RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 RNF32Q9H0A6 362 aa17.2■□□□□ 0.34
SYNGR3-204ENST00000564642 OR51B5Q9H339 312 aa17.2■□□□□ 0.34
SYNGR3-204ENST00000564642 LYRM4Q9HD34 91 aa17.2■□□□□ 0.34
SYNGR3-204ENST00000564642 PSMC3IPQ9P2W1 217 aaPredicted RBP17.2■□□□□ 0.34
SYNGR3-204ENST00000564642 TSC22D4Q9Y3Q8 395 aa17.2■□□□□ 0.34
SYNGR3-204ENST00000564642 SPACA6W5XKT8 324 aa17.2■□□□□ 0.34
SYNGR3-204ENST00000564642 SAGE2PA6NJ88 616 aa17.19■□□□□ 0.34
SYNGR3-204ENST00000564642 RTCAO00442 366 aaKnown RBP17.19■□□□□ 0.34
SYNGR3-204ENST00000564642 CLDN9O95484 217 aa17.19■□□□□ 0.34
SYNGR3-204ENST00000564642 PTX3P26022 381 aaPredicted RBP17.19■□□□□ 0.34
SYNGR3-204ENST00000564642 SSR2P43308 183 aa17.19■□□□□ 0.34
SYNGR3-204ENST00000564642 UQCRFS1P47985 274 aa17.19■□□□□ 0.34
SYNGR3-204ENST00000564642 TNFSF10P50591 281 aa17.19■□□□□ 0.34
SYNGR3-204ENST00000564642 CCNG1P51959 295 aa17.19■□□□□ 0.34
SYNGR3-204ENST00000564642 OR4C11Q6IEV9 310 aa17.19■□□□□ 0.34
SYNGR3-204ENST00000564642 LCA5Q86VQ0 697 aa17.19■□□□□ 0.34
SYNGR3-204ENST00000564642 SCUBE1Q8IWY4 988 aa17.19■□□□□ 0.34
SYNGR3-204ENST00000564642 RNF175Q8N4F7 328 aa17.19■□□□□ 0.34
SYNGR3-204ENST00000564642 ACOT4Q8N9L9 421 aa17.19■□□□□ 0.34
SYNGR3-204ENST00000564642 L3MBTL4Q8NA19 623 aa17.19■□□□□ 0.34
SYNGR3-204ENST00000564642 RGMAQ96B86 450 aa17.19■□□□□ 0.34
SYNGR3-204ENST00000564642 DMRT3Q9NQL9 472 aa17.19■□□□□ 0.34
SYNGR3-204ENST00000564642 PNO1Q9NRX1 252 aaKnown RBP17.19■□□□□ 0.34
SYNGR3-204ENST00000564642 TBK1Q9UHD2 729 aa17.19■□□□□ 0.34
SYNGR3-204ENST00000564642 PCTPQ9UKL6 214 aa17.19■□□□□ 0.34
SYNGR3-204ENST00000564642 RNF11Q9Y3C5 154 aa17.19■□□□□ 0.34
SYNGR3-204ENST00000564642 UBR5O95071 2799 aaPredicted RBP17.18■□□□□ 0.34
SYNGR3-204ENST00000564642 SYNDIG1LA6NDD5 238 aa17.18■□□□□ 0.34
SYNGR3-204ENST00000564642 OR5H15A6NDH6 313 aa17.18■□□□□ 0.34
SYNGR3-204ENST00000564642 CYR61O00622 381 aa17.18■□□□□ 0.34
SYNGR3-204ENST00000564642 OR7A17O14581 309 aa17.18■□□□□ 0.34
SYNGR3-204ENST00000564642 TAC1P20366 129 aa17.18■□□□□ 0.34
SYNGR3-204ENST00000564642 HIST1H1TP22492 207 aaPredicted RBP17.18■□□□□ 0.34
SYNGR3-204ENST00000564642 HNRNPFP52597 415 aaKnown RBP17.18■□□□□ 0.34
SYNGR3-204ENST00000564642 RPS13P62277 151 aaKnown RBP17.18■□□□□ 0.34
SYNGR3-204ENST00000564642 NR6A1Q15406 480 aa17.18■□□□□ 0.34
SYNGR3-204ENST00000564642 ZRSR2Q15696 482 aaKnown RBP17.18■□□□□ 0.34
SYNGR3-204ENST00000564642 TTC19Q6DKK2 380 aaPredicted RBP17.18■□□□□ 0.34
SYNGR3-204ENST00000564642 RPUSD3Q6P087 351 aaKnown RBP17.18■□□□□ 0.34
SYNGR3-204ENST00000564642 ZNF793Q6ZN11 406 aa17.18■□□□□ 0.34
SYNGR3-204ENST00000564642 CLNKQ7Z7G1 428 aa17.18■□□□□ 0.34
SYNGR3-204ENST00000564642 CRLF3Q8IUI8 442 aa17.18■□□□□ 0.34
SYNGR3-204ENST00000564642 BEST3Q8N1M1 668 aa17.18■□□□□ 0.34
SYNGR3-204ENST00000564642 TMEM52Q8NDY8 209 aa17.18■□□□□ 0.34
SYNGR3-204ENST00000564642 ELP5Q8TE02 316 aa17.18■□□□□ 0.34
SYNGR3-204ENST00000564642 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.18■□□□□ 0.34
SYNGR3-204ENST00000564642 CDK15Q96Q40 435 aa17.18■□□□□ 0.34
SYNGR3-204ENST00000564642 CSF3RQ99062 836 aa17.18■□□□□ 0.34
SYNGR3-204ENST00000564642 MAPKAP1Q9BPZ7 522 aa17.18■□□□□ 0.34
SYNGR3-204ENST00000564642 NTMT1Q9BV86 223 aa17.18■□□□□ 0.34
SYNGR3-204ENST00000564642 EPB41L4BQ9H329 900 aa17.18■□□□□ 0.34
SYNGR3-204ENST00000564642 KCMF1Q9P0J7 381 aa17.18■□□□□ 0.34
SYNGR3-204ENST00000564642 CNTRLQ7Z7A1 2325 aa17.18■□□□□ 0.34
SYNGR3-204ENST00000564642 CTNSO60931 367 aa17.17■□□□□ 0.34
SYNGR3-204ENST00000564642 MYO1DO94832 1006 aa17.17■□□□□ 0.34
SYNGR3-204ENST00000564642 CPN2P22792 545 aa17.17■□□□□ 0.34
SYNGR3-204ENST00000564642 TNFRSF8P28908 595 aa17.17■□□□□ 0.34
SYNGR3-204ENST00000564642 SLAMF1Q13291 335 aa17.17■□□□□ 0.34
SYNGR3-204ENST00000564642 UBAP2LQ14157 1087 aaKnown RBP17.17■□□□□ 0.34
SYNGR3-204ENST00000564642 ELOAQ14241 798 aaKnown RBP17.17■□□□□ 0.34
SYNGR3-204ENST00000564642 FAM180AQ6UWF9 173 aa17.17■□□□□ 0.34
SYNGR3-204ENST00000564642 MILR1Q7Z6M3 343 aa17.17■□□□□ 0.34
SYNGR3-204ENST00000564642 OR52B6Q8NGF0 335 aa17.17■□□□□ 0.34
SYNGR3-204ENST00000564642 ACMSDQ8TDX5 336 aa17.17■□□□□ 0.34
SYNGR3-204ENST00000564642 GRHL3Q8TE85 626 aa17.17■□□□□ 0.34
SYNGR3-204ENST00000564642 MTFMTQ96DP5 389 aaKnown RBP17.17■□□□□ 0.34
SYNGR3-204ENST00000564642 NSUN5Q96P11 429 aaKnown RBP17.17■□□□□ 0.34
SYNGR3-204ENST00000564642 CDCP1Q9H5V8 836 aa17.17■□□□□ 0.34
SYNGR3-204ENST00000564642 SEMA4BQ9NPR2 832 aaPredicted RBP17.17■□□□□ 0.34
SYNGR3-204ENST00000564642 PSD3Q9NYI0 1048 aa17.17■□□□□ 0.34
SYNGR3-204ENST00000564642 TMEM216Q9P0N5 145 aa17.17■□□□□ 0.34
SYNGR3-204ENST00000564642 FBXW2Q9UKT8 454 aa17.17■□□□□ 0.34
SYNGR3-204ENST00000564642 NTNG1Q9Y2I2 539 aa17.17■□□□□ 0.34
SYNGR3-204ENST00000564642 TEP1Q99973 2627 aaKnown RBP17.17■□□□□ 0.34
SYNGR3-204ENST00000564642 BLACEA4D250 179 aa17.16■□□□□ 0.34
SYNGR3-204ENST00000564642 A8MT66 165 aa17.16■□□□□ 0.34
SYNGR3-204ENST00000564642 GOLGA8RI6L899 631 aa17.16■□□□□ 0.34
SYNGR3-204ENST00000564642 FOXE1O00358 373 aaPredicted RBP17.16■□□□□ 0.34
SYNGR3-204ENST00000564642 PLPP1O14494 284 aa17.16■□□□□ 0.34
SYNGR3-204ENST00000564642 SCELO95171 688 aa17.16■□□□□ 0.34
SYNGR3-204ENST00000564642 IFNA16P05015 189 aa17.16■□□□□ 0.34
SYNGR3-204ENST00000564642 NEK2P51955 445 aa17.16■□□□□ 0.34
SYNGR3-204ENST00000564642 ARFIP1P53367 373 aa17.16■□□□□ 0.34
SYNGR3-204ENST00000564642 STX4Q12846 297 aa17.16■□□□□ 0.34
SYNGR3-204ENST00000564642 MRPL49Q13405 166 aaKnown RBP17.16■□□□□ 0.34
SYNGR3-204ENST00000564642 FHL5Q5TD97 284 aa17.16■□□□□ 0.34
SYNGR3-204ENST00000564642 RPS19BP1Q86WX3 136 aaKnown RBP17.16■□□□□ 0.34
SYNGR3-204ENST00000564642 TMEM151AQ8N4L1 468 aa17.16■□□□□ 0.34
SYNGR3-204ENST00000564642 KIF2BQ8N4N8 673 aa17.16■□□□□ 0.34
SYNGR3-204ENST00000564642 FAM26EQ8N5C1 309 aa17.16■□□□□ 0.34
SYNGR3-204ENST00000564642 NFAM1Q8NET5 270 aaPredicted RBP17.16■□□□□ 0.34
SYNGR3-204ENST00000564642 WDR20Q8TBZ3 569 aa17.16■□□□□ 0.34
SYNGR3-204ENST00000564642 BARD1Q99728 777 aaKnown RBP17.16■□□□□ 0.34
SYNGR3-204ENST00000564642 UTP23Q9BRU9 249 aaKnown RBP17.16■□□□□ 0.34
SYNGR3-204ENST00000564642 SORBS1Q9BX66 1292 aaKnown RBP17.16■□□□□ 0.34
SYNGR3-204ENST00000564642 ALOXE3Q9BYJ1 711 aa17.16■□□□□ 0.34
SYNGR3-204ENST00000564642 DEFB126Q9BYW3 111 aa17.16■□□□□ 0.34
SYNGR3-204ENST00000564642 ZBTB26Q9HCK0 441 aa17.16■□□□□ 0.34
SYNGR3-204ENST00000564642 ADAP2Q9NPF8 381 aa17.16■□□□□ 0.34
SYNGR3-204ENST00000564642 MS4A12Q9NXJ0 267 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms