A0AVI4 362 aa3.88□□□□□ -1.79
SHCBP1-206ENST00000567698 FAM149AA5PLN7 773 aa3.88□□□□□ -1.79
SHCBP1-206ENST00000567698 CCER2I3L3R5 266 aa3.88□□□□□ -1.79
SHCBP1-206ENST00000567698 KINO60870 393 aaKnown RBP3.88□□□□□ -1.79
SHCBP1-206ENST00000567698 OR6B1O95007 311 aa3.88□□□□□ -1.79
SHCBP1-206ENST00000567698 CALCAP01258 141 aa3.88□□□□□ -1.79
SHCBP1-206ENST00000567698 NUDT17P0C025 328 aa3.88□□□□□ -1.79
SHCBP1-206ENST00000567698 SKILP12757 684 aa3.88□□□□□ -1.79
SHCBP1-206ENST00000567698 GLRA1P23415 457 aa3.88□□□□□ -1.79
SHCBP1-206ENST00000567698 CASP3P42574 277 aa3.88□□□□□ -1.79
SHCBP1-206ENST00000567698 TNFSF10P50591 281 aa3.88□□□□□ -1.79
SHCBP1-206ENST00000567698 CCR4P51679 360 aa3.88□□□□□ -1.79
SHCBP1-206ENST00000567698 CRYBA2P53672 197 aa3.88□□□□□ -1.79
SHCBP1-206ENST00000567698 NME5P56597 212 aa3.88□□□□□ -1.79
SHCBP1-206ENST00000567698 ERVK-16P61578 105 aa3.88□□□□□ -1.79
SHCBP1-206ENST00000567698 CD300CQ08708 224 aa3.88□□□□□ -1.79
SHCBP1-206ENST00000567698 RIGQ13278 110 aa3.88□□□□□ -1.79
SHCBP1-206ENST00000567698 MORF4L2Q15014 288 aa3.88□□□□□ -1.79
SHCBP1-206ENST00000567698 KNOP1Q1ED39 458 aaKnown RBP3.88□□□□□ -1.79
SHCBP1-206ENST00000567698 KRTAP27-1Q3LI81 207 aa3.88□□□□□ -1.79
SHCBP1-206ENST00000567698 FUT11Q495W5 492 aa3.88□□□□□ -1.79
SHCBP1-206ENST00000567698 RFPL4BQ6ZWI9 263 aa3.88□□□□□ -1.79
SHCBP1-206ENST00000567698 KCNMB4Q86W47 210 aa3.88□□□□□ -1.79
SHCBP1-206ENST00000567698 NAT8LQ8N9F0 302 aa3.88□□□□□ -1.79
SHCBP1-206ENST00000567698 C17orf47Q8NEP4 570 aa3.88□□□□□ -1.79
SHCBP1-206ENST00000567698 OR52B6Q8NGF0 335 aa3.88□□□□□ -1.79
SHCBP1-206ENST00000567698 SLC45A3Q96JT2 553 aa3.88□□□□□ -1.79
SHCBP1-206ENST00000567698 SSX3Q99909 188 aa3.88□□□□□ -1.79
SHCBP1-206ENST00000567698 NTMT1Q9BV86 223 aa3.88□□□□□ -1.79
SHCBP1-206ENST00000567698 VIPAS39Q9H9C1 493 aa3.88□□□□□ -1.79
SHCBP1-206ENST00000567698 DNAJC11Q9NVH1 559 aa3.88□□□□□ -1.79
SHCBP1-206ENST00000567698 MUTYHQ9UIF7 546 aa3.88□□□□□ -1.79
SHCBP1-206ENST00000567698 ZHX2Q9Y6X8 837 aa3.88□□□□□ -1.79
SHCBP1-206ENST00000567698 UMODL1Q5DID0 1318 aa3.88□□□□□ -1.79
SHCBP1-206ENST00000567698 A0A0U1RQG5 324 aaPredicted RBP3.87□□□□□ -1.79
SHCBP1-206ENST00000567698 SRRM5B3KS81 715 aa3.87□□□□□ -1.79
SHCBP1-206ENST00000567698 CHUKO15111 745 aa3.87□□□□□ -1.79
SHCBP1-206ENST00000567698 ZNF749O43361 778 aa3.87□□□□□ -1.79
SHCBP1-206ENST00000567698 B4GAT1O43505 415 aa3.87□□□□□ -1.79
SHCBP1-206ENST00000567698 RTN2O75298 545 aa3.87□□□□□ -1.79
SHCBP1-206ENST00000567698 PKLRP30613 574 aa3.87□□□□□ -1.79
SHCBP1-206ENST00000567698 UCP2P55851 309 aa3.87□□□□□ -1.79
SHCBP1-206ENST00000567698 RPS6KA1Q15418 735 aa3.87□□□□□ -1.79
SHCBP1-206ENST00000567698 SPHARQ15513 63 aa3.87□□□□□ -1.79
SHCBP1-206ENST00000567698 LYPLAL1Q5VWZ2 237 aa3.87□□□□□ -1.79
SHCBP1-206ENST00000567698 CAPN13Q6MZZ7 669 aaPredicted RBP3.87□□□□□ -1.79
SHCBP1-206ENST00000567698 Q71RC1 249 aaPredicted RBP3.87□□□□□ -1.79
SHCBP1-206ENST00000567698 WDR49Q8IV35 697 aa3.87□□□□□ -1.79
SHCBP1-206ENST00000567698 ABHD12Q8N2K0 398 aa3.87□□□□□ -1.79
SHCBP1-206ENST00000567698 TMCO5AQ8N6Q1 288 aa3.87□□□□□ -1.79
SHCBP1-206ENST00000567698 CLEC1AQ8NC01 280 aa3.87□□□□□ -1.79
SHCBP1-206ENST00000567698 TRPV3Q8NET8 790 aa3.87□□□□□ -1.79
SHCBP1-206ENST00000567698 SPATA18Q8TC71 538 aa3.87□□□□□ -1.79
SHCBP1-206ENST00000567698 DDX50Q9BQ39 737 aaKnown RBP3.87□□□□□ -1.79
SHCBP1-206ENST00000567698 ZNF577Q9BSK1 485 aa3.87□□□□□ -1.79
SHCBP1-206ENST00000567698 LRRC2Q9BYS8 371 aa3.87□□□□□ -1.79
SHCBP1-206ENST00000567698 SLC5A7Q9GZV3 580 aa3.87□□□□□ -1.79
SHCBP1-206ENST00000567698 TSPYL1Q9H0U9 437 aa3.87□□□□□ -1.79
SHCBP1-206ENST00000567698 ZNF319Q9P2F9 582 aa3.87□□□□□ -1.79
SHCBP1-206ENST00000567698 A0A1W2PRV1 198 aa3.86□□□□□ -1.79
SHCBP1-206ENST00000567698 ASB14A6NK59 587 aa3.86□□□□□ -1.79
SHCBP1-206ENST00000567698 ZNF724A8MTY0 619 aa3.86□□□□□ -1.79
SHCBP1-206ENST00000567698 CSDE1O75534 798 aaKnown RBP3.86□□□□□ -1.79
SHCBP1-206ENST00000567698 PRDM1O75626 825 aa3.86□□□□□ -1.79
SHCBP1-206ENST00000567698 EPOP01588 193 aa3.86□□□□□ -1.79
SHCBP1-206ENST00000567698 SBK2P0C263 348 aa3.86□□□□□ -1.79
SHCBP1-206ENST00000567698 PCP11498 1178 aaKnown RBP3.86□□□□□ -1.79
SHCBP1-206ENST00000567698 B4GALT1P15291 398 aa3.86□□□□□ -1.79
SHCBP1-206ENST00000567698 GATA2P23769 480 aaPredicted RBP3.86□□□□□ -1.79
SHCBP1-206ENST00000567698 FCGR2BP31994 310 aaPredicted RBP3.86□□□□□ -1.79
SHCBP1-206ENST00000567698 FCGR2CP31995 323 aa3.86□□□□□ -1.79
SHCBP1-206ENST00000567698 FHITP49789 147 aa3.86□□□□□ -1.79
SHCBP1-206ENST00000567698 ATP4BP51164 291 aa3.86□□□□□ -1.79
SHCBP1-206ENST00000567698 NDUFV3P56181 108 aaKnown RBP3.86□□□□□ -1.79
SHCBP1-206ENST00000567698 KIAA1024LP59773 190 aa3.86□□□□□ -1.79
SHCBP1-206ENST00000567698 GK2Q14410 553 aaPredicted RBP3.86□□□□□ -1.79
SHCBP1-206ENST00000567698 MEF2DQ14814 521 aa3.86□□□□□ -1.79
SHCBP1-206ENST00000567698 HFEQ30201 348 aa3.86□□□□□ -1.79
SHCBP1-206ENST00000567698 MS4A18Q3C1V0 323 aa3.86□□□□□ -1.79
SHCBP1-206ENST00000567698 GTSCR1Q86UQ5 136 aa3.86□□□□□ -1.79
SHCBP1-206ENST00000567698 TMEM126BQ8IUX1 230 aa3.86□□□□□ -1.79
SHCBP1-206ENST00000567698 ZNF713Q8N859 430 aaPredicted RBP3.86□□□□□ -1.79
SHCBP1-206ENST00000567698 ZNRF1Q8ND25 227 aa3.86□□□□□ -1.79
SHCBP1-206ENST00000567698 MRPL9Q9BYD2 267 aaKnown RBP3.86□□□□□ -1.79
SHCBP1-206ENST00000567698 CXXC4Q9H2H0 198 aa3.86□□□□□ -1.79
SHCBP1-206ENST00000567698 TUBB1Q9H4B7 451 aa3.86□□□□□ -1.79
SHCBP1-206ENST00000567698 S100A14Q9HCY8 104 aa3.86□□□□□ -1.79
SHCBP1-206ENST00000567698 FAM212BQ9NTI7 297 aaPredicted RBP3.86□□□□□ -1.79
SHCBP1-206ENST00000567698 STX8Q9UNK0 236 aa3.86□□□□□ -1.79
SHCBP1-206ENST00000567698 FOXA2Q9Y261 457 aaPredicted RBP3.86□□□□□ -1.79
SHCBP1-206ENST00000567698 OR1A2Q9Y585 309 aa3.86□□□□□ -1.79
SHCBP1-206ENST00000567698 GON4LQ3T8J9 2241 aa3.85□□□□□ -1.79
SHCBP1-206ENST00000567698 SLC15A5A6NIM6 579 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms