RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 MYBPC3Q14896 1274 aa12.69□□□□□ -0.38
CLK3-218ENST00000566926 TBCCQ15814 346 aa12.69□□□□□ -0.38
CLK3-218ENST00000566926 HIST2H2ACQ16777 129 aaPredicted RBP12.69□□□□□ -0.38
CLK3-218ENST00000566926 C18orf21Q32NC0 220 aaPredicted RBP12.69□□□□□ -0.38
CLK3-218ENST00000566926 PAGE2BQ5JRK9 111 aa12.69□□□□□ -0.38
CLK3-218ENST00000566926 VWA5B1Q5TIE3 1220 aa12.69□□□□□ -0.38
CLK3-218ENST00000566926 HIST2H2AA3Q6FI13 130 aa12.69□□□□□ -0.38
CLK3-218ENST00000566926 KIRREL2Q6UWL6 708 aa12.69□□□□□ -0.38
CLK3-218ENST00000566926 TMIGD1Q6UXZ0 262 aa12.69□□□□□ -0.38
CLK3-218ENST00000566926 SLCO4C1Q6ZQN7 724 aa12.69□□□□□ -0.38
CLK3-218ENST00000566926 MILR1Q7Z6M3 343 aa12.69□□□□□ -0.38
CLK3-218ENST00000566926 ZNF740Q8NDX6 193 aa12.69□□□□□ -0.38
CLK3-218ENST00000566926 FDCSPQ8NFU4 85 aa12.69□□□□□ -0.38
CLK3-218ENST00000566926 OR51Q1Q8NH59 317 aa12.69□□□□□ -0.38
CLK3-218ENST00000566926 METTL21AQ8WXB1 218 aa12.69□□□□□ -0.38
CLK3-218ENST00000566926 CCT6BQ92526 530 aa12.69□□□□□ -0.38
CLK3-218ENST00000566926 PTCD3Q96EY7 689 aaKnown RBP12.69□□□□□ -0.38
CLK3-218ENST00000566926 NSUN5Q96P11 429 aaKnown RBP12.69□□□□□ -0.38
CLK3-218ENST00000566926 MACROD1Q9BQ69 325 aa12.69□□□□□ -0.38
CLK3-218ENST00000566926 EFCAB11Q9BUY7 163 aa12.69□□□□□ -0.38
CLK3-218ENST00000566926 ACTR8Q9H981 624 aa12.69□□□□□ -0.38
CLK3-218ENST00000566926 MEAF6Q9HAF1 191 aa12.69□□□□□ -0.38
CLK3-218ENST00000566926 FBXL4Q9UKA2 621 aa12.69□□□□□ -0.38
CLK3-218ENST00000566926 MRPS2Q9Y399 296 aaKnown RBP12.69□□□□□ -0.38
CLK3-218ENST00000566926 PCSK5Q92824 1860 aa12.68□□□□□ -0.38
CLK3-218ENST00000566926 ANKDD1BA6NHY2 528 aa12.68□□□□□ -0.38
CLK3-218ENST00000566926 LRRC14BA6NHZ5 514 aa12.68□□□□□ -0.38
CLK3-218ENST00000566926 SGK494L7N484 410 aa12.68□□□□□ -0.38
CLK3-218ENST00000566926 OR7A17O14581 309 aa12.68□□□□□ -0.38
CLK3-218ENST00000566926 DIAPH2O60879 1101 aa12.68□□□□□ -0.38
CLK3-218ENST00000566926 KLHL18O94889 574 aa12.68□□□□□ -0.38
CLK3-218ENST00000566926 BMP10O95393 424 aa12.68□□□□□ -0.38
CLK3-218ENST00000566926 HPP00738 406 aa12.68□□□□□ -0.38
CLK3-218ENST00000566926 KRT6AP02538 564 aa12.68□□□□□ -0.38
CLK3-218ENST00000566926 KRT6BP04259 564 aa12.68□□□□□ -0.38
CLK3-218ENST00000566926 PLA2G2AP14555 144 aa12.68□□□□□ -0.38
CLK3-218ENST00000566926 PCSK2P16519 638 aa12.68□□□□□ -0.38
CLK3-218ENST00000566926 ITGA3P26006 1051 aa12.68□□□□□ -0.38
CLK3-218ENST00000566926 VARSP26640 1264 aaKnown RBP12.68□□□□□ -0.38
CLK3-218ENST00000566926 CASRP41180 1078 aa12.68□□□□□ -0.38
CLK3-218ENST00000566926 KRT6CP48668 564 aa12.68□□□□□ -0.38
CLK3-218ENST00000566926 IDH3AP50213 366 aa12.68□□□□□ -0.38
CLK3-218ENST00000566926 FOXL2P58012 376 aa12.68□□□□□ -0.38
CLK3-218ENST00000566926 AP2B1P63010 937 aa12.68□□□□□ -0.38
CLK3-218ENST00000566926 TRAF3Q13114 568 aa12.68□□□□□ -0.38
CLK3-218ENST00000566926 SLBPQ14493 270 aaKnown RBP eCLIP12.68□□□□□ -0.38
CLK3-218ENST00000566926 XKR6Q5GH73 641 aa12.68□□□□□ -0.38
CLK3-218ENST00000566926 LIPJQ5W064 366 aa12.68□□□□□ -0.38
CLK3-218ENST00000566926 TRPM8Q7Z2W7 1104 aa12.68□□□□□ -0.38
CLK3-218ENST00000566926 YTHDF3Q7Z739 585 aaKnown RBP12.68□□□□□ -0.38
CLK3-218ENST00000566926 ZC3H7AQ8IWR0 971 aaKnown RBP12.68□□□□□ -0.38
CLK3-218ENST00000566926 ANKRD53Q8N9V6 530 aa12.68□□□□□ -0.38
CLK3-218ENST00000566926 L3MBTL4Q8NA19 623 aa12.68□□□□□ -0.38
CLK3-218ENST00000566926 OR11G2Q8NGC1 345 aa12.68□□□□□ -0.38
CLK3-218ENST00000566926 OR52B6Q8NGF0 335 aa12.68□□□□□ -0.38
CLK3-218ENST00000566926 AGR3Q8TD06 166 aa12.68□□□□□ -0.38
CLK3-218ENST00000566926 ACTRT2Q8TDY3 377 aa12.68□□□□□ -0.38
CLK3-218ENST00000566926 TM9SF4Q92544 642 aa12.68□□□□□ -0.38
CLK3-218ENST00000566926 UBE2E3Q969T4 207 aa12.68□□□□□ -0.38
CLK3-218ENST00000566926 C19orf60Q96EN9 201 aa12.68□□□□□ -0.38
CLK3-218ENST00000566926 MAELQ96JY0 434 aaKnown RBP12.68□□□□□ -0.38
CLK3-218ENST00000566926 RILPQ96NA2 401 aa12.68□□□□□ -0.38
CLK3-218ENST00000566926 OR1F2PQ96R84 312 aa12.68□□□□□ -0.38
CLK3-218ENST00000566926 SMAD5Q99717 465 aaKnown RBP12.68□□□□□ -0.38
CLK3-218ENST00000566926 SLC6A16Q9GZN6 736 aa12.68□□□□□ -0.38
CLK3-218ENST00000566926 SPNS1Q9H2V7 528 aa12.68□□□□□ -0.38
CLK3-218ENST00000566926 TCF7L2Q9NQB0 619 aa12.68□□□□□ -0.38
CLK3-218ENST00000566926 RIC8BQ9NVN3 520 aa12.68□□□□□ -0.38
CLK3-218ENST00000566926 C19orf25Q9UFG5 118 aaPredicted RBP12.68□□□□□ -0.38
CLK3-218ENST00000566926 MKL2Q9ULH7 1088 aa12.68□□□□□ -0.38
CLK3-218ENST00000566926 NAALAD2Q9Y3Q0 740 aa12.68□□□□□ -0.38
CLK3-218ENST00000566926 ASB1Q9Y576 335 aa12.68□□□□□ -0.38
CLK3-218ENST00000566926 DNAJC15Q9Y5T4 150 aa12.68□□□□□ -0.38
CLK3-218ENST00000566926 A0A088AWK7 358 aa12.67□□□□□ -0.38
CLK3-218ENST00000566926 NSG1A0A0A6YYJ2 146 aa12.67□□□□□ -0.38
CLK3-218ENST00000566926 J3QKU1 62 aa12.67□□□□□ -0.38
CLK3-218ENST00000566926 SLC22A2O15244 555 aa12.67□□□□□ -0.38
CLK3-218ENST00000566926 GALR3O60755 368 aaPredicted RBP12.67□□□□□ -0.38
CLK3-218ENST00000566926 CLEC3AO75596 197 aa12.67□□□□□ -0.38
CLK3-218ENST00000566926 ZNF10P21506 573 aaPredicted RBP12.67□□□□□ -0.38
CLK3-218ENST00000566926 HMOX2P30519 316 aa12.67□□□□□ -0.38
CLK3-218ENST00000566926 HNF4AP41235 474 aa12.67□□□□□ -0.38
CLK3-218ENST00000566926 CASP2P42575 452 aa12.67□□□□□ -0.38
CLK3-218ENST00000566926 XCR1P46094 333 aa12.67□□□□□ -0.38
CLK3-218ENST00000566926 MAT1AQ00266 395 aaKnown RBP12.67□□□□□ -0.38
CLK3-218ENST00000566926 IRF8Q02556 426 aa12.67□□□□□ -0.38
CLK3-218ENST00000566926 PDCD2Q16342 344 aaPredicted RBP12.67□□□□□ -0.38
CLK3-218ENST00000566926 SYT16Q17RD7 645 aa12.67□□□□□ -0.38
CLK3-218ENST00000566926 UGT3A2Q3SY77 523 aa12.67□□□□□ -0.38
CLK3-218ENST00000566926 MFSD4BQ5TF39 518 aa12.67□□□□□ -0.38
CLK3-218ENST00000566926 NDUFAF7Q7L592 441 aa12.67□□□□□ -0.38
CLK3-218ENST00000566926 PRSS41Q7RTY9 318 aa12.67□□□□□ -0.38
CLK3-218ENST00000566926 LAPTM4BQ86VI4 370 aa12.67□□□□□ -0.38
CLK3-218ENST00000566926 OR4F6Q8NGB9 312 aa12.67□□□□□ -0.38
CLK3-218ENST00000566926 CEP70Q8NHQ1 597 aa12.67□□□□□ -0.38
CLK3-218ENST00000566926 METTL6Q8TCB7 284 aa12.67□□□□□ -0.38
CLK3-218ENST00000566926 TWIST2Q8WVJ9 160 aa12.67□□□□□ -0.38
CLK3-218ENST00000566926 ESAMQ96AP7 390 aa12.67□□□□□ -0.38
CLK3-218ENST00000566926 REPS1Q96D71 796 aa12.67□□□□□ -0.38
CLK3-218ENST00000566926 MOCOSQ96EN8 888 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms