RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 CYR61O00622 381 aa6.47□□□□□ -1.37
SF3B3-209ENST00000567635 E2F3O00716 465 aa6.47□□□□□ -1.37
SF3B3-209ENST00000567635 LRRTM2O43300 516 aa6.47□□□□□ -1.37
SF3B3-209ENST00000567635 MAN1A2O60476 641 aa6.47□□□□□ -1.37
SF3B3-209ENST00000567635 CTNSO60931 367 aa6.47□□□□□ -1.37
SF3B3-209ENST00000567635 KLHL2O95198 593 aa6.47□□□□□ -1.37
SF3B3-209ENST00000567635 ACSL3O95573 720 aa6.47□□□□□ -1.37
SF3B3-209ENST00000567635 TBX6O95947 436 aaPredicted RBP6.47□□□□□ -1.37
SF3B3-209ENST00000567635 LDLRP01130 860 aa6.47□□□□□ -1.37
SF3B3-209ENST00000567635 TGFB1P01137 390 aa6.47□□□□□ -1.37
SF3B3-209ENST00000567635 ALDOAP04075 364 aaKnown RBP6.47□□□□□ -1.37
SF3B3-209ENST00000567635 SP1P08047 785 aa6.47□□□□□ -1.37
SF3B3-209ENST00000567635 INHBAP08476 426 aa6.47□□□□□ -1.37
SF3B3-209ENST00000567635 PCNAP12004 261 aa6.47□□□□□ -1.37
SF3B3-209ENST00000567635 MTHFD2P13995 350 aa6.47□□□□□ -1.37
SF3B3-209ENST00000567635 GFAPP14136 432 aa6.47□□□□□ -1.37
SF3B3-209ENST00000567635 CD46P15529 392 aa6.47□□□□□ -1.37
SF3B3-209ENST00000567635 ATP5A1P25705 553 aaKnown RBP6.47□□□□□ -1.37
SF3B3-209ENST00000567635 SERPINB1P30740 379 aa6.47□□□□□ -1.37
SF3B3-209ENST00000567635 MSH2P43246 934 aa6.47□□□□□ -1.37
SF3B3-209ENST00000567635 SERPINB8P50452 374 aa6.47□□□□□ -1.37
SF3B3-209ENST00000567635 SERPINB9P50453 376 aa6.47□□□□□ -1.37
SF3B3-209ENST00000567635 ALDH18A1P54886 795 aaKnown RBP6.47□□□□□ -1.37
SF3B3-209ENST00000567635 LIM2P55344 173 aa6.47□□□□□ -1.37
SF3B3-209ENST00000567635 MLF1P58340 268 aa6.47□□□□□ -1.37
SF3B3-209ENST00000567635 CBX1P83916 185 aa6.47□□□□□ -1.37
SF3B3-209ENST00000567635 IRF9Q00978 393 aa6.47□□□□□ -1.37
SF3B3-209ENST00000567635 OC90Q02509 493 aaPredicted RBP6.47□□□□□ -1.37
SF3B3-209ENST00000567635 SLC13A2Q13183 592 aa6.47□□□□□ -1.37
SF3B3-209ENST00000567635 BMPR2Q13873 1038 aa6.47□□□□□ -1.37
SF3B3-209ENST00000567635 SETDB1Q15047 1291 aa6.47□□□□□ -1.37
SF3B3-209ENST00000567635 TERF2Q15554 542 aa6.47□□□□□ -1.37
SF3B3-209ENST00000567635 OR1C1Q15619 314 aa6.47□□□□□ -1.37
SF3B3-209ENST00000567635 PFKFB4Q16877 469 aa6.47□□□□□ -1.37
SF3B3-209ENST00000567635 AP5B1Q2VPB7 878 aa6.47□□□□□ -1.37
SF3B3-209ENST00000567635 C4orf17Q53FE4 359 aa6.47□□□□□ -1.37
SF3B3-209ENST00000567635 SPINK14Q6IE38 97 aa6.47□□□□□ -1.37
SF3B3-209ENST00000567635 ADNP2Q6IQ32 1131 aa6.47□□□□□ -1.37
SF3B3-209ENST00000567635 METTL2BQ6P1Q9 378 aaKnown RBP6.47□□□□□ -1.37
SF3B3-209ENST00000567635 UBE3DQ7Z6J8 389 aa6.47□□□□□ -1.37
SF3B3-209ENST00000567635 SCUBE1Q8IWY4 988 aa6.47□□□□□ -1.37
SF3B3-209ENST00000567635 LAS2Q8IYD9 372 aa6.47□□□□□ -1.37
SF3B3-209ENST00000567635 KIF2BQ8N4N8 673 aa6.47□□□□□ -1.37
SF3B3-209ENST00000567635 ACOT4Q8N9L9 421 aa6.47□□□□□ -1.37
SF3B3-209ENST00000567635 MDS2Q8NDY4 140 aa6.47□□□□□ -1.37
SF3B3-209ENST00000567635 OR7G3Q8NG95 312 aa6.47□□□□□ -1.37
SF3B3-209ENST00000567635 ADAMTS18Q8TE60 1221 aa6.47□□□□□ -1.37
SF3B3-209ENST00000567635 ZNF473Q8WTR7 871 aaKnown RBP6.47□□□□□ -1.37
SF3B3-209ENST00000567635 SLC44A1Q8WWI5 657 aa6.47□□□□□ -1.37
SF3B3-209ENST00000567635 NR4A3Q92570 626 aa6.47□□□□□ -1.37
SF3B3-209ENST00000567635 RGMAQ96B86 450 aa6.47□□□□□ -1.37
SF3B3-209ENST00000567635 CMTM7Q96FZ5 175 aa6.47□□□□□ -1.37
SF3B3-209ENST00000567635 GPR78Q96P69 363 aa6.47□□□□□ -1.37
SF3B3-209ENST00000567635 KCNC2Q96PR1 638 aa6.47□□□□□ -1.37
SF3B3-209ENST00000567635 FMO2Q99518 471 aa6.47□□□□□ -1.37
SF3B3-209ENST00000567635 NPAS2Q99743 824 aa6.47□□□□□ -1.37
SF3B3-209ENST00000567635 FUT8Q9BYC5 575 aa6.47□□□□□ -1.37
SF3B3-209ENST00000567635 DEFB126Q9BYW3 111 aa6.47□□□□□ -1.37
SF3B3-209ENST00000567635 VPS11Q9H270 941 aa6.47□□□□□ -1.37
SF3B3-209ENST00000567635 YY1AP1Q9H869 796 aa6.47□□□□□ -1.37
SF3B3-209ENST00000567635 COPS7BQ9H9Q2 264 aaPredicted RBP6.47□□□□□ -1.37
SF3B3-209ENST00000567635 LYRM4Q9HD34 91 aa6.47□□□□□ -1.37
SF3B3-209ENST00000567635 PRTFDC1Q9NRG1 225 aa6.47□□□□□ -1.37
SF3B3-209ENST00000567635 ANKRD10Q9NXR5 420 aa6.47□□□□□ -1.37
SF3B3-209ENST00000567635 ERRFI1Q9UJM3 462 aaPredicted RBP6.47□□□□□ -1.37
SF3B3-209ENST00000567635 DAPP1Q9UN19 280 aa6.47□□□□□ -1.37
SF3B3-209ENST00000567635 PCDHGA11Q9Y5H2 935 aa6.47□□□□□ -1.37
SF3B3-209ENST00000567635 TNPO3Q9Y5L0 923 aaKnown RBP6.47□□□□□ -1.37
SF3B3-209ENST00000567635 ITPR2Q14571 2701 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 A0A087WUV0 522 aaPredicted RBP6.46□□□□□ -1.38
SF3B3-209ENST00000567635 A0A1B0GUH1 482 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 SYNDIG1LA6NDD5 238 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 LRRC14BA6NHZ5 514 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 GABRR3A8MPY1 467 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 VGLL3A8MV65 326 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 POC1B-GALNT4F8VUJ3 575 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 FCHO1O14526 889 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 KLK8O60259 260 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 SH3BGRLO75368 114 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 KRT38O76015 456 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 MYO1DO94832 1006 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 IFNA16P05015 189 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 STSP08842 583 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 RBP1P09455 135 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 RNF224P0DH78 156 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 COL6A2P12110 1019 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 PTX3P26022 381 aaPredicted RBP6.46□□□□□ -1.38
SF3B3-209ENST00000567635 CNTFP26441 200 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 MST1P26927 711 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 CERS1P27544 350 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 TPP2P29144 1249 aaPredicted RBP6.46□□□□□ -1.38
SF3B3-209ENST00000567635 EEF1DP29692 281 aaKnown RBP6.46□□□□□ -1.38
SF3B3-209ENST00000567635 PIK3CBP42338 1070 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 CYB561P49447 251 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 ST13P50502 369 aaKnown RBP6.46□□□□□ -1.38
SF3B3-209ENST00000567635 HLCSP50747 726 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 CLCN2P51788 898 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 TDGF1P3P51864 188 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 HNRNPFP52597 415 aaKnown RBP6.46□□□□□ -1.38
SF3B3-209ENST00000567635 PER3P56645 1201 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms