RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 SPHK1Q9NYA1 384 aa16.9■□□□□ 0.3
GDE1-203ENST00000564172 CPNE7Q9UBL6 633 aa16.9■□□□□ 0.3
GDE1-203ENST00000564172 TNFRSF10DQ9UBN6 386 aa16.9■□□□□ 0.3
GDE1-203ENST00000564172 SDK1Q7Z5N4 2213 aa16.89■□□□□ 0.3
GDE1-203ENST00000564172 KIR2DS5A0A0G2JLQ3 304 aa16.89■□□□□ 0.29
GDE1-203ENST00000564172 A0A0G2JNG1 304 aa16.89■□□□□ 0.29
GDE1-203ENST00000564172 KIR2DS3K7RE56 304 aa16.89■□□□□ 0.29
GDE1-203ENST00000564172 BET1O15155 118 aa16.89■□□□□ 0.29
GDE1-203ENST00000564172 NOL3O60936 208 aaKnown RBP16.89■□□□□ 0.29
GDE1-203ENST00000564172 VIPP01282 170 aa16.89■□□□□ 0.29
GDE1-203ENST00000564172 POLR2JP52435 117 aaKnown RBP16.89■□□□□ 0.29
GDE1-203ENST00000564172 TMBIM6P55061 237 aa16.89■□□□□ 0.29
GDE1-203ENST00000564172 KIR2DS5Q14953 304 aa16.89■□□□□ 0.29
GDE1-203ENST00000564172 PLEKHG7Q6ZR37 379 aa16.89■□□□□ 0.29
GDE1-203ENST00000564172 TRIM48Q8IWZ4 208 aa16.89■□□□□ 0.29
GDE1-203ENST00000564172 FAM46DQ8NEK8 389 aa16.89■□□□□ 0.29
GDE1-203ENST00000564172 ZFPM2Q8WW38 1151 aa16.89■□□□□ 0.29
GDE1-203ENST00000564172 C11orf24Q96F05 449 aaPredicted RBP16.89■□□□□ 0.29
GDE1-203ENST00000564172 AIF1LQ9BQI0 150 aa16.89■□□□□ 0.29
GDE1-203ENST00000564172 TESMINQ9Y4I5 508 aa16.89■□□□□ 0.29
GDE1-203ENST00000564172 IGKV1-8A0A0C4DH67 115 aa16.89■□□□□ 0.29
GDE1-203ENST00000564172 FAM234BA2RU67 622 aa16.89■□□□□ 0.29
GDE1-203ENST00000564172 SH3BGRLO75368 114 aa16.89■□□□□ 0.29
GDE1-203ENST00000564172 BCL10O95999 233 aa16.89■□□□□ 0.29
GDE1-203ENST00000564172 PIK3CBP42338 1070 aa16.89■□□□□ 0.29
GDE1-203ENST00000564172 NR4A2P43354 598 aa16.89■□□□□ 0.29
GDE1-203ENST00000564172 CSNK1EP49674 416 aaKnown RBP16.89■□□□□ 0.29
GDE1-203ENST00000564172 AP2S1P53680 142 aaPredicted RBP16.89■□□□□ 0.29
GDE1-203ENST00000564172 KCNK10P57789 538 aa16.89■□□□□ 0.29
GDE1-203ENST00000564172 NXPH1P58417 271 aa16.89■□□□□ 0.29
GDE1-203ENST00000564172 INAVAQ3KP66 663 aa16.89■□□□□ 0.29
GDE1-203ENST00000564172 KRT80Q6KB66 452 aa16.89■□□□□ 0.29
GDE1-203ENST00000564172 C16orf89Q6UX73 402 aa16.89■□□□□ 0.29
GDE1-203ENST00000564172 RETREG3Q86VR2 466 aa16.89■□□□□ 0.29
GDE1-203ENST00000564172 CLIP4Q8N3C7 705 aa16.89■□□□□ 0.29
GDE1-203ENST00000564172 SLC37A2Q8TED4 501 aa16.89■□□□□ 0.29
GDE1-203ENST00000564172 S100ZQ8WXG8 99 aa16.89■□□□□ 0.29
GDE1-203ENST00000564172 MARVELD3Q96A59 401 aa16.89■□□□□ 0.29
GDE1-203ENST00000564172 FCRL1Q96LA6 429 aa16.89■□□□□ 0.29
GDE1-203ENST00000564172 SRMSQ9H3Y6 488 aa16.89■□□□□ 0.29
GDE1-203ENST00000564172 SCPEP1Q9HB40 452 aa16.89■□□□□ 0.29
GDE1-203ENST00000564172 PRM3Q9NNZ6 103 aa16.89■□□□□ 0.29
GDE1-203ENST00000564172 DMRT3Q9NQL9 472 aa16.89■□□□□ 0.29
GDE1-203ENST00000564172 PRMT8Q9NR22 394 aaPredicted RBP16.89■□□□□ 0.29
GDE1-203ENST00000564172 POT1Q9NUX5 634 aa16.89■□□□□ 0.29
GDE1-203ENST00000564172 NDUFAF1Q9Y375 327 aa16.89■□□□□ 0.29
GDE1-203ENST00000564172 A0A1W2PP18 115 aa16.88■□□□□ 0.29
GDE1-203ENST00000564172 BBIP1A8MTZ0 92 aa16.88■□□□□ 0.29
GDE1-203ENST00000564172 TRIM77I1YAP6 450 aa16.88■□□□□ 0.29
GDE1-203ENST00000564172 MRASO14807 208 aa16.88■□□□□ 0.29
GDE1-203ENST00000564172 CHRM5P08912 532 aaPredicted RBP16.88■□□□□ 0.29
GDE1-203ENST00000564172 PRPS2P11908 318 aa16.88■□□□□ 0.29
GDE1-203ENST00000564172 TDGF1P13385 188 aa16.88■□□□□ 0.29
GDE1-203ENST00000564172 ACPPP15309 386 aa16.88■□□□□ 0.29
GDE1-203ENST00000564172 CCNA2P20248 432 aa16.88■□□□□ 0.29
GDE1-203ENST00000564172 UBE2IP63279 158 aaKnown RBP16.88■□□□□ 0.29
GDE1-203ENST00000564172 CSNK1G2P78368 415 aa16.88■□□□□ 0.29
GDE1-203ENST00000564172 GPR18Q14330 331 aa16.88■□□□□ 0.29
GDE1-203ENST00000564172 SF1Q15637 639 aaKnown RBP16.88■□□□□ 0.29
GDE1-203ENST00000564172 NOXRED1Q6NXP6 359 aa16.88■□□□□ 0.29
GDE1-203ENST00000564172 VN1R5Q7Z5H4 357 aa16.88■□□□□ 0.29
GDE1-203ENST00000564172 ADGRF3Q8IZF5 1079 aa16.88■□□□□ 0.29
GDE1-203ENST00000564172 OR2L3Q8NG85 312 aa16.88■□□□□ 0.29
GDE1-203ENST00000564172 VPS33AQ96AX1 596 aa16.88■□□□□ 0.29
GDE1-203ENST00000564172 EFHD1Q9BUP0 239 aa16.88■□□□□ 0.29
GDE1-203ENST00000564172 NPLQ9BXD5 320 aaPredicted RBP16.88■□□□□ 0.29
GDE1-203ENST00000564172 NANOGQ9H9S0 305 aa16.88■□□□□ 0.29
GDE1-203ENST00000564172 MRPS30Q9NP92 439 aaKnown RBP16.88■□□□□ 0.29
GDE1-203ENST00000564172 TDRD6O60522 2096 aaKnown RBP16.88■□□□□ 0.29
GDE1-203ENST00000564172 BTN3A3O00478 584 aa16.88■□□□□ 0.29
GDE1-203ENST00000564172 ANGPT2O15123 496 aa16.88■□□□□ 0.29
GDE1-203ENST00000564172 BCAT2O15382 392 aaPredicted RBP16.88■□□□□ 0.29
GDE1-203ENST00000564172 LAMTOR5O43504 91 aa16.88■□□□□ 0.29
GDE1-203ENST00000564172 TGFB1P01137 390 aa16.88■□□□□ 0.29
GDE1-203ENST00000564172 ZNF26P17031 533 aaPredicted RBP16.88■□□□□ 0.29
GDE1-203ENST00000564172 TACR1P25103 407 aa16.88■□□□□ 0.29
GDE1-203ENST00000564172 MAPK1P28482 360 aa16.88■□□□□ 0.29
GDE1-203ENST00000564172 ABATP80404 500 aa16.88■□□□□ 0.29
GDE1-203ENST00000564172 REEP5Q00765 189 aa16.88■□□□□ 0.29
GDE1-203ENST00000564172 PLCL1Q15111 1095 aa16.88■□□□□ 0.29
GDE1-203ENST00000564172 ELOCQ15369 112 aa16.88■□□□□ 0.29
GDE1-203ENST00000564172 PGAM4Q8N0Y7 254 aa16.88■□□□□ 0.29
GDE1-203ENST00000564172 NUDT8Q8WV74 236 aa16.88■□□□□ 0.29
GDE1-203ENST00000564172 DPY30Q9C005 99 aa16.88■□□□□ 0.29
GDE1-203ENST00000564172 RHBGQ9H310 441 aa16.88■□□□□ 0.29
GDE1-203ENST00000564172 SERHL2Q9H4I8 314 aa16.88■□□□□ 0.29
GDE1-203ENST00000564172 WDR41Q9HAD4 459 aa16.88■□□□□ 0.29
GDE1-203ENST00000564172 MAP10Q9P2G4 905 aa16.88■□□□□ 0.29
GDE1-203ENST00000564172 SPAG17Q6Q759 2223 aa16.87■□□□□ 0.29
GDE1-203ENST00000564172 CEP192Q8TEP8 1941 aa16.87■□□□□ 0.29
GDE1-203ENST00000564172 FEZF1A0PJY2 475 aa16.87■□□□□ 0.29
GDE1-203ENST00000564172 ISM1B1AKI9 464 aa16.87■□□□□ 0.29
GDE1-203ENST00000564172 SDC1P18827 310 aa16.87■□□□□ 0.29
GDE1-203ENST00000564172 ACSM2AQ08AH3 577 aa16.87■□□□□ 0.29
GDE1-203ENST00000564172 ACSM2BQ68CK6 577 aa16.87■□□□□ 0.29
GDE1-203ENST00000564172 WDR5BQ86VZ2 330 aa16.87■□□□□ 0.29
GDE1-203ENST00000564172 FBXL6Q8N531 539 aa16.87■□□□□ 0.29
GDE1-203ENST00000564172 CLHC1Q8NHS4 586 aa16.87■□□□□ 0.29
GDE1-203ENST00000564172 ZDHHC1Q8WTX9 485 aa16.87■□□□□ 0.29
GDE1-203ENST00000564172 CHTF18Q8WVB6 975 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms