RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 CYP4F3Q08477 520 aa9.23□□□□□ -0.93
UBFD1-202ENST00000563366 C2orf80Q0P641 193 aa9.23□□□□□ -0.93
UBFD1-202ENST00000563366 SLC9A5Q14940 896 aa9.23□□□□□ -0.93
UBFD1-202ENST00000563366 SUZ12Q15022 739 aaKnown RBP9.23□□□□□ -0.93
UBFD1-202ENST00000563366 C14orf28Q4W4Y0 310 aa9.23□□□□□ -0.93
UBFD1-202ENST00000563366 ZC3H12BQ5HYM0 836 aaKnown RBP9.23□□□□□ -0.93
UBFD1-202ENST00000563366 IRAK1BP1Q5VVH5 260 aa9.23□□□□□ -0.93
UBFD1-202ENST00000563366 OR4F3Q6IEY1 312 aa9.23□□□□□ -0.93
UBFD1-202ENST00000563366 FAM71E1Q6IPT2 247 aa9.23□□□□□ -0.93
UBFD1-202ENST00000563366 LCN8Q6JVE9 175 aa9.23□□□□□ -0.93
UBFD1-202ENST00000563366 NIPAL1Q6NVV3 410 aa9.23□□□□□ -0.93
UBFD1-202ENST00000563366 OGFOD3Q6PK18 319 aa9.23□□□□□ -0.93
UBFD1-202ENST00000563366 FIGLAQ6QHK4 219 aa9.23□□□□□ -0.93
UBFD1-202ENST00000563366 RNF44Q7L0R7 432 aa9.23□□□□□ -0.93
UBFD1-202ENST00000563366 ASPGQ86U10 573 aa9.23□□□□□ -0.93
UBFD1-202ENST00000563366 C17orf82Q86X59 251 aaPredicted RBP9.23□□□□□ -0.93
UBFD1-202ENST00000563366 PROSER1Q86XN7 944 aa9.23□□□□□ -0.93
UBFD1-202ENST00000563366 TMEM126BQ8IUX1 230 aa9.23□□□□□ -0.93
UBFD1-202ENST00000563366 AQP12AQ8IXF9 295 aa9.23□□□□□ -0.93
UBFD1-202ENST00000563366 ZCCHC7Q8N3Z6 543 aaKnown RBP9.23□□□□□ -0.93
UBFD1-202ENST00000563366 ARL14Q8N4G2 192 aa9.23□□□□□ -0.93
UBFD1-202ENST00000563366 RNF148Q8N7C7 305 aa9.23□□□□□ -0.93
UBFD1-202ENST00000563366 BHLHE22Q8NFJ8 381 aaPredicted RBP9.23□□□□□ -0.93
UBFD1-202ENST00000563366 FLVCR1-AS1Q8TAF5 88 aa9.23□□□□□ -0.93
UBFD1-202ENST00000563366 BAHD1Q8TBE0 780 aaPredicted RBP9.23□□□□□ -0.93
UBFD1-202ENST00000563366 GFM2Q969S9 779 aaKnown RBP9.23□□□□□ -0.93
UBFD1-202ENST00000563366 PPM1MQ96MI6 270 aa9.23□□□□□ -0.93
UBFD1-202ENST00000563366 F2RL3Q96RI0 385 aa9.23□□□□□ -0.93
UBFD1-202ENST00000563366 CD180Q99467 661 aa9.23□□□□□ -0.93
UBFD1-202ENST00000563366 THUMPD3Q9BV44 507 aaKnown RBP9.23□□□□□ -0.93
UBFD1-202ENST00000563366 SPATA9Q9BWV2 254 aa9.23□□□□□ -0.93
UBFD1-202ENST00000563366 PAIP1Q9H074 479 aaKnown RBP9.23□□□□□ -0.93
UBFD1-202ENST00000563366 RAB33BQ9H082 229 aa9.23□□□□□ -0.93
UBFD1-202ENST00000563366 RAD21L1Q9H4I0 556 aa9.23□□□□□ -0.93
UBFD1-202ENST00000563366 CD320Q9NPF0 282 aa9.23□□□□□ -0.93
UBFD1-202ENST00000563366 LYARQ9NX58 379 aaKnown RBP9.23□□□□□ -0.93
UBFD1-202ENST00000563366 EHD3Q9NZN3 535 aa9.23□□□□□ -0.93
UBFD1-202ENST00000563366 SH3BP4Q9P0V3 963 aa9.23□□□□□ -0.93
UBFD1-202ENST00000563366 VPS4AQ9UN37 437 aa9.23□□□□□ -0.93
UBFD1-202ENST00000563366 SNX13Q9Y5W8 968 aa9.23□□□□□ -0.93
UBFD1-202ENST00000563366 GMEB1Q9Y692 573 aa9.23□□□□□ -0.93
UBFD1-202ENST00000563366 SLCO1B1Q9Y6L6 691 aa9.23□□□□□ -0.93
UBFD1-202ENST00000563366 ABCA7Q8IZY2 2146 aa9.22□□□□□ -0.93
UBFD1-202ENST00000563366 A0A096LPE4 126 aa9.22□□□□□ -0.93
UBFD1-202ENST00000563366 TRBV5-3A0A0A0MS03 114 aa9.22□□□□□ -0.93
UBFD1-202ENST00000563366 A0A1W2PPZ6 126 aa9.22□□□□□ -0.93
UBFD1-202ENST00000563366 GABRR3A8MPY1 467 aa9.22□□□□□ -0.93
UBFD1-202ENST00000563366 RHPN2P1A8MT19 583 aa9.22□□□□□ -0.93
UBFD1-202ENST00000563366 H0Y3Z8 333 aa9.22□□□□□ -0.93
UBFD1-202ENST00000563366 ERI3O43414 337 aaKnown RBP9.22□□□□□ -0.93
UBFD1-202ENST00000563366 NUDT21O43809 227 aaKnown RBP9.22□□□□□ -0.93
UBFD1-202ENST00000563366 LCMT2O60294 686 aaKnown RBP9.22□□□□□ -0.93
UBFD1-202ENST00000563366 NOBOXO60393 691 aa9.22□□□□□ -0.93
UBFD1-202ENST00000563366 KRT36O76013 467 aa9.22□□□□□ -0.93
UBFD1-202ENST00000563366 SCELO95171 688 aa9.22□□□□□ -0.93
UBFD1-202ENST00000563366 TBX6O95947 436 aaPredicted RBP9.22□□□□□ -0.93
UBFD1-202ENST00000563366 PROS1P07225 676 aa9.22□□□□□ -0.93
UBFD1-202ENST00000563366 C8BP07358 591 aa9.22□□□□□ -0.93
UBFD1-202ENST00000563366 IL3P08700 152 aa9.22□□□□□ -0.93
UBFD1-202ENST00000563366 ALPPL2P10696 532 aa9.22□□□□□ -0.93
UBFD1-202ENST00000563366 HIST1H1TP22492 207 aaPredicted RBP9.22□□□□□ -0.93
UBFD1-202ENST00000563366 CTSKP43235 329 aa9.22□□□□□ -0.93
UBFD1-202ENST00000563366 GSK3BP49841 420 aa9.22□□□□□ -0.93
UBFD1-202ENST00000563366 RHDQ02161 417 aa9.22□□□□□ -0.93
UBFD1-202ENST00000563366 CSTF1Q05048 431 aaKnown RBP9.22□□□□□ -0.93
UBFD1-202ENST00000563366 DMWDQ09019 674 aa9.22□□□□□ -0.93
UBFD1-202ENST00000563366 ABHD18Q0P651 414 aa9.22□□□□□ -0.93
UBFD1-202ENST00000563366 CCNIQ14094 377 aa9.22□□□□□ -0.93
UBFD1-202ENST00000563366 FXNQ16595 210 aa9.22□□□□□ -0.93
UBFD1-202ENST00000563366 ZNF528Q3MIS6 628 aa9.22□□□□□ -0.93
UBFD1-202ENST00000563366 RUNDC3AQ59EK9 446 aa9.22□□□□□ -0.93
UBFD1-202ENST00000563366 RABL3Q5HYI8 236 aa9.22□□□□□ -0.93
UBFD1-202ENST00000563366 TOR1AIP1Q5JTV8 583 aa9.22□□□□□ -0.93
UBFD1-202ENST00000563366 ERICH5Q6P6B1 374 aa9.22□□□□□ -0.93
UBFD1-202ENST00000563366 ABHD17CQ6PCB6 329 aa9.22□□□□□ -0.93
UBFD1-202ENST00000563366 ABHD13Q7L211 337 aa9.22□□□□□ -0.93
UBFD1-202ENST00000563366 SPATA24Q86W54 205 aa9.22□□□□□ -0.93
UBFD1-202ENST00000563366 PLD3Q8IV08 490 aa9.22□□□□□ -0.93
UBFD1-202ENST00000563366 ARL10Q8N8L6 244 aa9.22□□□□□ -0.93
UBFD1-202ENST00000563366 OR2T12Q8NG77 320 aa9.22□□□□□ -0.93
UBFD1-202ENST00000563366 OR7A2PQ8NGA2 310 aa9.22□□□□□ -0.93
UBFD1-202ENST00000563366 OR6C4Q8NGE1 309 aa9.22□□□□□ -0.93
UBFD1-202ENST00000563366 GOT1L1Q8NHS2 421 aaPredicted RBP9.22□□□□□ -0.93
UBFD1-202ENST00000563366 WDR48Q8TAF3 677 aa9.22□□□□□ -0.93
UBFD1-202ENST00000563366 CEP76Q8TAP6 659 aa9.22□□□□□ -0.93
UBFD1-202ENST00000563366 JPH3Q8WXH2 748 aaPredicted RBP9.22□□□□□ -0.93
UBFD1-202ENST00000563366 MS4A6EQ96DS6 147 aa9.22□□□□□ -0.93
UBFD1-202ENST00000563366 FAM120BQ96EK7 910 aaKnown RBP9.22□□□□□ -0.93
UBFD1-202ENST00000563366 ZC3H10Q96K80 434 aaKnown RBP9.22□□□□□ -0.93
UBFD1-202ENST00000563366 ELF4Q99607 663 aaPredicted RBP9.22□□□□□ -0.93
UBFD1-202ENST00000563366 NRTNQ99748 197 aa9.22□□□□□ -0.93
UBFD1-202ENST00000563366 C17orf62Q9BQA9 187 aa9.22□□□□□ -0.93
UBFD1-202ENST00000563366 DUSP23Q9BVJ7 150 aa9.22□□□□□ -0.93
UBFD1-202ENST00000563366 ZNF717Q9BY31 904 aaPredicted RBP9.22□□□□□ -0.93
UBFD1-202ENST00000563366 SEMA6CQ9H3T2 930 aa9.22□□□□□ -0.93
UBFD1-202ENST00000563366 S100A14Q9HCY8 104 aa9.22□□□□□ -0.93
UBFD1-202ENST00000563366 SERHLQ9NQF3 203 aa9.22□□□□□ -0.93
UBFD1-202ENST00000563366 C1GALT1Q9NS00 363 aa9.22□□□□□ -0.93
UBFD1-202ENST00000563366 CMTM6Q9NX76 183 aa9.22□□□□□ -0.93
UBFD1-202ENST00000563366 MS4A12Q9NXJ0 267 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms