RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 C1GALT1Q9NS00 363 aa14.78□□□□□ -0.04
COMMD4-210ENST00000564587 SLC6A13Q9NSD5 602 aa14.78□□□□□ -0.04
COMMD4-210ENST00000564587 GIMAP4Q9NUV9 329 aa14.78□□□□□ -0.04
COMMD4-210ENST00000564587 MS4A12Q9NXJ0 267 aa14.78□□□□□ -0.04
COMMD4-210ENST00000564587 GMPR2Q9P2T1 348 aaKnown RBP14.78□□□□□ -0.04
COMMD4-210ENST00000564587 EPHA6Q9UF33 1036 aa14.78□□□□□ -0.04
COMMD4-210ENST00000564587 FBXO4Q9UKT5 387 aa14.78□□□□□ -0.04
COMMD4-210ENST00000564587 PSME2Q9UL46 239 aa14.78□□□□□ -0.04
COMMD4-210ENST00000564587 ASB4Q9Y574 426 aa14.78□□□□□ -0.04
COMMD4-210ENST00000564587 SPAG17Q6Q759 2223 aa14.78□□□□□ -0.04
COMMD4-210ENST00000564587 A0A1B0GVT2 93 aa14.77□□□□□ -0.05
COMMD4-210ENST00000564587 TCRBV5S2A0A599 114 aa14.77□□□□□ -0.05
COMMD4-210ENST00000564587 RHPN2P1A8MT19 583 aa14.77□□□□□ -0.05
COMMD4-210ENST00000564587 YKT6O15498 198 aa14.77□□□□□ -0.05
COMMD4-210ENST00000564587 SRPX2O60687 465 aaPredicted RBP14.77□□□□□ -0.05
COMMD4-210ENST00000564587 CTSVO60911 334 aa14.77□□□□□ -0.05
COMMD4-210ENST00000564587 C6orf47O95873 294 aa14.77□□□□□ -0.05
COMMD4-210ENST00000564587 NTSP30990 170 aa14.77□□□□□ -0.05
COMMD4-210ENST00000564587 MANFP55145 182 aaKnown RBP14.77□□□□□ -0.05
COMMD4-210ENST00000564587 SKP1P63208 163 aa14.77□□□□□ -0.05
COMMD4-210ENST00000564587 HBA1P69905 142 aa14.77□□□□□ -0.05
COMMD4-210ENST00000564587 RBBP4Q09028 425 aa14.77□□□□□ -0.05
COMMD4-210ENST00000564587 VEZF1Q14119 521 aa14.77□□□□□ -0.05
COMMD4-210ENST00000564587 FAM98BQ52LJ0 330 aaKnown RBP14.77□□□□□ -0.05
COMMD4-210ENST00000564587 TBCELQ5QJ74 424 aa14.77□□□□□ -0.05
COMMD4-210ENST00000564587 C6orf132Q5T0Z8 1188 aa14.77□□□□□ -0.05
COMMD4-210ENST00000564587 OGFRL1Q5TC84 451 aaPredicted RBP14.77□□□□□ -0.05
COMMD4-210ENST00000564587 NDUFAF5Q5TEU4 345 aa14.77□□□□□ -0.05
COMMD4-210ENST00000564587 ZNF793Q6ZN11 406 aa14.77□□□□□ -0.05
COMMD4-210ENST00000564587 RNF111Q6ZNA4 994 aa14.77□□□□□ -0.05
COMMD4-210ENST00000564587 GPR155Q7Z3F1 870 aa14.77□□□□□ -0.05
COMMD4-210ENST00000564587 C1orf210Q8IVY1 113 aa14.77□□□□□ -0.05
COMMD4-210ENST00000564587 ADGRG5Q8IZF4 528 aa14.77□□□□□ -0.05
COMMD4-210ENST00000564587 OR52N2Q8NGI0 321 aa14.77□□□□□ -0.05
COMMD4-210ENST00000564587 UTP15Q8TED0 518 aaKnown RBP14.77□□□□□ -0.05
COMMD4-210ENST00000564587 DNAJC9Q8WXX5 260 aa14.77□□□□□ -0.05
COMMD4-210ENST00000564587 FAM162AQ96A26 154 aa14.77□□□□□ -0.05
COMMD4-210ENST00000564587 AURKBQ96GD4 344 aaPredicted RBP14.77□□□□□ -0.05
COMMD4-210ENST00000564587 PIF1Q9H611 641 aa14.77□□□□□ -0.05
COMMD4-210ENST00000564587 RPF2Q9H7B2 306 aaKnown RBP14.77□□□□□ -0.05
COMMD4-210ENST00000564587 C11orf16Q9NQ32 467 aa14.77□□□□□ -0.05
COMMD4-210ENST00000564587 C8orf4Q9NR00 106 aa14.77□□□□□ -0.05
COMMD4-210ENST00000564587 OLAHQ9NV23 265 aa14.77□□□□□ -0.05
COMMD4-210ENST00000564587 RIMS3Q9UJD0 308 aa14.77□□□□□ -0.05
COMMD4-210ENST00000564587 GON4LQ3T8J9 2241 aa14.77□□□□□ -0.05
COMMD4-210ENST00000564587 H0YGG7 62 aa14.76□□□□□ -0.05
COMMD4-210ENST00000564587 NUDT21O43809 227 aaKnown RBP14.76□□□□□ -0.05
COMMD4-210ENST00000564587 B3GALT2O43825 422 aa14.76□□□□□ -0.05
COMMD4-210ENST00000564587 CREG1O75629 220 aa14.76□□□□□ -0.05
COMMD4-210ENST00000564587 CAPNS1P04632 268 aa14.76□□□□□ -0.05
COMMD4-210ENST00000564587 HOXB3P14651 431 aaPredicted RBP14.76□□□□□ -0.05
COMMD4-210ENST00000564587 NCK1P16333 377 aa14.76□□□□□ -0.05
COMMD4-210ENST00000564587 TYRP1P17643 537 aa14.76□□□□□ -0.05
COMMD4-210ENST00000564587 FASP25445 335 aa14.76□□□□□ -0.05
COMMD4-210ENST00000564587 TLX1P31314 330 aaPredicted RBP14.76□□□□□ -0.05
COMMD4-210ENST00000564587 HOXD12P35452 270 aa14.76□□□□□ -0.05
COMMD4-210ENST00000564587 BUD31P41223 144 aaPredicted RBP14.76□□□□□ -0.05
COMMD4-210ENST00000564587 GPR3P46089 330 aa14.76□□□□□ -0.05
COMMD4-210ENST00000564587 PCBP4P57723 403 aaKnown RBP14.76□□□□□ -0.05
COMMD4-210ENST00000564587 ARF3P61204 181 aaPredicted RBP14.76□□□□□ -0.05
COMMD4-210ENST00000564587 BTN3A2P78410 334 aa14.76□□□□□ -0.05
COMMD4-210ENST00000564587 CSTF1Q05048 431 aaKnown RBP14.76□□□□□ -0.05
COMMD4-210ENST00000564587 CHRNB3Q05901 458 aa14.76□□□□□ -0.05
COMMD4-210ENST00000564587 RGNQ15493 299 aa14.76□□□□□ -0.05
COMMD4-210ENST00000564587 MPEG1Q2M385 716 aa14.76□□□□□ -0.05
COMMD4-210ENST00000564587 VMACQ2NL98 169 aa14.76□□□□□ -0.05
COMMD4-210ENST00000564587 DEFB133Q30KQ1 61 aa14.76□□□□□ -0.05
COMMD4-210ENST00000564587 TSSK4Q6SA08 328 aa14.76□□□□□ -0.05
COMMD4-210ENST00000564587 ERMP1Q7Z2K6 904 aa14.76□□□□□ -0.05
COMMD4-210ENST00000564587 SFTPA2Q8IWL1 248 aa14.76□□□□□ -0.05
COMMD4-210ENST00000564587 SLC30A8Q8IWU4 369 aa14.76□□□□□ -0.05
COMMD4-210ENST00000564587 ARL10Q8N8L6 244 aa14.76□□□□□ -0.05
COMMD4-210ENST00000564587 C19orf47Q8N9M1 422 aaKnown RBP14.76□□□□□ -0.05
COMMD4-210ENST00000564587 OR6C4Q8NGE1 309 aa14.76□□□□□ -0.05
COMMD4-210ENST00000564587 OR8K5Q8NH50 307 aa14.76□□□□□ -0.05
COMMD4-210ENST00000564587 FIG4Q92562 907 aa14.76□□□□□ -0.05
COMMD4-210ENST00000564587 CIDECQ96AQ7 238 aaPredicted RBP14.76□□□□□ -0.05
COMMD4-210ENST00000564587 SLCO4A1Q96BD0 722 aa14.76□□□□□ -0.05
COMMD4-210ENST00000564587 PPWD1Q96BP3 646 aaKnown RBP14.76□□□□□ -0.05
COMMD4-210ENST00000564587 ZDHHC12Q96GR4 267 aa14.76□□□□□ -0.05
COMMD4-210ENST00000564587 TCTN2Q96GX1 697 aa14.76□□□□□ -0.05
COMMD4-210ENST00000564587 TRAPPC9Q96Q05 1148 aa14.76□□□□□ -0.05
COMMD4-210ENST00000564587 ELF4Q99607 663 aaPredicted RBP14.76□□□□□ -0.05
COMMD4-210ENST00000564587 ZNF184Q99676 751 aaPredicted RBP14.76□□□□□ -0.05
COMMD4-210ENST00000564587 CCDC3Q9BQI4 270 aa14.76□□□□□ -0.05
COMMD4-210ENST00000564587 SLC35A5Q9BS91 424 aa14.76□□□□□ -0.05
COMMD4-210ENST00000564587 DUSP23Q9BVJ7 150 aa14.76□□□□□ -0.05
COMMD4-210ENST00000564587 MAGIXQ9H6Y5 334 aa14.76□□□□□ -0.05
COMMD4-210ENST00000564587 SLC35C2Q9NQQ7 365 aa14.76□□□□□ -0.05
COMMD4-210ENST00000564587 TEX10Q9NXF1 929 aaPredicted RBP14.76□□□□□ -0.05
COMMD4-210ENST00000564587 CNOT11Q9UKZ1 510 aaKnown RBP14.76□□□□□ -0.05
COMMD4-210ENST00000564587 AURKCQ9UQB9 309 aa14.76□□□□□ -0.05
COMMD4-210ENST00000564587 SLC22A7Q9Y694 548 aa14.76□□□□□ -0.05
COMMD4-210ENST00000564587 SPACA6W5XKT8 324 aa14.76□□□□□ -0.05
COMMD4-210ENST00000564587 TP53BP1Q12888 1972 aaPredicted RBP14.75□□□□□ -0.05
COMMD4-210ENST00000564587 PROM1O43490 865 aa14.75□□□□□ -0.05
COMMD4-210ENST00000564587 KCNK5O95279 499 aa14.75□□□□□ -0.05
COMMD4-210ENST00000564587 B3GALT4O96024 378 aa14.75□□□□□ -0.05
COMMD4-210ENST00000564587 PDGFBP01127 241 aaPredicted RBP14.75□□□□□ -0.05
COMMD4-210ENST00000564587 ZNF888P0CJ79 500 aaPredicted RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms