RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 CLDN8P56748 225 aa10.51□□□□□ -0.73
SF3B3-205ENST00000564899 KCNK10P57789 538 aa10.51□□□□□ -0.73
SF3B3-205ENST00000564899 ACY1Q03154 408 aa10.51□□□□□ -0.73
SF3B3-205ENST00000564899 BNIP1Q12981 228 aa10.51□□□□□ -0.73
SF3B3-205ENST00000564899 TRA2AQ13595 282 aaKnown RBP eCLIP10.51□□□□□ -0.73
SF3B3-205ENST00000564899 CYLC2Q14093 348 aaPredicted RBP10.51□□□□□ -0.73
SF3B3-205ENST00000564899 GRM7Q14831 915 aa10.51□□□□□ -0.73
SF3B3-205ENST00000564899 SLC9A5Q14940 896 aa10.51□□□□□ -0.73
SF3B3-205ENST00000564899 NDUFA9Q16795 377 aa10.51□□□□□ -0.73
SF3B3-205ENST00000564899 RBM44Q6ZP01 1051 aaKnown RBP10.51□□□□□ -0.73
SF3B3-205ENST00000564899 RIPOR1Q6ZS17 1223 aa10.51□□□□□ -0.73
SF3B3-205ENST00000564899 LURAP1LQ8IV03 231 aa10.51□□□□□ -0.73
SF3B3-205ENST00000564899 FUNDC1Q8IVP5 155 aa10.51□□□□□ -0.73
SF3B3-205ENST00000564899 ZCCHC7Q8N3Z6 543 aaKnown RBP10.51□□□□□ -0.73
SF3B3-205ENST00000564899 KRTCAP2Q8N6L1 136 aa10.51□□□□□ -0.73
SF3B3-205ENST00000564899 POU5F2Q8N7G0 328 aa10.51□□□□□ -0.73
SF3B3-205ENST00000564899 ACOT4Q8N9L9 421 aa10.51□□□□□ -0.73
SF3B3-205ENST00000564899 TTC29Q8NA56 475 aaPredicted RBP10.51□□□□□ -0.73
SF3B3-205ENST00000564899 GLB1L3Q8NCI6 653 aaPredicted RBP10.51□□□□□ -0.73
SF3B3-205ENST00000564899 LSM14AQ8ND56 463 aaKnown RBP10.51□□□□□ -0.73
SF3B3-205ENST00000564899 RP9Q8TA86 221 aaKnown RBP10.51□□□□□ -0.73
SF3B3-205ENST00000564899 PROKR1Q8TCW9 393 aa10.51□□□□□ -0.73
SF3B3-205ENST00000564899 C16orf78Q8WTQ4 265 aa10.51□□□□□ -0.73
SF3B3-205ENST00000564899 FGF11Q92914 225 aa10.51□□□□□ -0.73
SF3B3-205ENST00000564899 NSL1Q96IY1 281 aa10.51□□□□□ -0.73
SF3B3-205ENST00000564899 EGLN2Q96KS0 407 aa10.51□□□□□ -0.73
SF3B3-205ENST00000564899 TEX37Q96LM6 180 aa10.51□□□□□ -0.73
SF3B3-205ENST00000564899 SPRTNQ9H040 489 aaPredicted RBP10.51□□□□□ -0.73
SF3B3-205ENST00000564899 MYNNQ9NPC7 610 aa10.51□□□□□ -0.73
SF3B3-205ENST00000564899 PRDM7Q9NQW5 492 aa10.51□□□□□ -0.73
SF3B3-205ENST00000564899 TXLNGQ9NUQ3 528 aa10.51□□□□□ -0.73
SF3B3-205ENST00000564899 RP1P56715 2156 aa10.5□□□□□ -0.73
SF3B3-205ENST00000564899 TLN1Q9Y490 2541 aaKnown RBP10.5□□□□□ -0.73
SF3B3-205ENST00000564899 LOC100653049A0A140TA62 436 aa10.5□□□□□ -0.73
SF3B3-205ENST00000564899 AGRPO00253 132 aa10.5□□□□□ -0.73
SF3B3-205ENST00000564899 SCAMP2O15127 329 aaKnown RBP10.5□□□□□ -0.73
SF3B3-205ENST00000564899 RRP8O43159 456 aaKnown RBP10.5□□□□□ -0.73
SF3B3-205ENST00000564899 AKAP10O43572 662 aa10.5□□□□□ -0.73
SF3B3-205ENST00000564899 B3GALT2O43825 422 aa10.5□□□□□ -0.73
SF3B3-205ENST00000564899 OR2B3O76000 313 aa10.5□□□□□ -0.73
SF3B3-205ENST00000564899 KRT34O76011 436 aa10.5□□□□□ -0.73
SF3B3-205ENST00000564899 KLHL18O94889 574 aa10.5□□□□□ -0.73
SF3B3-205ENST00000564899 SCELO95171 688 aa10.5□□□□□ -0.73
SF3B3-205ENST00000564899 SNRPB2P08579 225 aaKnown RBP10.5□□□□□ -0.73
SF3B3-205ENST00000564899 IL3P08700 152 aa10.5□□□□□ -0.73
SF3B3-205ENST00000564899 SMIM10L1P0DMW3 83 aa10.5□□□□□ -0.73
SF3B3-205ENST00000564899 ESRRAP11474 423 aaPredicted RBP10.5□□□□□ -0.73
SF3B3-205ENST00000564899 IL1RNP18510 177 aa10.5□□□□□ -0.73
SF3B3-205ENST00000564899 CALB2P22676 271 aa10.5□□□□□ -0.73
SF3B3-205ENST00000564899 CSTF2P33240 577 aaKnown RBP eCLIP10.5□□□□□ -0.73
SF3B3-205ENST00000564899 HPCAL1P37235 193 aa10.5□□□□□ -0.73
SF3B3-205ENST00000564899 GSTM5P46439 218 aa10.5□□□□□ -0.73
SF3B3-205ENST00000564899 CPA2P48052 419 aa10.5□□□□□ -0.73
SF3B3-205ENST00000564899 POLR2JP52435 117 aaKnown RBP10.5□□□□□ -0.73
SF3B3-205ENST00000564899 ITGA1P56199 1179 aa10.5□□□□□ -0.73
SF3B3-205ENST00000564899 TAS2R50P59544 299 aa10.5□□□□□ -0.73
SF3B3-205ENST00000564899 TRA2BP62995 288 aaKnown RBP10.5□□□□□ -0.73
SF3B3-205ENST00000564899 SNRPNP63162 240 aaKnown RBP10.5□□□□□ -0.73
SF3B3-205ENST00000564899 E2F1Q01094 437 aa10.5□□□□□ -0.73
SF3B3-205ENST00000564899 INSM1Q01101 510 aaPredicted RBP10.5□□□□□ -0.73
SF3B3-205ENST00000564899 ZFP36L1Q07352 338 aaKnown RBP10.5□□□□□ -0.73
SF3B3-205ENST00000564899 SLAMF1Q13291 335 aa10.5□□□□□ -0.73
SF3B3-205ENST00000564899 RCAN2Q14206 197 aa10.5□□□□□ -0.73
SF3B3-205ENST00000564899 TBC1D25Q3MII6 688 aa10.5□□□□□ -0.73
SF3B3-205ENST00000564899 DEFB134Q4QY38 66 aa10.5□□□□□ -0.73
SF3B3-205ENST00000564899 ARHGAP40Q5TG30 622 aa10.5□□□□□ -0.73
SF3B3-205ENST00000564899 GARNL3Q5VVW2 1013 aa10.5□□□□□ -0.73
SF3B3-205ENST00000564899 IKBIPQ70UQ0 350 aa10.5□□□□□ -0.73
SF3B3-205ENST00000564899 B3GNT8Q7Z7M8 397 aa10.5□□□□□ -0.73
SF3B3-205ENST00000564899 GPR135Q8IZ08 494 aa10.5□□□□□ -0.73
SF3B3-205ENST00000564899 TMEM132CQ8N3T6 1108 aa10.5□□□□□ -0.73
SF3B3-205ENST00000564899 ARHGEF39Q8N4T4 335 aa10.5□□□□□ -0.73
SF3B3-205ENST00000564899 AMER3Q8N944 861 aa10.5□□□□□ -0.73
SF3B3-205ENST00000564899 OR1L3Q8NH93 324 aa10.5□□□□□ -0.73
SF3B3-205ENST00000564899 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.5□□□□□ -0.73
SF3B3-205ENST00000564899 STARD8Q92502 1023 aa10.5□□□□□ -0.73
SF3B3-205ENST00000564899 GFM2Q969S9 779 aaKnown RBP10.5□□□□□ -0.73
SF3B3-205ENST00000564899 SPDL1Q96EA4 605 aa10.5□□□□□ -0.73
SF3B3-205ENST00000564899 SMIM10Q96HG1 83 aa10.5□□□□□ -0.73
SF3B3-205ENST00000564899 C10orf90Q96M02 699 aa10.5□□□□□ -0.73
SF3B3-205ENST00000564899 TMEM74Q96NL1 305 aa10.5□□□□□ -0.73
SF3B3-205ENST00000564899 SERINC2Q96SA4 455 aa10.5□□□□□ -0.73
SF3B3-205ENST00000564899 SLC25A23Q9BV35 468 aa10.5□□□□□ -0.73
SF3B3-205ENST00000564899 NRSN2Q9GZP1 204 aa10.5□□□□□ -0.73
SF3B3-205ENST00000564899 CLMPQ9H6B4 373 aa10.5□□□□□ -0.73
SF3B3-205ENST00000564899 ANKHQ9HCJ1 492 aa10.5□□□□□ -0.73
SF3B3-205ENST00000564899 FGF21Q9NSA1 209 aa10.5□□□□□ -0.73
SF3B3-205ENST00000564899 LYARQ9NX58 379 aaKnown RBP10.5□□□□□ -0.73
SF3B3-205ENST00000564899 MAPRE3Q9UPY8 281 aa10.5□□□□□ -0.73
SF3B3-205ENST00000564899 WBP11Q9Y2W2 641 aaKnown RBP10.5□□□□□ -0.73
SF3B3-205ENST00000564899 PCDHGA1Q9Y5H4 931 aa10.5□□□□□ -0.73
SF3B3-205ENST00000564899 SLC22A7Q9Y694 548 aa10.5□□□□□ -0.73
SF3B3-205ENST00000564899 SPENQ96T58 3664 aaKnown RBP10.5□□□□□ -0.73
SF3B3-205ENST00000564899 DOPEY2Q9Y3R5 2298 aa10.5□□□□□ -0.73
SF3B3-205ENST00000564899 UTP20O75691 2785 aaKnown RBP10.49□□□□□ -0.73
SF3B3-205ENST00000564899 HYKKA2RU49 373 aa10.49□□□□□ -0.73
SF3B3-205ENST00000564899 FITM1A5D6W6 292 aa10.49□□□□□ -0.73
SF3B3-205ENST00000564899 ZNF860A6NHJ4 632 aa10.49□□□□□ -0.73
SF3B3-205ENST00000564899 CCDC154A6NI56 674 aa10.49□□□□□ -0.73
SF3B3-205ENST00000564899 ERVH48-1M5A8F1 160 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms