RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 TTC30BQ8N4P2 665 aa1.4□□□□□ -2.19
SMG1-212ENST00000566328 TSPAN14Q8NG11 270 aa1.4□□□□□ -2.19
SMG1-212ENST00000566328 ZNF622Q969S3 477 aaKnown RBP eCLIP1.4□□□□□ -2.19
SMG1-212ENST00000566328 ELSPBP1Q96BH3 223 aa1.4□□□□□ -2.19
SMG1-212ENST00000566328 NSUN4Q96CB9 384 aaKnown RBP1.4□□□□□ -2.19
SMG1-212ENST00000566328 TNFRSF13CQ96RJ3 184 aa1.4□□□□□ -2.19
SMG1-212ENST00000566328 MCCC1Q96RQ3 725 aaPredicted RBP1.4□□□□□ -2.19
SMG1-212ENST00000566328 TESK2Q96S53 571 aa1.4□□□□□ -2.19
SMG1-212ENST00000566328 HSD17B14Q9BPX1 270 aa1.4□□□□□ -2.19
SMG1-212ENST00000566328 TEX12Q9BXU0 123 aa1.4□□□□□ -2.19
SMG1-212ENST00000566328 SLC2A11Q9BYW1 496 aa1.4□□□□□ -2.19
SMG1-212ENST00000566328 C3orf14Q9HBI5 128 aa1.4□□□□□ -2.19
SMG1-212ENST00000566328 EXOC1Q9NV70 894 aa1.4□□□□□ -2.19
SMG1-212ENST00000566328 KLK12Q9UKR0 248 aa1.4□□□□□ -2.19
SMG1-212ENST00000566328 ITGA11Q9UKX5 1188 aa1.4□□□□□ -2.19
SMG1-212ENST00000566328 PTRH2Q9Y3E5 179 aaKnown RBP1.4□□□□□ -2.19
SMG1-212ENST00000566328 MKI67P46013 3256 aaKnown RBP1.4□□□□□ -2.19
SMG1-212ENST00000566328 NALCNQ8IZF0 1738 aa1.4□□□□□ -2.19
SMG1-212ENST00000566328 TRPM2O94759 1503 aa1.4□□□□□ -2.19
SMG1-212ENST00000566328 TECPR2O15040 1411 aa1.4□□□□□ -2.19
SMG1-212ENST00000566328 PIK3C2GO75747 1445 aa1.4□□□□□ -2.19
SMG1-212ENST00000566328 ATRNO75882 1429 aa1.4□□□□□ -2.19
SMG1-212ENST00000566328 PPLO60437 1756 aa1.39□□□□□ -2.19
SMG1-212ENST00000566328 RGPD5Q99666 1765 aa1.39□□□□□ -2.19
SMG1-212ENST00000566328 KDM5AP29375 1690 aaKnown RBP1.39□□□□□ -2.19
SMG1-212ENST00000566328 CAMTA1Q9Y6Y1 1673 aa1.39□□□□□ -2.19
SMG1-212ENST00000566328 DIP2AQ14689 1571 aa1.39□□□□□ -2.19
SMG1-212ENST00000566328 ROCK2O75116 1388 aaKnown RBP1.39□□□□□ -2.19
SMG1-212ENST00000566328 TEX48A0A1B0GUV7 120 aa1.39□□□□□ -2.19
SMG1-212ENST00000566328 A0A1W2PPK0 400 aa1.39□□□□□ -2.19
SMG1-212ENST00000566328 EPOPA6NHQ4 379 aa1.39□□□□□ -2.19
SMG1-212ENST00000566328 FOXI3A8MTJ6 420 aaPredicted RBP1.39□□□□□ -2.19
SMG1-212ENST00000566328 ZNF487B1APH4 448 aa1.39□□□□□ -2.19
SMG1-212ENST00000566328 E2F3O00716 465 aa1.39□□□□□ -2.19
SMG1-212ENST00000566328 PDXKO00764 312 aa1.39□□□□□ -2.19
SMG1-212ENST00000566328 AP3D1O14617 1153 aa1.39□□□□□ -2.19
SMG1-212ENST00000566328 NPHP1O15259 732 aa1.39□□□□□ -2.19
SMG1-212ENST00000566328 OR6B1O95007 311 aa1.39□□□□□ -2.19
SMG1-212ENST00000566328 P0C879 139 aa1.39□□□□□ -2.19
SMG1-212ENST00000566328 HSPA5P11021 654 aaKnown RBP1.39□□□□□ -2.19
SMG1-212ENST00000566328 F3P13726 295 aa1.39□□□□□ -2.19
SMG1-212ENST00000566328 RPS2P15880 293 aaKnown RBP1.39□□□□□ -2.19
SMG1-212ENST00000566328 SAT1P21673 171 aa1.39□□□□□ -2.19
SMG1-212ENST00000566328 GDF1P27539 372 aa1.39□□□□□ -2.19
SMG1-212ENST00000566328 MAPK4P31152 587 aa1.39□□□□□ -2.19
SMG1-212ENST00000566328 NRIP1P48552 1158 aa1.39□□□□□ -2.19
SMG1-212ENST00000566328 STX17P56962 302 aa1.39□□□□□ -2.19
SMG1-212ENST00000566328 CACNG1Q06432 222 aa1.39□□□□□ -2.19
SMG1-212ENST00000566328 FASTKQ14296 549 aaKnown RBP1.39□□□□□ -2.19
SMG1-212ENST00000566328 TFDP3Q5H9I0 405 aa1.39□□□□□ -2.19
SMG1-212ENST00000566328 DND1Q8IYX4 353 aaKnown RBP1.39□□□□□ -2.19
SMG1-212ENST00000566328 CFAP61Q8NHU2 1237 aa1.39□□□□□ -2.19
SMG1-212ENST00000566328 SETD7Q8WTS6 366 aaKnown RBP1.39□□□□□ -2.19
SMG1-212ENST00000566328 FRAT1Q92837 279 aaPredicted RBP1.39□□□□□ -2.19
SMG1-212ENST00000566328 EVI5LQ96CN4 794 aa1.39□□□□□ -2.19
SMG1-212ENST00000566328 MRPL1Q9BYD6 325 aaKnown RBP1.39□□□□□ -2.19
SMG1-212ENST00000566328 ZBP1Q9H171 429 aa1.39□□□□□ -2.19
SMG1-212ENST00000566328 SYNCQ9H7C4 482 aa1.39□□□□□ -2.19
SMG1-212ENST00000566328 TBC1D22BQ9NU19 505 aa1.39□□□□□ -2.19
SMG1-212ENST00000566328 PRMT7Q9NVM4 692 aaPredicted RBP1.39□□□□□ -2.19
SMG1-212ENST00000566328 MIS18AQ9NYP9 233 aa1.39□□□□□ -2.19
SMG1-212ENST00000566328 SENP1Q9P0U3 644 aa1.39□□□□□ -2.19
SMG1-212ENST00000566328 ZNF346Q9UL40 294 aaKnown RBP1.39□□□□□ -2.19
SMG1-212ENST00000566328 MTF2Q9Y483 593 aaPredicted RBP1.39□□□□□ -2.19
SMG1-212ENST00000566328 USP32Q8NFA0 1604 aa1.39□□□□□ -2.19
SMG1-212ENST00000566328 PPIP5K1Q6PFW1 1433 aa1.39□□□□□ -2.19
SMG1-212ENST00000566328 NCOA3Q9Y6Q9 1424 aa1.39□□□□□ -2.19
SMG1-212ENST00000566328 MAP3K19Q56UN5 1328 aa1.39□□□□□ -2.19
SMG1-212ENST00000566328 EVC2Q86UK5 1308 aa1.39□□□□□ -2.19
SMG1-212ENST00000566328 GLI3P10071 1580 aa1.38□□□□□ -2.19
SMG1-212ENST00000566328 NWD1Q149M9 1564 aa1.38□□□□□ -2.19
SMG1-212ENST00000566328 NKTRP30414 1462 aaKnown RBP1.38□□□□□ -2.19
SMG1-212ENST00000566328 MYOM2P54296 1465 aa1.38□□□□□ -2.19
SMG1-212ENST00000566328 XRN1Q8IZH2 1706 aaKnown RBP1.38□□□□□ -2.19
SMG1-212ENST00000566328 SBNO1A3KN83 1393 aa1.38□□□□□ -2.19
SMG1-212ENST00000566328 KTN1Q86UP2 1357 aaKnown RBP1.38□□□□□ -2.19
SMG1-212ENST00000566328 AHDC1Q5TGY3 1603 aaPredicted RBP1.38□□□□□ -2.19
SMG1-212ENST00000566328 PGPEP1LA6NFU8 196 aa1.38□□□□□ -2.19
SMG1-212ENST00000566328 TRIM49D1C9J1S8 452 aa1.38□□□□□ -2.19
SMG1-212ENST00000566328 SIGLEC5O15389 551 aa1.38□□□□□ -2.19
SMG1-212ENST00000566328 ATP6AP2O75787 350 aa1.38□□□□□ -2.19
SMG1-212ENST00000566328 IGLV1-47P01700 117 aa1.38□□□□□ -2.19
SMG1-212ENST00000566328 CSN3P07498 182 aa1.38□□□□□ -2.19
SMG1-212ENST00000566328 HMGB1P09429 215 aaKnown RBP1.38□□□□□ -2.19
SMG1-212ENST00000566328 HMOX1P09601 288 aa1.38□□□□□ -2.19
SMG1-212ENST00000566328 MYL6BP14649 208 aa1.38□□□□□ -2.19
SMG1-212ENST00000566328 SLC25A1P53007 311 aa1.38□□□□□ -2.19
SMG1-212ENST00000566328 ADARP55265 1226 aaKnown RBP1.38□□□□□ -2.19
SMG1-212ENST00000566328 OVGP1Q12889 678 aa1.38□□□□□ -2.19
SMG1-212ENST00000566328 SLC39A6Q13433 755 aa1.38□□□□□ -2.19
SMG1-212ENST00000566328 SLC15A2Q16348 729 aa1.38□□□□□ -2.19
SMG1-212ENST00000566328 TEX35Q5T0J7 233 aa1.38□□□□□ -2.19
SMG1-212ENST00000566328 IRGCQ6NXR0 463 aa1.38□□□□□ -2.19
SMG1-212ENST00000566328 Q6ZVQ6 151 aa1.38□□□□□ -2.19
SMG1-212ENST00000566328 SMC5Q8IY18 1101 aa1.38□□□□□ -2.19
SMG1-212ENST00000566328 MINDY1Q8N5J2 469 aa1.38□□□□□ -2.19
SMG1-212ENST00000566328 ST6GALNAC6Q969X2 333 aa1.38□□□□□ -2.19
SMG1-212ENST00000566328 SLCO4A1Q96BD0 722 aa1.38□□□□□ -2.19
SMG1-212ENST00000566328 STARD4Q96DR4 205 aa1.38□□□□□ -2.19
SMG1-212ENST00000566328 RBM18Q96H35 190 aaKnown RBP1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms