RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 VSX2P58304 361 aaPredicted RBP11.83□□□□□ -0.51
SCAMP2-204ENST00000563829 HSF2Q03933 536 aa11.83□□□□□ -0.51
SCAMP2-204ENST00000563829 MPPE1Q53F39 396 aa11.83□□□□□ -0.51
SCAMP2-204ENST00000563829 MFSD14CQ5VZR4 134 aa11.83□□□□□ -0.51
SCAMP2-204ENST00000563829 ZNF730Q6ZMV8 503 aa11.83□□□□□ -0.51
SCAMP2-204ENST00000563829 MOB2Q70IA6 237 aa11.83□□□□□ -0.51
SCAMP2-204ENST00000563829 KANSL1Q7Z3B3 1105 aa11.83□□□□□ -0.51
SCAMP2-204ENST00000563829 LIMS2Q7Z4I7 341 aa11.83□□□□□ -0.51
SCAMP2-204ENST00000563829 C7orf57Q8NEG2 295 aa11.83□□□□□ -0.51
SCAMP2-204ENST00000563829 TCF25Q9BQ70 676 aa11.83□□□□□ -0.51
SCAMP2-204ENST00000563829 TLR8Q9NR97 1041 aaKnown RBP11.83□□□□□ -0.51
SCAMP2-204ENST00000563829 NUDT15Q9NV35 164 aa11.83□□□□□ -0.51
SCAMP2-204ENST00000563829 CUEDC1Q9NWM3 386 aaPredicted RBP11.83□□□□□ -0.51
SCAMP2-204ENST00000563829 MRPL39Q9NYK5 338 aaKnown RBP11.83□□□□□ -0.51
SCAMP2-204ENST00000563829 EXO1Q9UQ84 846 aaKnown RBP11.83□□□□□ -0.51
SCAMP2-204ENST00000563829 ZNF175Q9Y473 711 aa11.83□□□□□ -0.51
SCAMP2-204ENST00000563829 MAB21L2Q9Y586 359 aa11.83□□□□□ -0.51
SCAMP2-204ENST00000563829 PDCD11Q14690 1871 aaKnown RBP11.83□□□□□ -0.52
SCAMP2-204ENST00000563829 LGALS8O00214 317 aa11.83□□□□□ -0.52
SCAMP2-204ENST00000563829 QSOX1O00391 747 aa11.83□□□□□ -0.52
SCAMP2-204ENST00000563829 KHNYNO15037 678 aaKnown RBP11.83□□□□□ -0.52
SCAMP2-204ENST00000563829 ZNF623O75123 536 aa11.83□□□□□ -0.52
SCAMP2-204ENST00000563829 PAHP00439 452 aa11.83□□□□□ -0.52
SCAMP2-204ENST00000563829 HLA-DQB1P01920 261 aa11.83□□□□□ -0.52
SCAMP2-204ENST00000563829 RPS25P62851 125 aaKnown RBP11.83□□□□□ -0.52
SCAMP2-204ENST00000563829 PPP3R1P63098 170 aa11.83□□□□□ -0.52
SCAMP2-204ENST00000563829 CSTF1Q05048 431 aaKnown RBP11.83□□□□□ -0.52
SCAMP2-204ENST00000563829 TNFAIP1Q13829 316 aa11.83□□□□□ -0.52
SCAMP2-204ENST00000563829 TTLL4Q14679 1199 aa11.83□□□□□ -0.52
SCAMP2-204ENST00000563829 IGSF11Q5DX21 431 aa11.83□□□□□ -0.52
SCAMP2-204ENST00000563829 ATAT1Q5SQI0 421 aa11.83□□□□□ -0.52
SCAMP2-204ENST00000563829 FAM92BQ6ZTR7 304 aa11.83□□□□□ -0.52
SCAMP2-204ENST00000563829 KIAA0907Q7Z7F0 614 aaPredicted RBP11.83□□□□□ -0.52
SCAMP2-204ENST00000563829 DDX53Q86TM3 631 aaKnown RBP11.83□□□□□ -0.52
SCAMP2-204ENST00000563829 RNF175Q8N4F7 328 aa11.83□□□□□ -0.52
SCAMP2-204ENST00000563829 LINC00469Q8N7U9 141 aa11.83□□□□□ -0.52
SCAMP2-204ENST00000563829 MDGA1Q8NFP4 955 aa11.83□□□□□ -0.52
SCAMP2-204ENST00000563829 GIMAP1Q8WWP7 306 aa11.83□□□□□ -0.52
SCAMP2-204ENST00000563829 TM9SF4Q92544 642 aa11.83□□□□□ -0.52
SCAMP2-204ENST00000563829 B3GALNT1O75752 331 aa11.83□□□□□ -0.52
SCAMP2-204ENST00000563829 GASTP01350 101 aa11.83□□□□□ -0.52
SCAMP2-204ENST00000563829 ZNF140P52738 457 aaPredicted RBP11.83□□□□□ -0.52
SCAMP2-204ENST00000563829 CRISP1P54107 249 aa11.83□□□□□ -0.52
SCAMP2-204ENST00000563829 DCDC1P59894 354 aa11.83□□□□□ -0.52
SCAMP2-204ENST00000563829 PUDPQ08623 228 aa11.83□□□□□ -0.52
SCAMP2-204ENST00000563829 GPR176Q14439 515 aa11.83□□□□□ -0.52
SCAMP2-204ENST00000563829 LRFN4Q6PJG9 635 aa11.83□□□□□ -0.52
SCAMP2-204ENST00000563829 RASSF6Q6ZTQ3 369 aa11.83□□□□□ -0.52
SCAMP2-204ENST00000563829 WDR53Q7Z5U6 358 aaPredicted RBP11.83□□□□□ -0.52
SCAMP2-204ENST00000563829 NANOGP1Q8N7R0 232 aa11.83□□□□□ -0.52
SCAMP2-204ENST00000563829 ZFP41Q8N8Y5 198 aa11.83□□□□□ -0.52
SCAMP2-204ENST00000563829 ARRDC4Q8NCT1 418 aa11.83□□□□□ -0.52
SCAMP2-204ENST00000563829 AGBL3Q8NEM8 1001 aa11.83□□□□□ -0.52
SCAMP2-204ENST00000563829 MYLPFQ96A32 169 aa11.83□□□□□ -0.52
SCAMP2-204ENST00000563829 APIPQ96GX9 242 aa11.83□□□□□ -0.52
SCAMP2-204ENST00000563829 CCSER2Q9H7U1 834 aa11.83□□□□□ -0.52
SCAMP2-204ENST00000563829 SDHAF2Q9NX18 166 aa11.83□□□□□ -0.52
SCAMP2-204ENST00000563829 BAIAP2Q9UQB8 552 aa11.83□□□□□ -0.52
SCAMP2-204ENST00000563829 FKBP7Q9Y680 259 aa11.83□□□□□ -0.52
SCAMP2-204ENST00000563829 ANKRD36A6QL64 1941 aa11.82□□□□□ -0.52
SCAMP2-204ENST00000563829 C19orf81C9J6K1 198 aa11.82□□□□□ -0.52
SCAMP2-204ENST00000563829 TLR4O00206 839 aa11.82□□□□□ -0.52
SCAMP2-204ENST00000563829 DHFRP00374 187 aa11.82□□□□□ -0.52
SCAMP2-204ENST00000563829 PLATP00750 562 aa11.82□□□□□ -0.52
SCAMP2-204ENST00000563829 COX7A2P14406 83 aa11.82□□□□□ -0.52
SCAMP2-204ENST00000563829 ACVRL1P37023 503 aa11.82□□□□□ -0.52
SCAMP2-204ENST00000563829 RPL35P42766 123 aaKnown RBP11.82□□□□□ -0.52
SCAMP2-204ENST00000563829 STK19P49842 368 aaPredicted RBP11.82□□□□□ -0.52
SCAMP2-204ENST00000563829 PTPN5P54829 565 aa11.82□□□□□ -0.52
SCAMP2-204ENST00000563829 RBBP4Q09028 425 aa11.82□□□□□ -0.52
SCAMP2-204ENST00000563829 MLLT11Q13015 90 aaPredicted RBP11.82□□□□□ -0.52
SCAMP2-204ENST00000563829 BAMBIQ13145 260 aa11.82□□□□□ -0.52
SCAMP2-204ENST00000563829 ARHGEF7Q14155 803 aa11.82□□□□□ -0.52
SCAMP2-204ENST00000563829 ARTNQ5T4W7 220 aa11.82□□□□□ -0.52
SCAMP2-204ENST00000563829 KRT74Q7RTS7 529 aa11.82□□□□□ -0.52
SCAMP2-204ENST00000563829 FAM46DQ8NEK8 389 aa11.82□□□□□ -0.52
SCAMP2-204ENST00000563829 BEST4Q8NFU0 473 aa11.82□□□□□ -0.52
SCAMP2-204ENST00000563829 KCNJ9Q92806 393 aa11.82□□□□□ -0.52
SCAMP2-204ENST00000563829 ZNF416Q9BWM5 594 aa11.82□□□□□ -0.52
SCAMP2-204ENST00000563829 ARHGAP39Q9C0H5 1083 aa11.82□□□□□ -0.52
SCAMP2-204ENST00000563829 KCMF1Q9P0J7 381 aa11.82□□□□□ -0.52
SCAMP2-204ENST00000563829 HCN3Q9P1Z3 774 aa11.82□□□□□ -0.52
SCAMP2-204ENST00000563829 ADAM30Q9UKF2 790 aa11.82□□□□□ -0.52
SCAMP2-204ENST00000563829 SPATA2Q9UM82 520 aa11.82□□□□□ -0.52
SCAMP2-204ENST00000563829 KCNMB2Q9Y691 235 aa11.82□□□□□ -0.52
SCAMP2-204ENST00000563829 NINQ8N4C6 2090 aa11.82□□□□□ -0.52
SCAMP2-204ENST00000563829 A0A1B0GVC2 190 aa11.82□□□□□ -0.52
SCAMP2-204ENST00000563829 hCG_1807616A0A1W2PRN6 198 aa11.82□□□□□ -0.52
SCAMP2-204ENST00000563829 A6NIN4 97 aa11.82□□□□□ -0.52
SCAMP2-204ENST00000563829 TMEM229AB2RXF0 380 aa11.82□□□□□ -0.52
SCAMP2-204ENST00000563829 H3BN98 237 aa11.82□□□□□ -0.52
SCAMP2-204ENST00000563829 EPB42P16452 691 aa11.82□□□□□ -0.52
SCAMP2-204ENST00000563829 DNASE1P24855 282 aa11.82□□□□□ -0.52
SCAMP2-204ENST00000563829 TTPAP49638 278 aa11.82□□□□□ -0.52
SCAMP2-204ENST00000563829 RAB8AP61006 207 aa11.82□□□□□ -0.52
SCAMP2-204ENST00000563829 SELENOWP63302 87 aa11.82□□□□□ -0.52
SCAMP2-204ENST00000563829 B3GLCTQ6Y288 498 aa11.82□□□□□ -0.52
SCAMP2-204ENST00000563829 GPR155Q7Z3F1 870 aa11.82□□□□□ -0.52
SCAMP2-204ENST00000563829 LAPTM4BQ86VI4 370 aa11.82□□□□□ -0.52
SCAMP2-204ENST00000563829 OR7G3Q8NG95 312 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms