RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 K7EQD1 137 aa3.74□□□□□ -1.81
CHD9-215ENST00000565442 P2RX6O15547 441 aa3.74□□□□□ -1.81
CHD9-215ENST00000565442 BAG2O95816 211 aa3.74□□□□□ -1.81
CHD9-215ENST00000565442 OLFM2O95897 454 aa3.74□□□□□ -1.81
CHD9-215ENST00000565442 UGT1A6P19224 532 aa3.74□□□□□ -1.81
CHD9-215ENST00000565442 TNFSF10P50591 281 aa3.74□□□□□ -1.81
CHD9-215ENST00000565442 GSCP56915 257 aaPredicted RBP3.74□□□□□ -1.81
CHD9-215ENST00000565442 ARF5P84085 180 aa3.74□□□□□ -1.81
CHD9-215ENST00000565442 GFPT1Q06210 699 aaPredicted RBP3.74□□□□□ -1.81
CHD9-215ENST00000565442 CALCOCO2Q13137 446 aa3.74□□□□□ -1.81
CHD9-215ENST00000565442 CBX3Q13185 183 aa3.74□□□□□ -1.81
CHD9-215ENST00000565442 ZNF177Q13360 481 aaPredicted RBP3.74□□□□□ -1.81
CHD9-215ENST00000565442 PDE7AQ13946 482 aa3.74□□□□□ -1.81
CHD9-215ENST00000565442 FASTKD3Q14CZ7 662 aaKnown RBP3.74□□□□□ -1.81
CHD9-215ENST00000565442 SNRNP48Q6IEG0 339 aaKnown RBP3.74□□□□□ -1.81
CHD9-215ENST00000565442 ALKBH5Q6P6C2 394 aaKnown RBP3.74□□□□□ -1.81
CHD9-215ENST00000565442 LRRTM1Q86UE6 522 aa3.74□□□□□ -1.81
CHD9-215ENST00000565442 PEX5LQ8IYB4 626 aa3.74□□□□□ -1.81
CHD9-215ENST00000565442 METTL4Q8N3J2 472 aa3.74□□□□□ -1.81
CHD9-215ENST00000565442 OR52B6Q8NGF0 335 aa3.74□□□□□ -1.81
CHD9-215ENST00000565442 PRCCQ92733 491 aaPredicted RBP3.74□□□□□ -1.81
CHD9-215ENST00000565442 GUCD1Q96NT3 240 aa3.74□□□□□ -1.81
CHD9-215ENST00000565442 ERGIC2Q96RQ1 377 aa3.74□□□□□ -1.81
CHD9-215ENST00000565442 DBNDD1Q9H9R9 158 aa3.74□□□□□ -1.81
CHD9-215ENST00000565442 GPN1Q9HCN4 374 aaPredicted RBP3.74□□□□□ -1.81
CHD9-215ENST00000565442 ZCCHC3Q9NUD5 404 aaKnown RBP3.74□□□□□ -1.81
CHD9-215ENST00000565442 MIS18AQ9NYP9 233 aa3.74□□□□□ -1.81
CHD9-215ENST00000565442 NUDT4Q9NZJ9 180 aa3.74□□□□□ -1.81
CHD9-215ENST00000565442 FOXA2Q9Y261 457 aaPredicted RBP3.74□□□□□ -1.81
CHD9-215ENST00000565442 ZHX2Q9Y6X8 837 aa3.74□□□□□ -1.81
CHD9-215ENST00000565442 LOC105371242A0A075B767 164 aa3.73□□□□□ -1.81
CHD9-215ENST00000565442 A0A0U1RQG5 324 aaPredicted RBP3.73□□□□□ -1.81
CHD9-215ENST00000565442 ATP6AP2A0A1C7CYW4 349 aa3.73□□□□□ -1.81
CHD9-215ENST00000565442 KPNA7A9QM74 516 aa3.73□□□□□ -1.81
CHD9-215ENST00000565442 NXPH4O95158 308 aa3.73□□□□□ -1.81
CHD9-215ENST00000565442 ANGPTL1O95841 491 aa3.73□□□□□ -1.81
CHD9-215ENST00000565442 EPOP01588 193 aa3.73□□□□□ -1.81
CHD9-215ENST00000565442 LYNP07948 512 aa3.73□□□□□ -1.81
CHD9-215ENST00000565442 GSTA2P09210 222 aa3.73□□□□□ -1.81
CHD9-215ENST00000565442 ANPEPP15144 967 aa3.73□□□□□ -1.81
CHD9-215ENST00000565442 EDNRAP25101 427 aa3.73□□□□□ -1.81
CHD9-215ENST00000565442 ATP6V1E1P36543 226 aa3.73□□□□□ -1.81
CHD9-215ENST00000565442 TMEM50BP56557 158 aa3.73□□□□□ -1.81
CHD9-215ENST00000565442 KCNK10P57789 538 aa3.73□□□□□ -1.81
CHD9-215ENST00000565442 GALK2Q01415 458 aa3.73□□□□□ -1.81
CHD9-215ENST00000565442 GK2Q14410 553 aaPredicted RBP3.73□□□□□ -1.81
CHD9-215ENST00000565442 ZNF497Q6ZNH5 498 aa3.73□□□□□ -1.81
CHD9-215ENST00000565442 ZNF410Q86VK4 478 aa3.73□□□□□ -1.81
CHD9-215ENST00000565442 CACUL1Q86Y37 369 aa3.73□□□□□ -1.81
CHD9-215ENST00000565442 STHQ8IWL8 128 aa3.73□□□□□ -1.81
CHD9-215ENST00000565442 FBXW8Q8N3Y1 598 aa3.73□□□□□ -1.81
CHD9-215ENST00000565442 CCDC197Q8NCU1 140 aa3.73□□□□□ -1.81
CHD9-215ENST00000565442 OR10G7Q8NGN6 311 aa3.73□□□□□ -1.81
CHD9-215ENST00000565442 GANCQ8TET4 914 aa3.73□□□□□ -1.81
CHD9-215ENST00000565442 UBTD2Q8WUN7 234 aa3.73□□□□□ -1.81
CHD9-215ENST00000565442 C18orf12Q96KH6 178 aa3.73□□□□□ -1.81
CHD9-215ENST00000565442 CXorf58Q96LI9 332 aa3.73□□□□□ -1.81
CHD9-215ENST00000565442 SPATA13Q96N96 652 aa3.73□□□□□ -1.81
CHD9-215ENST00000565442 AGAP4Q96P64 663 aa3.73□□□□□ -1.81
CHD9-215ENST00000565442 GAL3ST4Q96RP7 486 aa3.73□□□□□ -1.81
CHD9-215ENST00000565442 IWS1Q96ST2 819 aa3.73□□□□□ -1.81
CHD9-215ENST00000565442 MCRIP2Q9BUT9 160 aaKnown RBP3.73□□□□□ -1.81
CHD9-215ENST00000565442 EGLN1Q9GZT9 426 aa3.73□□□□□ -1.81
CHD9-215ENST00000565442 TSPYL1Q9H0U9 437 aa3.73□□□□□ -1.81
CHD9-215ENST00000565442 KCNK13Q9HB14 408 aa3.73□□□□□ -1.81
CHD9-215ENST00000565442 S100A14Q9HCY8 104 aa3.73□□□□□ -1.81
CHD9-215ENST00000565442 UBE2TQ9NPD8 197 aaPredicted RBP3.73□□□□□ -1.81
CHD9-215ENST00000565442 IL1RAPQ9NPH3 570 aa3.73□□□□□ -1.81
CHD9-215ENST00000565442 MED17Q9NVC6 651 aa3.73□□□□□ -1.81
CHD9-215ENST00000565442 COMMD8Q9NX08 183 aa3.73□□□□□ -1.81
CHD9-215ENST00000565442 NDE1Q9NXR1 346 aa3.73□□□□□ -1.81
CHD9-215ENST00000565442 CYP39A1Q9NYL5 469 aa3.73□□□□□ -1.81
CHD9-215ENST00000565442 ERVK-19Q9WJR5 959 aa3.73□□□□□ -1.81
CHD9-215ENST00000565442 MRPS18CQ9Y3D5 142 aaKnown RBP3.73□□□□□ -1.81
CHD9-215ENST00000565442 IGHV3-20A0A0C4DH32 117 aa3.72□□□□□ -1.81
CHD9-215ENST00000565442 IQCMA0A1B0GVH7 501 aa3.72□□□□□ -1.81
CHD9-215ENST00000565442 NDUFAF8A1L188 74 aa3.72□□□□□ -1.81
CHD9-215ENST00000565442 RNF103O00237 685 aa3.72□□□□□ -1.81
CHD9-215ENST00000565442 TFECO14948 347 aaPredicted RBP3.72□□□□□ -1.81
CHD9-215ENST00000565442 IDH3BO43837 385 aa3.72□□□□□ -1.81
CHD9-215ENST00000565442 MTRF1O75570 445 aaKnown RBP3.72□□□□□ -1.81
CHD9-215ENST00000565442 CPNE6O95741 557 aa3.72□□□□□ -1.81
CHD9-215ENST00000565442 FGF19O95750 216 aa3.72□□□□□ -1.81
CHD9-215ENST00000565442 MT-ND3P03897 115 aa3.72□□□□□ -1.81
CHD9-215ENST00000565442 DPEP1P16444 411 aa3.72□□□□□ -1.81
CHD9-215ENST00000565442 FERP16591 822 aa3.72□□□□□ -1.81
CHD9-215ENST00000565442 UGT1A4P22310 534 aa3.72□□□□□ -1.81
CHD9-215ENST00000565442 NDST2P52849 883 aa3.72□□□□□ -1.81
CHD9-215ENST00000565442 YBEYP58557 167 aaPredicted RBP3.72□□□□□ -1.81
CHD9-215ENST00000565442 ERVK11-1P61568 191 aa3.72□□□□□ -1.81
CHD9-215ENST00000565442 GABPAQ06546 454 aa3.72□□□□□ -1.81
CHD9-215ENST00000565442 GCKRQ14397 625 aa3.72□□□□□ -1.81
CHD9-215ENST00000565442 KRT31Q15323 416 aa3.72□□□□□ -1.81
CHD9-215ENST00000565442 STX1AQ16623 288 aa3.72□□□□□ -1.81
CHD9-215ENST00000565442 CAPN13Q6MZZ7 669 aaPredicted RBP3.72□□□□□ -1.81
CHD9-215ENST00000565442 CD164L2Q6UWJ8 174 aa3.72□□□□□ -1.81
CHD9-215ENST00000565442 C3P1Q6ZMU1 363 aa3.72□□□□□ -1.81
CHD9-215ENST00000565442 GDPGP1Q6ZNW5 385 aa3.72□□□□□ -1.81
CHD9-215ENST00000565442 CYP4V2Q6ZWL3 525 aaPredicted RBP3.72□□□□□ -1.81
CHD9-215ENST00000565442 ARL10Q8N8L6 244 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms